mRNA_P-wetherbeei_contig54511.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54511.1.1
Unique NamemRNA_P-wetherbeei_contig54511.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A7V3XI74_9BACT (Amidohydrolase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V3XI74_9BACT)

HSP 1 Score: 229 bits (583), Expect = 5.260e-70
Identity = 105/176 (59.66%), Postives = 134/176 (76.14%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P+ETS+A  R +   WPFDRD +RP + PTIPLHCSD+F+VA   +ARE  +  QTHLAE+K QAV+ RA+YGK++ AHL DLG LGP FS AHG+W+DR ++  +A  G  ++HNP SNLRLGSG+A VR MLDAG+ VGIGTD  ++ D QN+FE  RLAAYLSR++ PDY +W
Sbjct:  185 PWETSIAACRELLRAWPFDRDRVRPALGPTIPLHCSDEFLVACRDLAREHDVALQTHLAESKTQAVVGRARYGKTLAAHLGDLGLLGPRFSAAHGVWLDRDDVRRLADAGAGVSHNPLSNLRLGSGIAPVRMMLDAGLRVGIGTDSASSADAQNMFECVRLAAYLSRVRTPDYERW 360          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A3N5MXJ2_9PROT (Amidohydrolase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5MXJ2_9PROT)

HSP 1 Score: 228 bits (582), Expect = 8.160e-70
Identity = 112/176 (63.64%), Postives = 130/176 (73.86%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P+  SL   R +  +W FDRD IRP + PTIPLHCSDDF+V    +AREF +  QTHLAE+  QA +AR +YG S+TAHL  LG LG  FS AH IWIDR +M  IA  GG IAHNP SNLRLGSG+AAVR ML+ G+ VGIGTD TNT D QN+FEA RLAAYLSRL+G DYA+W
Sbjct:  188 PWAESLKACRTILHNWSFDRDAIRPALGPTIPLHCSDDFLVGCRDLAREFDVGLQTHLAESATQAAVARQRYGTSLTAHLAKLGVLGERFSAAHAIWIDRDDMQRIADAGGAIAHNPLSNLRLGSGLAAVRAMLECGLAVGIGTDATNTSDTQNMFEAARLAAYLSRLRGTDYAQW 363          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A1F4FIL9_9PROT (Amidohydrolase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FIL9_9PROT)

HSP 1 Score: 228 bits (580), Expect = 1.310e-69
Identity = 100/176 (56.82%), Postives = 136/176 (77.27%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            PY T+L ++R     W FDRD +RP +APTIPLHCSD+F+VA AR+AREFG+   TH++E+KVQA+    KYGK++TAH+D LG +GP+F+ AHG+W+D  +M  +A RG  +AHNPGSN+RLGSG+A +R MLD G+ VGIGTDG N  D  N++EA RLA+ +S++QGPD+ +W
Sbjct:  176 PYRTTLEHMRKALQAWKFDRDEVRPAVAPTIPLHCSDEFMVACARLAREFGVGLHTHVSESKVQAIAGLKKYGKTLTAHMDALGLVGPDFTAAHGVWLDDDDMKRLADRGASVAHNPGSNMRLGSGLADMRRMLDHGVNVGIGTDGANCSDNLNMYEAMRLASLVSKVQGPDWQRW 351          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A521Z5C1_9PROT (Amidohydrolase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z5C1_9PROT)

HSP 1 Score: 225 bits (574), Expect = 1.030e-68
Identity = 100/176 (56.82%), Postives = 136/176 (77.27%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P+ TSL +LR     W FDRD +RP +APTIPLHCSD+F+VA AR+AREFG+   TH++E+KVQAV    KYG+++TAHLD LG +GP+F+ AHG+W+D  +M  +A RG  +AHNPGSN+RLGSG+A +R ML+ G+ VGIGTDG N  D  N++EA RLA+ +S++QGP++ +W
Sbjct:  176 PWPTSLEHLRRALQGWKFDRDEVRPAVAPTIPLHCSDEFMVACARLAREFGVGLHTHVSESKVQAVAGLKKYGRTLTAHLDSLGLVGPDFTAAHGVWLDDEDMQRLAGRGASVAHNPGSNMRLGSGLADMRRMLEHGVNVGIGTDGANCSDNLNMYEAMRLASLVSKVQGPEWQRW 351          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A831Y4V2_9BACT (Amidohydrolase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A831Y4V2_9BACT)

HSP 1 Score: 219 bits (559), Expect = 2.040e-66
Identity = 101/177 (57.06%), Postives = 131/177 (74.01%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYG-KSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P++ S+A  R +  DWPFDRD +RPG+ PTIPLHC+D+F+VA   +ARE  +P Q HLAE+K QAVL   KYG K++ AHL  LG L P FSGAHG+W+ R ++  +A  G  +AHNP SNLRLG+G+A VR MLDAG+ VG+GTD  ++ D QN+FE  RLAAYLSR++ PDY +W
Sbjct:  185 PWQASIAACRQMLKDWPFDRDQVRPGLGPTIPLHCTDEFLVACGDLAREHDVPVQIHLAESKTQAVLGPVKYGGKTLAAHLGGLGLLNPRFSGAHGVWLTRDDVRRLADAGAAVAHNPMSNLRLGNGIAPVRMMLDAGLRVGVGTDSASSADAQNMFECVRLAAYLSRVRTPDYTRW 361          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A1Q7ELY7_9BACT (Amidohydro-rel domain-containing protein n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7ELY7_9BACT)

HSP 1 Score: 219 bits (557), Expect = 3.960e-66
Identity = 101/176 (57.39%), Postives = 131/176 (74.43%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P+E S+   R +   WPFDR  +RP + PTIPLHCSD+F+ A   +AREF +  QTHLAE++ QAVL R KYGK++TAHL DLG LGP FSGAH IW++  ++  +A  G  +AHNP SNLRLGSGVA VR+ML+ G+ VG+GTD  ++ D QN+FEATRLA+YLSR++ PD  +W
Sbjct:  186 PWEASIEACRGILRTWPFDRARVRPALGPTIPLHCSDEFLRACRDLAREFDVGLQTHLAESRAQAVLGRKKYGKTLTAHLGDLGLLGPRFSGAHAIWLEPDDVTRLADAGASVAHNPLSNLRLGSGVAPVRQMLEGGLRVGVGTDSASSSDTQNMFEATRLASYLSRIRTPDSGRW 361          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: UPI001BCB05DF (amidohydrolase n=1 Tax=Bradyrhizobium sp. dw_411 TaxID=2720082 RepID=UPI001BCB05DF)

HSP 1 Score: 217 bits (552), Expect = 2.460e-65
Identity = 99/176 (56.25%), Postives = 129/176 (73.30%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            PY+ S   L  ++ DWPFDR+ IRP IAPTIPLHCSD+F+V    +AR++ LP QTHLAETK QA++   KYG+++TAHLD LG LGP+FS AH IW+DR ++  ++  G  I H P SN+R GSG+A +R  LD GI VGI TD TN+ D  N+FE+TRLAA +SR+Q PD+ +W
Sbjct:  187 PYQASADALEAIYQDWPFDRELIRPAIAPTIPLHCSDEFLVRCRDLARDYELPLQTHLAETKSQAIIGLRKYGRTLTAHLDQLGMLGPHFSAAHAIWLDRDDLGRLSDNGASIVHAPVSNMRFGSGLAHLRPALDRGINVGIATDATNSSDQLNMFESTRLAALISRVQTPDFEQW 362          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A537W0U1_9PROT (Amidohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537W0U1_9PROT)

HSP 1 Score: 216 bits (549), Expect = 6.280e-65
Identity = 98/176 (55.68%), Postives = 132/176 (75.00%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P E +LA  R   ADW FDR  +RP IAPTIP HCSD+FI   A +AR+FG+   +H+AE+KVQA+     YGK++TAHLD+LG LGP+F+ AHG+W+D  +M  +  RG  IAHNPGSN+RLG+G+A  R MLDAG+ +GIGTDG N  D QN++EA RLA+++S++QGP++ +W
Sbjct:  184 PGEATLAAARAALADWSFDRGRVRPAIAPTIPHHCSDEFIRGCAALARDFGVGLHSHVAESKVQALAGIKLYGKTLTAHLDELGILGPDFTVAHGVWLDNDDMKRLGDRGASIAHNPGSNMRLGAGLADSRAMLDAGVNLGIGTDGANCSDNQNMYEAMRLASFVSKVQGPEWRRW 359          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A3D1RT13_9GAMM (Amidohydro-rel domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D1RT13_9GAMM)

HSP 1 Score: 209 bits (531), Expect = 3.860e-64
Identity = 94/176 (53.41%), Postives = 125/176 (71.02%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            P E++    R +   WPFDR  I P +APTIPLHCSD+F+  + ++A EF +    HLAE+K+Q +     YGKS+TAHLD++G LGP+F+ AH +W+D  ++  +A  G  +AHNPGSN+RLGSGVA VREMLDAG+ VGIGTDG +  D QN+FEA RLA++ SRL+  DY  W
Sbjct:    5 PAESTFKTCRELLQRWPFDRQRIAPALAPTIPLHCSDEFLTTARQLANEFEVGLHMHLAESKIQVLSGLRSYGKSLTAHLDEIGVLGPDFTAAHAVWLDPEDITRLAAHGASVAHNPGSNMRLGSGVAPVREMLDAGLNVGIGTDGAHCADNQNMFEALRLASFASRLRSHDYRDW 180          
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Match: A0A2S6U6S6_9PROT (8-oxoguanine deaminase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin2 TaxID=2013068 RepID=A0A2S6U6S6_9PROT)

HSP 1 Score: 209 bits (533), Expect = 1.610e-62
Identity = 94/176 (53.41%), Postives = 126/176 (71.59%), Query Frame = 1
Query:    1 PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREFGLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDRAEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTGDGQNIFEATRLAAYLSRLQGPDYAKW 528
            PY TSLAN+R     W  D D  R  +APTIPLHCSDDF+ A A++AREFG+   +H+AE+K+QA+    +YGKS+TAHLDD+G LGP+F+ AHG+W+D  +   +   G  +AHNPGSN+RLGSG+A  R ML+  + +GIGTDG N  D  N+FEA R+A+ +S++QGPD   W
Sbjct:  187 PYRTSLANMRKALRGWSVDTDLTRLAVAPTIPLHCSDDFMKACAKLAREFGVGLHSHVAESKIQAISGLRRYGKSLTAHLDDIGLLGPDFTVAHGVWLDDDDCRRLGDHGASVAHNPGSNMRLGSGLADARGMLNGNVNLGIGTDGANCSDNLNMFEAMRIASMVSKVQGPDQRVW 362          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54511.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V3XI74_9BACT5.260e-7059.66Amidohydrolase n=1 Tax=Candidatus Rokubacteria bac... [more]
A0A3N5MXJ2_9PROT8.160e-7063.64Amidohydrolase n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A1F4FIL9_9PROT1.310e-6956.82Amidohydrolase n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A521Z5C1_9PROT1.030e-6856.82Amidohydrolase n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A831Y4V2_9BACT2.040e-6657.06Amidohydrolase n=1 Tax=Candidatus Rokubacteria bac... [more]
A0A1Q7ELY7_9BACT3.960e-6657.39Amidohydro-rel domain-containing protein n=2 Tax=u... [more]
UPI001BCB05DF2.460e-6556.25amidohydrolase n=1 Tax=Bradyrhizobium sp. dw_411 T... [more]
A0A537W0U1_9PROT6.280e-6555.68Amidohydrolase n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A3D1RT13_9GAMM3.860e-6453.41Amidohydro-rel domain-containing protein n=1 Tax=G... [more]
A0A2S6U6S6_9PROT1.610e-6253.418-oxoguanine deaminase n=1 Tax=Alphaproteobacteria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54511contigP-wetherbeei_contig54511:2..529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog391589.RGAI101_1723
PFAMsAmidohydro_1
Model size528
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.68e-62
EggNOG OGsCOG0402@1|root,COG0402@2|Bacteria,1MVPA@1224|Proteobacteria,2TSZ0@28211|Alphaproteobacteria,2P4CK@2433|Roseobacter
DescriptionAmidohydrolase family
Cds size528
COG categoryF
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186814.6110823-CDS-P-wetherbeei_contig54511:1..5291683186814.6110823-CDS-P-wetherbeei_contig54511:1..529Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54511 2..529 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54511.1.1prot_P-wetherbeei_contig54511.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54511 2..529 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54511.1.1

>prot_P-wetherbeei_contig54511.1.1 ID=prot_P-wetherbeei_contig54511.1.1|Name=mRNA_P-wetherbeei_contig54511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
PYETSLANLRPVFADWPFDRDFIRPGIAPTIPLHCSDDFIVASARMAREF
GLPFQTHLAETKVQAVLARAKYGKSMTAHLDDLGALGPNFSGAHGIWIDR
AEMDLIAKRGGRIAHNPGSNLRLGSGVAAVREMLDAGIEVGIGTDGTNTG
DGQNIFEATRLAAYLSRLQGPDYAKW
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mRNA from alignment at P-wetherbeei_contig54511:2..529-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54511.1.1 ID=mRNA_P-wetherbeei_contig54511.1.1|Name=mRNA_P-wetherbeei_contig54511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54511:2..529- (Phaeothamnion wetherbeei SAG_119_79)
CCGTACGAGACCAGCCTTGCCAATCTCCGGCCGGTCTTCGCCGACTGGCC GTTCGACCGCGACTTCATCCGGCCGGGCATCGCGCCGACCATCCCTCTGC ACTGCTCGGACGATTTCATCGTCGCAAGTGCGAGGATGGCGCGCGAGTTC GGCCTGCCGTTCCAGACGCATCTCGCCGAGACCAAGGTGCAGGCGGTGCT CGCCCGCGCCAAGTACGGCAAGAGCATGACGGCGCATCTCGACGATCTGG GCGCACTCGGTCCGAATTTCAGCGGCGCCCACGGCATCTGGATCGACCGG GCCGAGATGGACCTGATCGCCAAGCGCGGCGGGCGCATCGCGCACAACCC GGGCAGCAACCTGCGCCTCGGCTCGGGCGTGGCTGCGGTGCGCGAGATGC TGGATGCGGGCATCGAGGTCGGCATCGGCACTGACGGCACGAACACCGGC GACGGGCAGAACATCTTCGAGGCGACCCGGCTTGCGGCTTATCTCTCGCG CCTGCAGGGACCCGACTACGCGAAGTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54511:2..529-

>mRNA_P-wetherbeei_contig54511.1.1 ID=mRNA_P-wetherbeei_contig54511.1.1|Name=mRNA_P-wetherbeei_contig54511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54511:2..529- (Phaeothamnion wetherbeei SAG_119_79)
CCGTACGAGACCAGCCTTGCCAATCTCCGGCCGGTCTTCGCCGACTGGCC
GTTCGACCGCGACTTCATCCGGCCGGGCATCGCGCCGACCATCCCTCTGC
ACTGCTCGGACGATTTCATCGTCGCAAGTGCGAGGATGGCGCGCGAGTTC
GGCCTGCCGTTCCAGACGCATCTCGCCGAGACCAAGGTGCAGGCGGTGCT
CGCCCGCGCCAAGTACGGCAAGAGCATGACGGCGCATCTCGACGATCTGG
GCGCACTCGGTCCGAATTTCAGCGGCGCCCACGGCATCTGGATCGACCGG
GCCGAGATGGACCTGATCGCCAAGCGCGGCGGGCGCATCGCGCACAACCC
GGGCAGCAACCTGCGCCTCGGCTCGGGCGTGGCTGCGGTGCGCGAGATGC
TGGATGCGGGCATCGAGGTCGGCATCGGCACTGACGGCACGAACACCGGC
GACGGGCAGAACATCTTCGAGGCGACCCGGCTTGCGGCTTATCTCTCGCG
CCTGCAGGGACCCGACTACGCGAAGTGG
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