mRNA_P-wetherbeei_contig54502.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54502.1.1
Unique NamemRNA_P-wetherbeei_contig54502.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: A0A7X0AL67_9GAMM (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=2 Tax=unclassified Rhodanobacter TaxID=2621553 RepID=A0A7X0AL67_9GAMM)

HSP 1 Score: 247 bits (630), Expect = 2.740e-80
Identity = 120/165 (72.73%), Postives = 138/165 (83.64%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FD+L+NNAGTGLHA + ETTE +FD L ++HFK VFFLT +L+P + DGGRI+NISSGLARF +PGS AYAA+KGAVEVL+RYQAKE GAR I VN VAPGAIETDFR GAVRDNPE+ KM+AS T LGR GLPDDIGG I+ LL+  N W+ AQRIE SGGMFI
Sbjct:   89 FDFLVNNAGTGLHASIAETTEAEFDELVNVHFKGVFFLTQKLLPLIADGGRIVNISSGLARFTLPGSSAYAAVKGAVEVLTRYQAKELGARWIAVNTVAPGAIETDFRDGAVRDNPEIKKMIASQTALGRTGLPDDIGGLIALLLLPANGWINAQRIEASGGMFI 253
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: A0A6P0QKI7_9CYAN (SDR family oxidoreductase n=1 Tax=Microcoleus sp. SIO2G3 TaxID=2607795 RepID=A0A6P0QKI7_9CYAN)

HSP 1 Score: 247 bits (630), Expect = 2.930e-80
Identity = 117/165 (70.91%), Postives = 140/165 (84.85%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FD+L+NNAG G+HAP  ETTEE+F+ L +IH K VFFLT +L+P + DGGRI+NISSGLARF +PG  AY AMKGA+EVL+RY AKE G R+I VNV+APGAIETDF  G+VRDNPE+NK +AS T LGRVGLPDDIGGAI++LL +ENRW+ AQRIEVSGGMF+
Sbjct:   91 FDFLVNNAGIGIHAPFAETTEEEFERLMNIHVKGVFFLTQKLLPLLKDGGRIVNISSGLARFVLPGYAAYGAMKGAIEVLTRYMAKELGHRQIAVNVIAPGAIETDFTNGSVRDNPEINKFIASQTALGRVGLPDDIGGAIASLLSEENRWVNAQRIEVSGGMFL 255
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: A0A2S5C986_9ENTR (KR domain-containing protein n=6 Tax=Lelliottia TaxID=1330545 RepID=A0A2S5C986_9ENTR)

HSP 1 Score: 246 bits (629), Expect = 3.770e-80
Identity = 120/165 (72.73%), Postives = 138/165 (83.64%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FDYL+NNAGTGL+AP  ETTE QFD   ++HFK  FFLT +L+P + DGGRI+N+SSGLARFA PGS  YAAMKGA+EVL+RYQAKE GARKIT N++APGAIETDF GG VRDN ++N+MVAS T LGRVGLPDDIG AI+ LL DE  WM AQRIEVSGGMF+
Sbjct:   88 FDYLLNNAGTGLYAPFAETTEAQFDDAMNVHFKGPFFLTQRLLPLLKDGGRILNVSSGLARFAQPGSSTYAAMKGAMEVLTRYQAKELGARKITANIIAPGAIETDFGGGRVRDNAQINQMVASNTALGRVGLPDDIGDAIAALLSDELGWMNAQRIEVSGGMFL 252
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: UPI0019B79D0F (SDR family oxidoreductase n=1 Tax=Bdellovibrio sp. TaxID=28201 RepID=UPI0019B79D0F)

HSP 1 Score: 246 bits (629), Expect = 3.770e-80
Identity = 118/165 (71.52%), Postives = 141/165 (85.45%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FD+L+NNAGTG+HA   ETTE QFD + +IHFK VFFLT +L+P + DGGRI+N+SSGLARFA+PG  AYAAMKG +E L++Y AKE GAR I VNV+APGAIETDF GGAVRDNP++N+ VAS T LGRVGLPDDIGGAI++LL ++NRW+ AQRIEVSGGMFI
Sbjct:   88 FDFLVNNAGTGVHASFAETTEVQFDEMVNIHFKGVFFLTQKLLPLLNDGGRIVNVSSGLARFALPGYAAYAAMKGGIETLTKYMAKELGARGIAVNVIAPGAIETDFGGGAVRDNPQLNQYVASQTALGRVGLPDDIGGAIASLLSEDNRWVNAQRIEVSGGMFI 252
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: UPI0012AA7D77 (SDR family oxidoreductase n=2 Tax=Leclercia TaxID=83654 RepID=UPI0012AA7D77)

HSP 1 Score: 246 bits (627), Expect = 7.580e-80
Identity = 120/165 (72.73%), Postives = 139/165 (84.24%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FDYL+NNAG GL+AP VETTE QFD + +IHFK  FFLT +L+P M DGGRI+N+SSGLARFA+PGS  YAAMKGA+EVL+RYQAKE GAR+IT N++APGAIETDF GG VRDN E+N+ +AS T LGRVGLPDDIG AI+ LL DE  WM AQRIEVSGGMF+
Sbjct:   88 FDYLLNNAGVGLYAPYVETTEAQFDEVMNIHFKGPFFLTQRLLPLMNDGGRILNVSSGLARFALPGSSTYAAMKGAMEVLTRYQAKELGARRITANIIAPGAIETDFGGGHVRDNKEINQQIASQTALGRVGLPDDIGDAIAALLSDELGWMNAQRIEVSGGMFL 252
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: A0A7Y7THM1_DESBX (SDR family oxidoreductase n=2 Tax=Desulfuromonadales bacterium TaxID=2099678 RepID=A0A7Y7THM1_DESBX)

HSP 1 Score: 245 bits (625), Expect = 1.430e-79
Identity = 115/165 (69.70%), Postives = 139/165 (84.24%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FDYL+NNAG G++AP +ETTEEQFD L +IHFK  FFLT +L+P M DGGRI+NISSGLARF+ PG  AYAAMKG +EVL+RY AKE G R I VNV+APGAIETDF GG VRDNPE+N+M+A+ T LGRVGLPDDIGGA++ LL ++NRW+  QR+EVSGG+F+
Sbjct:   86 FDYLVNNAGIGINAPFMETTEEQFDRLMNIHFKGTFFLTQKLLPIMKDGGRIVNISSGLARFSFPGYAAYAAMKGGIEVLTRYLAKELGPRNIAVNVIAPGAIETDFGGGMVRDNPEINQMIAAQTALGRVGLPDDIGGAVAALLSEDNRWINGQRVEVSGGIFL 250
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: Q2SKG5_HAHCH (Short-chain alcohol dehydrogenase-like protein n=3 Tax=Hahella TaxID=158481 RepID=Q2SKG5_HAHCH)

HSP 1 Score: 244 bits (624), Expect = 2.160e-79
Identity = 118/165 (71.52%), Postives = 137/165 (83.03%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FDYL+NNAG G+HAP  ETTEEQFD L +IH K V+FLT +L+P + DGGRI+NIS+GLARF++PG  AYAAMKG VEVL+RY AKE GAR I VNVVAPGAIETDF  G VRDN E+NK +AS T LGRVGLPDDIGG I+TLL ++NRW+ AQRIE SGGMF+
Sbjct:   88 FDYLVNNAGIGIHAPFAETTEEQFDQLVNIHLKGVYFLTQKLLPLIADGGRIVNISTGLARFSLPGYSAYAAMKGGVEVLTRYMAKELGARGIAVNVVAPGAIETDFGQGLVRDNSEINKFIASQTALGRVGLPDDIGGVIATLLSEDNRWINAQRIEASGGMFL 252
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BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: UPI001E4299A6 (SDR family oxidoreductase n=1 Tax=Microbulbifer celer TaxID=435905 RepID=UPI001E4299A6)

HSP 1 Score: 244 bits (623), Expect = 3.170e-79
Identity = 119/165 (72.12%), Postives = 141/165 (85.45%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FD+L+NNAG G++AP+V+T+EEQFD L +IHFK VFFLT +L+P + DGGRI+N+SSGLARF++PG GAYAAMKGAVEVLSRY AKE G R I VN VAPGAIETDF  GAVRDN  +N  +A+ T LGRVGLPDDIGGAI++LL D+NRW+ AQRIEVSGGMFI
Sbjct:   89 FDFLVNNAGIGINAPIVDTSEEQFDQLMNIHFKGVFFLTQKLLPLIADGGRIVNLSSGLARFSLPGYGAYAAMKGAVEVLSRYLAKELGPRGIAVNTVAPGAIETDFNSGAVRDNKALNDGIAAQTALGRVGLPDDIGGAIASLLSDDNRWINAQRIEVSGGMFI 253
[Close]
BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: A0A1M4X453_9GAMM (NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family n=1 Tax=Microbulbifer donghaiensis TaxID=494016 RepID=A0A1M4X453_9GAMM)

HSP 1 Score: 243 bits (621), Expect = 6.180e-79
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            FDYL+NNAG G HAP  ETTE QFD L +IHFK VFFLT +L+P + DGGRI+N+SSGLARF++PG  AYAAMKGAVEVLSRY AKE G R I VNVVAPGAIETDF GG VRDN EVN  +AS T LGRVGLP+DIGG I+ LL +ENRW+ AQRIE SGGMF+
Sbjct:   88 FDYLVNNAGIGHHAPFAETTEAQFDELMNIHFKGVFFLTQKLLPLLADGGRIVNLSSGLARFSLPGYSAYAAMKGAVEVLSRYLAKELGPRGIAVNVVAPGAIETDFGGGLVRDNAEVNDFIASQTALGRVGLPEDIGGVIAALLSEENRWINAQRIEASGGMFL 252
[Close]
BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Match: A0A7W8JNW0_9GAMM (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=2 Tax=unclassified Rhodanobacter TaxID=2621553 RepID=A0A7W8JNW0_9GAMM)

HSP 1 Score: 243 bits (621), Expect = 6.390e-79
Identity = 118/165 (71.52%), Postives = 138/165 (83.64%), Query Frame = 1 
Query:    1 FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGGRIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAPGAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENRWMTAQRIEVSGGMFI 495
            F++L+NNAGTGL A +VETTE  FD L ++HFK VFFLT +L+P M DGGRI+NISSGLARFA+PGS AYAA+KGAVEVL+RYQA+E G+R I VN VAPGAIETDFRGGAVRDNPE+ KM+AS T LGR GLPDDIGG I++LL+  N W+ AQRIE SGG  I
Sbjct:   89 FNFLVNNAGTGLQASIVETTEADFDELVNVHFKGVFFLTQKLLPLMADGGRIVNISSGLARFALPGSSAYAAVKGAVEVLTRYQARELGSRGIAVNTVAPGAIETDFRGGAVRDNPEMKKMIASMTALGRTGLPDDIGGVIASLLLPANGWINAQRIEASGGTLI 253
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54502.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X0AL67_9GAMM2.740e-8072.73NAD(P)-dependent dehydrogenase (Short-subunit alco... [more]
A0A6P0QKI7_9CYAN2.930e-8070.91SDR family oxidoreductase n=1 Tax=Microcoleus sp. ... [more]
A0A2S5C986_9ENTR3.770e-8072.73KR domain-containing protein n=6 Tax=Lelliottia Ta... [more]
UPI0019B79D0F3.770e-8071.52SDR family oxidoreductase n=1 Tax=Bdellovibrio sp.... [more]
UPI0012AA7D777.580e-8072.73SDR family oxidoreductase n=2 Tax=Leclercia TaxID=... [more]
A0A7Y7THM1_DESBX1.430e-7969.70SDR family oxidoreductase n=2 Tax=Desulfuromonadal... [more]
Q2SKG5_HAHCH2.160e-7971.52Short-chain alcohol dehydrogenase-like protein n=3... [more]
UPI001E4299A63.170e-7972.12SDR family oxidoreductase n=1 Tax=Microbulbifer ce... [more]
A0A1M4X453_9GAMM6.180e-7972.73NAD(P)-dependent dehydrogenase, short-chain alcoho... [more]
A0A7W8JNW0_9GAMM6.390e-7971.52NAD(P)-dependent dehydrogenase (Short-subunit alco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54502contigP-wetherbeei_contig54502:3..500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog349521.HCH_02025
PFAMsadh_short_C2
Model size498
Max annot lvl135619|Oceanospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.55e-80
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MU73@1224|Proteobacteria,1RNBQ@1236|Gammaproteobacteria,1XJCF@135619|Oceanospirillales
DescriptionKR domain
Cds size498
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186814.521555-CDS-P-wetherbeei_contig54502:2..5001683186814.521555-CDS-P-wetherbeei_contig54502:2..500Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54502 3..500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54502.1.1prot_P-wetherbeei_contig54502.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54502 3..500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54502.1.1

>prot_P-wetherbeei_contig54502.1.1 ID=prot_P-wetherbeei_contig54502.1.1|Name=mRNA_P-wetherbeei_contig54502.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
FDYLINNAGTGLHAPLVETTEEQFDSLCDIHFKAVFFLTNQLVPFMVDGG
RIINISSGLARFAMPGSGAYAAMKGAVEVLSRYQAKEFGARKITVNVVAP
GAIETDFRGGAVRDNPEVNKMVASFTTLGRVGLPDDIGGAISTLLMDENR
WMTAQRIEVSGGMFI*
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mRNA from alignment at P-wetherbeei_contig54502:3..500+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54502.1.1 ID=mRNA_P-wetherbeei_contig54502.1.1|Name=mRNA_P-wetherbeei_contig54502.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig54502:3..500+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGACTACCTCATCAACAATGCCGGAACCGGGCTCCACGCCCCCCTCGT
TGAGACCACGGAAGAGCAGTTCGATTCACTCTGCGACATCCACTTCAAAG
CCGTCTTCTTCCTCACCAATCAACTCGTGCCGTTTATGGTCGACGGGGGA
CGCATCATCAACATCTCCAGCGGCCTCGCTCGCTTCGCGATGCCCGGCTC
AGGAGCCTATGCAGCGATGAAAGGAGCCGTCGAGGTCCTCAGTCGCTACC
AGGCCAAGGAGTTTGGGGCTCGCAAGATCACCGTCAACGTGGTTGCTCCT
GGAGCCATCGAGACCGACTTCCGTGGAGGCGCCGTTCGCGACAATCCCGA
GGTTAACAAGATGGTGGCCAGCTTCACGACTCTCGGACGGGTCGGCCTCC
CCGACGATATCGGTGGCGCTATCTCCACGTTGCTGATGGACGAGAACCGC
TGGATGACAGCGCAGCGCATCGAGGTGTCGGGCGGCATGTTCATCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54502:3..500+

>mRNA_P-wetherbeei_contig54502.1.1 ID=mRNA_P-wetherbeei_contig54502.1.1|Name=mRNA_P-wetherbeei_contig54502.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig54502:3..500+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGACTACCTCATCAACAATGCCGGAACCGGGCTCCACGCCCCCCTCGT
TGAGACCACGGAAGAGCAGTTCGATTCACTCTGCGACATCCACTTCAAAG
CCGTCTTCTTCCTCACCAATCAACTCGTGCCGTTTATGGTCGACGGGGGA
CGCATCATCAACATCTCCAGCGGCCTCGCTCGCTTCGCGATGCCCGGCTC
AGGAGCCTATGCAGCGATGAAAGGAGCCGTCGAGGTCCTCAGTCGCTACC
AGGCCAAGGAGTTTGGGGCTCGCAAGATCACCGTCAACGTGGTTGCTCCT
GGAGCCATCGAGACCGACTTCCGTGGAGGCGCCGTTCGCGACAATCCCGA
GGTTAACAAGATGGTGGCCAGCTTCACGACTCTCGGACGGGTCGGCCTCC
CCGACGATATCGGTGGCGCTATCTCCACGTTGCTGATGGACGAGAACCGC
TGGATGACAGCGCAGCGCATCGAGGTGTCGGGCGGCATGTTCATCTGA
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