mRNA_P-wetherbeei_contig54468.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A0S2TG92_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TG92_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 1.680e-8 Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 SNALLAVAVLSNLALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMVLTPSLPGDVGV---ALLRGISVLNLLVIAHVLRHALGTWFLVGLLIA 372
S+AL+ + +L+ A S+ + +L AL+ + + A++ A+T LLL++ G R QT TALMG+GA+L +A + + + + L+ + V NL V+ H+LRHA+G F VGLL+A
Sbjct: 24 SSALMLLGMLAYAATSVFVGLLNLSPVVALVSGVFDMALVAAMTQLLLWIRELGARFQQTFTALMGTGAILGLLALPLLYIQLQVGEQAALLPSVLILALVVWNLAVVGHILRHAMGAPFFVGLLLA 150
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A3B1A9P2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1A9P2_9ZZZZ) HSP 1 Score: 58.2 bits (139), Expect = 6.440e-8 Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 40 ALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMVLTPSLPGDVGVAL---LRGISVLNLLVIAHVLRHALGT--WFLVGLLIAFGY 381
A+ L + +LE PLG A+L A+++T +L AL + L++ R QT TAL G+G + V + + LP +L L G+ + N++VI H+LRHALG W +GL + + Y
Sbjct: 37 AIGLAVSLLELPLGLAILSAMVDTLMLAALAWFSLWITGKTPRFTQTYTALAGTGVLFGLVGWPLLTFLQGLPEGQSSSLPLLLLGLVIWNIMVIGHILRHALGIMMWAALGLALFYMY 155
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A7C5JDL3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5JDL3_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 1.300e-6 Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 43 LSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMVLTPSLPGDVGVAL---LRGISVLNLLVIAHVLRHALGT--WFLVGLLIAFGY 381
+ L + +LE P G A+L A ++T +L AL +L L+++ R QT TAL G G + + + + LP G +L L G+ + N++VI H+LRHALG W GL + + Y
Sbjct: 38 IGLAVSLLEQPPGLAILSAAVDTLMLAALAWLSLWIIGKTARFTQTYTALAGIGILFGLMGWPLVAFLQGLPQGQGSSLSLLLLGLVIWNIVVIGHILRHALGLMMWAASGLALFYVY 155
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A3M0Z2W8_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0Z2W8_9GAMM) HSP 1 Score: 54.3 bits (129), Expect = 1.950e-6 Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 1 SNALLAVAVLSNLALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMVLTPSLPGDVGVA-----LLRGISVLNLLVIAHVLRHALGTWFL--VGLLIAFGY 381
S L A+A + L + ++ ++ P G A L ++L+T +L L ++L++ GRR +QT TAL GSGAVL G+ + ++L G A LL +V L+V+AH+LRHALG F+ VGL + + Y
Sbjct: 28 SPLLAALATAAYLLVGWLLGLVRLPAGQAFLASLLDTLLLAVLARIVLWVRDLGRRFLQTYTALAGSGAVL-GLVILPVLLWEGRGGTGEAAALLPLLLLAWTVWGLVVMAHILRHALGIRFVTAVGLSLVYLY 160
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A836TWD3_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836TWD3_9GAMM) HSP 1 Score: 52.0 bits (123), Expect = 1.540e-5 Identity = 43/136 (31.62%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 1 SNALLAVAVLSNLALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMVLT--------PSLPGD-VGVALLRGISVLNLLVIAHVLRHALGTWFLVGLLIAFGY 381
S LL + V+ +LS+++ L PL A+L +LE A++ + +L + R QT+TAL+G+G ++S +AF +L S G +G+ LL ++ N+ ++AH+LRHAL F++ +++A Y
Sbjct: 28 SKDLLTLCVVVYGSLSILLESLSLPLEKAILAGVLEVALIMIFSLAVLQIRGKSSRWTQTVTALVGTGIIISIIAFPVYILIGVGELGEFESNSGQSIGLLLLVALACWNIAIMAHILRHALEVNFMLAVILAITY 163
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A1G0G206_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G206_9GAMM) HSP 1 Score: 51.6 bits (122), Expect = 2.040e-5 Identity = 43/132 (32.58%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 1 SNALLAVAVLSNLALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMVLTPSLPGD-----VGVALLRGISVLNLLVIAHVLRHALGTWFLVGLLIAFGY 381
SN LL+++V + S ++ +L + + A L ++E ++ TY LL + R QT+TAL G+G V+S +A L SL + +G+ LL + + N+ ++AH+ RHAL T +G++IA Y
Sbjct: 28 SNVLLSLSVAGYILASAMLALLSAQIVNATLAGVIEALLVMVFTYGLLQFGNKTERWSQTVTALAGTGIVISLIALPLYYLGSSLGQEGTGQSIGLLLLIVLIIWNIAIMAHIFRHALQTTIGLGIIIAISY 159
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A7C5XST6_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XST6_9GAMM) HSP 1 Score: 50.4 bits (119), Expect = 5.070e-5 Identity = 45/108 (41.67%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 85 ALLKAILETAVLFALTYLLLFLMSYGRRLVQTMTALMGSGAVLSGVAFVTMV-------LTPSLPGDVGVALLRGISVLNLLVIAHVLRHALGTWFLVGLLIAFGYAL 387
AL + IL+ A+L A + LL L + R +QT TAL G+GA+L +A+ M L +P +GVALL G+ LLVIAH+LRHAL L +A Y L
Sbjct: 52 ALAEGILDAAMLAAFAWGLLRLRGWPNRFLQTYTALTGTGALLGLLAWAPMAAAWRAEQLGGEVPAVLGVALL-GLVAWTLLVIAHILRHALELPLLATTAMALAYVL 158
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Match: A0A2N6GNA5_9GAMM (Uncharacterized protein n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A2N6GNA5_9GAMM) HSP 1 Score: 50.4 bits (119), Expect = 5.530e-5 Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 1
Query: 10 LLAVAVLSNLALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFL---MSYGR---RLVQTMTALMGSGAVLSGVAFVTMVLTPSLP-----GDVGVALLRGISVLNLLVIAHVLRHALGTWFLVGLLIAFGYAL 387
L+ AVL + ++V+Y G AL+ +L+ A ++LLFL +SY R RL+Q+ TA+ GSG V++ V+ +L + P G++GV L + V ++VIAH+LRHA F+ G L+A GY L
Sbjct: 34 LVLTAVLGVITGTVVLYDSFGDAGQALMAQLLDLA------FMLLFLRLGLSYRRKEARLLQSATAVFGSGVVMNLVSMPVQLLIGNDPAGSVLGELGVLLYLFLLVWVIVVIAHILRHAFEIKFVAGSLLAIGYFL 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54468.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54468.1.1 >prot_P-wetherbeei_contig54468.1.1 ID=prot_P-wetherbeei_contig54468.1.1|Name=mRNA_P-wetherbeei_contig54468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp SNALLAVAVLSNLALSLVIYVLESPLGYALLKAILETAVLFALTYLLLFLback to top mRNA from alignment at P-wetherbeei_contig54468:3..392+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54468.1.1 ID=mRNA_P-wetherbeei_contig54468.1.1|Name=mRNA_P-wetherbeei_contig54468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig54468:3..392+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54468:3..392+ >mRNA_P-wetherbeei_contig54468.1.1 ID=mRNA_P-wetherbeei_contig54468.1.1|Name=mRNA_P-wetherbeei_contig54468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig54468:3..392+ (Phaeothamnion wetherbeei SAG_119_79)back to top |