mRNA_P-wetherbeei_contig54426.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54426.1.1
Unique NamemRNA_P-wetherbeei_contig54426.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: UPI0019963597 (Type III pantothenate kinase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019963597)

HSP 1 Score: 236 bits (603), Expect = 3.450e-76
Identity = 118/175 (67.43%), Postives = 146/175 (83.43%), Query Frame = 1
Query:    1 GWVLRAEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERMSAAMRAAGH 525
            G V  A+ D+L AQWSSLP P++IVIANVAGDE G+RL+ +  RWQI+PRWA+S +AQ GV N YD+  QLGVDRWAALIGAR +S + C+V+NAGTA T+DAL+A+GEF+GGIIV GF+L+HE+LA+NTA LS+ERG F+ FPR+TR+AITSGAIQAL GA+ERM  AM  AGH
Sbjct:   26 GRVAHADFDALNAQWSSLPAPSSIVIANVAGDETGQRLRKFLQRWQIAPRWATSAQAQAGVINCYDEALQLGVDRWAALIGARAHSSEPCVVVNAGTAMTVDALTARGEFLGGIIVPGFNLLHESLASNTARLSAERGNFTPFPRTTRDAITSGAIQALCGAIERMRDAMLVAGH 200          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A1F3YUV2_9PROT (Type III pantothenate kinase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YUV2_9PROT)

HSP 1 Score: 177 bits (450), Expect = 4.610e-53
Identity = 94/167 (56.29%), Postives = 113/167 (67.66%), Query Frame = 1
Query:   16 AEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERMSAAMRA 516
            A+I  L A WSSLP P+ IVIANVAG+   + L     RW   P W S+  AQCGVTN Y DP QLGVDRWAAL+GA      ACLV+NAGTATT+D LS++G F GGII+ G DLM  ALA +TAGL   +G F+  PR T +AI SG + A +GA+ERM A + A
Sbjct:   33 ADIARLGADWSSLPAPSQIVIANVAGEPARKALSGQLARWAAEPLWVSAQAAQCGVTNAYADPEQLGVDRWAALVGAWHLQRGACLVVNAGTATTVDLLSSQGVFRGGIIIPGVDLMKRALARHTAGLPLAQGRFAEQPRCTADAIESGCLHAQAGAIERMHAGLEA 199          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: UPI0019851389 (Type III pantothenate kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019851389)

HSP 1 Score: 174 bits (440), Expect = 1.730e-51
Identity = 88/160 (55.00%), Postives = 113/160 (70.62%), Query Frame = 1
Query:   19 EIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERM 498
            +I  L   W++LP P  I+I NVAG+ +   L     RW ++P W +S  + CGV N Y++P QLG DRWAALIGAR    DACLV+NAGTA TID LSA G F+GGIIV G+  M +ALATNTA L+ + GEF+ FP +T +AI SGA+QA++GAV+RM
Sbjct:   30 DIAELTVAWAALPEPERIIIVNVAGECIQAGLLDAVARWHVAPTWVNSSISACGVRNSYENPGQLGADRWAALIGARHRHRDACLVVNAGTALTIDMLSADGVFLGGIIVPGYTSMRQALATNTAALALQPGEFTRFPLNTGDAIASGAVQAMAGAVQRM 189          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A1F4DJ27_9PROT (Type III pantothenate kinase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DJ27_9PROT)

HSP 1 Score: 171 bits (434), Expect = 1.870e-50
Identity = 94/174 (54.02%), Postives = 115/174 (66.09%), Query Frame = 1
Query:    1 GWVLRAEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERMSAAMRAAG 522
            G V   ++  L+A WS LP P  IVI+NVAG+   R L     R+ + P W S+ RAQCGVTN Y DP QLG DRWAAL+GA       CLV+ AGTATT+D LSA+G   GGIIVAG DLM  ALA NTAGL+ E+G F+  PR T +AI SG + A +GA+ERM + + A G
Sbjct:   43 GAVAVEDMARLKADWSLLPAPARIVISNVAGEPARRSLLTLLARFAVEPLWISAQRAQCGVTNGYTDPGQLGPDRWAALVGAWHLQRGPCLVVTAGTATTVDILSAQGVHEGGIIVAGVDLMKRALARNTAGLALEQGRFAQQPRCTADAIESGCLHAQAGAIERMYSKLEAGG 216          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A7V8ZR23_9BURK (Type III pantothenate kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZR23_9BURK)

HSP 1 Score: 169 bits (429), Expect = 7.950e-50
Identity = 87/160 (54.37%), Postives = 111/160 (69.38%), Query Frame = 1
Query:   19 EIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERM 498
            ++  L   W++LP P  I+I NVAG+ V   L     RW++ P W +S     GV N Y++P QLG DRWAALIGAR    DACLV+NAGTA TIDALS  G FIGGIIV G+ LM +ALA NTA L+ + GEF+ FP +T +AI SGA+QA++GAV++M
Sbjct:   30 DVAELATAWAALPAPERIMIVNVAGERVRAGLLGAVARWRVPPTWVNSSILAFGVRNSYENPGQLGADRWAALIGARHRLRDACLVVNAGTALTIDALSDDGVFIGGIIVPGYTLMRQALAVNTAALALQSGEFAHFPLNTGDAIASGAVQAMAGAVQQM 189          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A2T5K3Z9_9PROT (Type III pantothenate kinase n=1 Tax=Nitrosospira sp. Nsp2 TaxID=136548 RepID=A0A2T5K3Z9_9PROT)

HSP 1 Score: 165 bits (418), Expect = 4.450e-48
Identity = 85/168 (50.60%), Postives = 112/168 (66.67%), Query Frame = 1
Query:    1 GWVLRAEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERMSA 504
            G V + EI  LE +W  L  P+ I++++VAG E    L     RW + PRWAS++  QCGV N Y +P+QLG DRWAAL+ A +     CLV++AGTA T+DALS  GEF+GGII  GFDLM + L  NTA  + + G+F  +P ST +AI SGA  A++GAVERM+A
Sbjct:   29 GAVAQEEITLLEQEWQKLREPSCIMVSDVAGAEAKAELSTLFSRWNVEPRWASAVAYQCGVRNYYANPAQLGSDRWAALVAAWQTERQGCLVVDAGTAMTVDALSDTGEFLGGIITPGFDLMRKTLIGNTAVPNKDDGDFCDYPDSTADAIYSGATHAMAGAVERMAA 196          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A1H7Q7Y0_9PROT (Type III pantothenate kinase n=1 Tax=Nitrosovibrio tenuis TaxID=1233 RepID=A0A1H7Q7Y0_9PROT)

HSP 1 Score: 163 bits (413), Expect = 3.630e-47
Identity = 82/156 (52.56%), Postives = 106/156 (67.95%), Query Frame = 1
Query:   31 LEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERM 498
            LE +W  L  P  ++I+NVA  +    L     RW+I P+WA++   QCGV N Y DP+QLG DRWAAL+ A +     CL+++AGTA TIDALS  GEF+GGII+ G DLM +AL  NTA L SE G+F  +P ST +AI SGA+ A++GAVERM
Sbjct:   40 LEREWGDLREPARVIISNVANAQAKSDLSELLSRWEIEPQWANATAYQCGVRNYYQDPAQLGSDRWAALLAAWQLQRQGCLIVDAGTAVTIDALSDTGEFLGGIIIPGIDLMQKALTGNTASLKSETGKFRDYPDSTADAIYSGALHAITGAVERM 195          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A524MDC3_9PROT (Type III pantothenate kinase n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A524MDC3_9PROT)

HSP 1 Score: 160 bits (405), Expect = 3.940e-46
Identity = 84/157 (53.50%), Postives = 101/157 (64.33%), Query Frame = 1
Query:   31 LEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERMS 501
            L  +W  LP P  I+++NVA       L      W+  P+W +SL  QCGV N Y DPS LG DRWAALI A +     CLV++ GTA T+DALS  GEF+GGIIV GFDLM + L TN  GL ++ GEF  FP +T +AI SG IQAL GAVERMS
Sbjct:   38 LRQEWQDLPKPLCIIVSNVANTIAKTMLSELLSCWEAKPKWITSLAYQCGVRNNYTDPSLLGSDRWAALIAAWELQQQGCLVVDVGTAMTVDALSDTGEFLGGIIVPGFDLMKKTLTTNITGLQNQEGEFHDFPDNTADAIHSGTIQALVGAVERMS 194          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A1F4BBL7_9PROT (Type III pantothenate kinase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BBL7_9PROT)

HSP 1 Score: 160 bits (404), Expect = 4.840e-46
Identity = 85/174 (48.85%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    1 GWVLRAEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVERMSAAMRAAG 522
            GW+       L   W+ L  P  ++ ANVAG  V R L A + R++   R+  S   QCGV + Y++P+QLG DRWAALIGAR +    C+V+NAGT  T+DAL+A+G F+GG+IVAG DLM  +LA  TAGL    G F+ FP  T +AI SG + AL+GAVERM   MR  G
Sbjct:   27 GWISTPRAGRLAGAWAKLEAPDRLIAANVAGARVARSLGAAARRFRRRIRFVRSAAGQCGVKSAYENPAQLGADRWAALIGARHHHRGPCVVVNAGTTVTVDALTAEGVFLGGMIVAGADLMRASLARGTAGLRPRSGRFAFFPGRTADAIESGTVNALAGAVERMQRFMRQTG 200          
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Match: A0A2N2VQ99_9PROT (Type III pantothenate kinase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-10 TaxID=2013701 RepID=A0A2N2VQ99_9PROT)

HSP 1 Score: 159 bits (402), Expect = 8.420e-46
Identity = 84/165 (50.91%), Postives = 109/165 (66.06%), Query Frame = 1
Query:    1 GWVLRAEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPRWASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATTIDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNAITSGAIQALSGAVER 495
            G V  AE+  L A     P P  +++ANVAG E G+R++     WQ       +   +CGVTNLY +P+QLGVDRW AL+GAR  +  ACLV+ AGTATTID L A+G F+GG+I+ G  LMH ALA +TAGL    G F++ PR T +AI SGAI+A +GA+ER
Sbjct:   26 GAVAHAEVAQLAALVDHWPTPGKVLLANVAGAEAGQRIRQQLAAWQSVFDEVKAEAQRCGVTNLYKNPAQLGVDRWCALVGARAQTSSACLVVMAGTATTIDTLDAQGHFLGGLILPGLGLMHRALARDTAGLPFANGHFTSQPRCTDDAIVSGAIEAQAGAIER 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54426.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00199635973.450e-7667.43Type III pantothenate kinase n=1 Tax=Prolixibacter... [more]
A0A1F3YUV2_9PROT4.610e-5356.29Type III pantothenate kinase n=3 Tax=unclassified ... [more]
UPI00198513891.730e-5155.00Type III pantothenate kinase n=1 Tax=Burkholderial... [more]
A0A1F4DJ27_9PROT1.870e-5054.02Type III pantothenate kinase n=2 Tax=unclassified ... [more]
A0A7V8ZR23_9BURK7.950e-5054.38Type III pantothenate kinase n=1 Tax=Burkholderial... [more]
A0A2T5K3Z9_9PROT4.450e-4850.60Type III pantothenate kinase n=1 Tax=Nitrosospira ... [more]
A0A1H7Q7Y0_9PROT3.630e-4752.56Type III pantothenate kinase n=1 Tax=Nitrosovibrio... [more]
A0A524MDC3_9PROT3.940e-4653.50Type III pantothenate kinase n=1 Tax=Nitrosomonada... [more]
A0A1F4BBL7_9PROT4.840e-4648.85Type III pantothenate kinase n=1 Tax=Betaproteobac... [more]
A0A2N2VQ99_9PROT8.420e-4650.91Type III pantothenate kinase n=1 Tax=Betaproteobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54426contigP-wetherbeei_contig54426:6..530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1288494.EBAPG3_23440
Preferred namecoaX
PFAMsBPL_C,BPL_LplA_LipB,Pan_kinase
Model size525
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00002,RC00017,RC00043,RC00070,RC00096,RC02896
KEGG koko:K01947,ko:K03525
KEGG ReactionR01074,R02971,R03018,R04391,R05145
KEGG Pathwayko00770,ko00780,ko01100,map00770,map00780,map01100
KEGG ModuleM00120
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.43e-44
EggNOG OGsCOG1521@1|root,COG1521@2|Bacteria,1MUYA@1224|Proteobacteria,2VK1G@28216|Betaproteobacteria,3733Y@32003|Nitrosomonadales
EC2.7.1.33,6.3.4.15
DescriptionCatalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Cds size525
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186813.307903-CDS-P-wetherbeei_contig54426:5..5301683186813.307903-CDS-P-wetherbeei_contig54426:5..530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54426 6..530 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54426.1.1prot_P-wetherbeei_contig54426.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54426 6..530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54426.1.1

>prot_P-wetherbeei_contig54426.1.1 ID=prot_P-wetherbeei_contig54426.1.1|Name=mRNA_P-wetherbeei_contig54426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
GWVLRAEIDSLEAQWSSLPVPTAIVIANVAGDEVGRRLQAYSCRWQISPR
WASSLRAQCGVTNLYDDPSQLGVDRWAALIGARKNSPDACLVINAGTATT
IDALSAKGEFIGGIIVAGFDLMHEALATNTAGLSSERGEFSAFPRSTRNA
ITSGAIQALSGAVERMSAAMRAAGH
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mRNA from alignment at P-wetherbeei_contig54426:6..530-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54426.1.1 ID=mRNA_P-wetherbeei_contig54426.1.1|Name=mRNA_P-wetherbeei_contig54426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig54426:6..530- (Phaeothamnion wetherbeei SAG_119_79)
GGCTGGGTGCTGCGCGCGGAAATCGATTCGCTGGAGGCGCAGTGGTCGTC GCTGCCGGTGCCCACCGCGATCGTGATCGCCAATGTCGCGGGAGATGAAG TGGGGCGCCGGCTGCAGGCTTATTCTTGCAGGTGGCAAATTTCTCCACGT TGGGCCAGTAGCCTGCGCGCGCAGTGTGGCGTGACCAATCTGTACGACGA TCCGTCGCAGCTTGGTGTCGACCGCTGGGCAGCGCTGATCGGCGCGCGCA AAAATTCGCCGGACGCCTGTCTCGTCATCAACGCCGGCACCGCAACCACG ATCGATGCGCTGAGCGCCAAGGGAGAGTTCATTGGCGGCATCATCGTCGC CGGCTTCGACCTGATGCACGAAGCGCTTGCAACCAATACCGCGGGCTTGT CTTCCGAACGCGGGGAGTTTTCCGCTTTTCCGCGCAGCACGCGCAATGCC ATCACCAGCGGCGCCATCCAGGCGCTGAGCGGCGCGGTCGAGCGCATGAG CGCGGCGATGCGGGCGGCCGGGCAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54426:6..530-

>mRNA_P-wetherbeei_contig54426.1.1 ID=mRNA_P-wetherbeei_contig54426.1.1|Name=mRNA_P-wetherbeei_contig54426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig54426:6..530- (Phaeothamnion wetherbeei SAG_119_79)
GGCTGGGTGCTGCGCGCGGAAATCGATTCGCTGGAGGCGCAGTGGTCGTC
GCTGCCGGTGCCCACCGCGATCGTGATCGCCAATGTCGCGGGAGATGAAG
TGGGGCGCCGGCTGCAGGCTTATTCTTGCAGGTGGCAAATTTCTCCACGT
TGGGCCAGTAGCCTGCGCGCGCAGTGTGGCGTGACCAATCTGTACGACGA
TCCGTCGCAGCTTGGTGTCGACCGCTGGGCAGCGCTGATCGGCGCGCGCA
AAAATTCGCCGGACGCCTGTCTCGTCATCAACGCCGGCACCGCAACCACG
ATCGATGCGCTGAGCGCCAAGGGAGAGTTCATTGGCGGCATCATCGTCGC
CGGCTTCGACCTGATGCACGAAGCGCTTGCAACCAATACCGCGGGCTTGT
CTTCCGAACGCGGGGAGTTTTCCGCTTTTCCGCGCAGCACGCGCAATGCC
ATCACCAGCGGCGCCATCCAGGCGCTGAGCGGCGCGGTCGAGCGCATGAG
CGCGGCGATGCGGGCGGCCGGGCAT
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