mRNA_P-wetherbeei_contig54404.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54404.1.1
Unique NamemRNA_P-wetherbeei_contig54404.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A6N8W4W7_9CHLR (S-adenosyl-L-methionine-dependent methyltransferase n=3 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6N8W4W7_9CHLR)

HSP 1 Score: 150 bits (380), Expect = 1.090e-41
Identity = 77/176 (43.75%), Postives = 107/176 (60.80%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            PH+F D +A  + +P W AV    LL W +   +LG  RPV+  +++R + T D L   +  G  QYV+LGAG D+ ALRR +    V++ EVDHPATQ VK  R+  +   +P  +   VPVDFE + L + L ++ FD+   +F++W GV YYLT  AI DTL  +AA SAPGS
Sbjct:   36 PHIFEDTFALHMLTPFWHAVAKFRLLKWLVGDVILGVYRPVYPAVVLRSRYTEDQLVDAIDSGTEQYVILGAGHDTFALRRKDLAGKVRVFEVDHPATQDVKKQRILKANGSIP-DNLTLVPVDFEVDRLDEELEKAGFDAQLPAFYSWLGVTYYLTPEAIRDTLDRVAAMSAPGS 210          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A845D2D6_9CHLR (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Caldilineaceae bacterium SB0662_bin_25 TaxID=2605257 RepID=A0A845D2D6_9CHLR)

HSP 1 Score: 147 bits (371), Expect = 2.420e-40
Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            PH+F D +A  + +P W AV     L W +   +LG  RPV+  +++R + T D L   +  G  QYV+LGAG D+ ALRR +    V++ EVDHPATQ VK  R+  +   +P  +   VPVDFE + L + + ++ F+S + +F++W GV YYLT  AI DTL  +A  SAPGS
Sbjct:   36 PHIFEDTFAMHMLTPFWHAVAKYRPLRWLVGDVILGVYRPVYPAVVLRSRYTEDQLVEAIESGTEQYVILGAGHDTFALRRKDLADKVRVFEVDHPATQEVKRQRILKANGSIP-DNLTFVPVDFEVDRLDEEMEKAGFNSQQPAFYSWLGVTYYLTPEAIRDTLDRVAQKSAPGS 210          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A6B1G304_9CHLR (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Caldilineaceae bacterium SB0675_bin_29 TaxID=2605266 RepID=A0A6B1G304_9CHLR)

HSP 1 Score: 145 bits (365), Expect = 1.900e-39
Identity = 77/176 (43.75%), Postives = 105/176 (59.66%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            PH+F D YA Q+ +P W AV     L W +   +LG  RPV+  +++R + T D L   V  G  QYV+LGAG D+ ALRR +    V++ EVD P TQ VK   +  +   +P A+   VPV+FE + L + L ++ FDS + +F++W GV YYLT  AI DTL  IA  SAPGS
Sbjct:   36 PHIFEDTYALQMLTPFWHAVAKFRPLKWLVGDVILGVYRPVYPAVVLRSRYTEDQLVEAVESGTEQYVILGAGHDTFALRRKDLADKVRVFEVDTPNTQDVKRQSILKANGSIP-ANLTLVPVNFEVDRLDEELEKAGFDSQQPAFYSWLGVTYYLTPEAIRDTLDRIAQLSAPGS 210          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A3A4T2Z0_9DELT (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4T2Z0_9DELT)

HSP 1 Score: 139 bits (351), Expect = 1.590e-37
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRG-VKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            P VF DPYA  L  P+W+ +    L YW   R +   L P+   I+ R +   D L+A  A G  QYV++GAGFDS ALRR +   G + + E+DHPA+Q  K AR+   G  LP    E V +DFE E + D LA SS+     +FF+W G ++YLT +A+ +TL  IAA +  GS
Sbjct:   26 PVVFDDPYAGSLAGPVWQKLSGLRLCYWIGTRMIYSGLDPIRRQIVARARYAEDRLEASAASGVSQYVIIGAGFDSFALRRKDLSDGRLSVFELDHPASQQAKKARLRKLGLALP-EKHEFVEIDFEKEGVGDALAHSSYSRKHPAFFSWLGTVHYLTPQAVINTLNAIAACACAGS 201          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A5C7J8H1_9RHOO (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A5C7J8H1_9RHOO)

HSP 1 Score: 139 bits (351), Expect = 3.040e-37
Identity = 78/176 (44.32%), Postives = 107/176 (60.80%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            P VF DPYA  +    WR V ++  L W ++R  L  +RPV+G ++ R + + D L A +ARG RQYV++GAG D+ ALR       ++I E+DH A+QA+K  R+ D     P A  E V  D E E++S  LARS FD  R +FF+W G  YYL+E A+  TLQ IA ++A GS
Sbjct:   53 PRVFDDPYAFDMLYGHWRWVVASRFLDWLVLRKALNVMRPVYGQVVARSRFSEDALHAAIARGVRQYVIVGAGLDTFALRAGPSAAALRIFELDHAASQALK-RRLIDRIGGAP-AIVEYVAADLESESVSAALARSGFDPGRPAFFSWLGTTYYLSEPAVLATLQSIAENAAAGS 226          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A3M1EHK5_9DELT (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1EHK5_9DELT)

HSP 1 Score: 139 bits (351), Expect = 8.050e-37
Identity = 78/176 (44.32%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            P +F DP+A ++TSP WR    +  LYW +     G L+ V   IL R +   + L   V+RG RQYV+L AGFD+  LRRP     + I EVDHPATQ VK+AR+   G  LP   F  VP+DFE + L + LA+  F S   +F +W G I YL+  A+ +T   IAA  APGS
Sbjct:   96 PVLFDDPFAIEMTSPPWRLACRSRFLYWLLAERCFGDLKGVRAHILARSRFAEERLFEAVSRGVRQYVVLAAGFDTFLLRRPAAWSELAIFEVDHPATQRVKIARLERLGT-LPPVTF--VPIDFERQTLGEALAQPPFSSELPTFCSWLGAIPYLSREAVFETFSGIAAVCAPGS 268          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A524NL91_9DELT (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NL91_9DELT)

HSP 1 Score: 136 bits (343), Expect = 2.530e-36
Identity = 72/174 (41.38%), Postives = 102/174 (58.62%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAP 522
            P +F DP+A + T+P WR +     L W +   LL ++RPV   ++ R +   D L A +A G  QYV++GAGFDS ALRR +    V++ E+DHP TQ  K  R++  G  LP  + E V VDFE E ++DGL +SS+  +  +FF+W G   YL+  A   TL  IA  +AP
Sbjct:   26 PAIFEDPFALEFTNPTWRRIVVTKPLRWLVFEVLLRSMRPVAAQVVARSRYAEDLLDAAIASGIGQYVIVGAGFDSFALRRRDLESTVRVFELDHPDTQRAKRERLSSIGVDLP-GNVEFVGVDFERETVADGLMQSSYQPNSPAFFSWLGTTPYLSNSATLGTLASIAQLAAP 198          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A3A4RNG6_9DELT (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4RNG6_9DELT)

HSP 1 Score: 135 bits (339), Expect = 2.380e-35
Identity = 72/176 (40.91%), Postives = 105/176 (59.66%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            P VF DP+A QL  P W+ +  + LLY    R +  +L P+   +L R +   D L+  +  G RQYV++GAG DS ALRR +    ++I E+DHPATQ  K AR+ +   +LP  + E VP+DFE ENL   LA SS+D    +FF+W G ++Y+++ A+  TL  I + + P S
Sbjct:   65 PVVFEDPFAGQLAGPGWQFLCKSRLLYLFATRTIYKSLDPIRRQVLARARYAEDKLREALESGVRQYVIIGAGLDSFALRRSDLDGKIRIYELDHPATQQAKKARVEELNLRLP-KNHEFVPIDFEKENLCHALAGSSYDPEVPAFFSWLGTVHYISQPAVFQTLTSIQSCACPES 239          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A6L7K8Q7_9BACT (S-adenosyl-L-methionine-dependent methyltransferase n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L7K8Q7_9BACT)

HSP 1 Score: 133 bits (334), Expect = 7.120e-35
Identity = 73/176 (41.48%), Postives = 100/176 (56.82%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            P V  DPYA  L    W+ V  +   +W + R LL  + P   ++L+R + T D + A  ARG  Q V+LGAGFD+ ALR P+   G+++ EVD PA+ A+K  R+A++G  +P      V VDFE + L D L  + FD    +FF+W GV YYL   A+  TL  I   SAPGS
Sbjct:   40 PLVTEDPYAIHLAGERWQRVIGSSWRHWLVTRVLLRKVIPTTTFVLIRTRFTDDRVLAAAARGVHQLVILGAGFDTFALRHPDL--GIRVFEVDLPASAALKRERLANAGIAVP-EHLHFVEVDFERDRLDDRLLAAGFDRQAPAFFSWMGVTYYLAPEAVTGTLARITGLSAPGS 212          
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Match: A0A382VFP4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VFP4_9ZZZZ)

HSP 1 Score: 129 bits (323), Expect = 7.610e-34
Identity = 73/176 (41.48%), Postives = 98/176 (55.68%), Query Frame = 1
Query:    1 PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQLTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQAVKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQGVIYYLTERAIADTLQHIAASSAPGS 528
            P +F DPYA  LTSPLWR +  N +L   I     G LR V   +L R +   D L   V  G  QYV++GAG DS ALRR +    + + E+DHP TQ  K  R+ + G +LP  + E +P+D E E++ D LA SSF  +  +FF+  G  YYLT  A+  TL+ I   +  GS
Sbjct:   26 PVIFEDPYALSLTSPLWRMIIRNRILSRLIFTKQSGFLRSVGAQVLARSRYAEDLLLNAVKNGATQYVMIGAGLDSFALRREDLSHCLTVYELDHPVTQGAKRERLRNLGYELP-ENVEFIPIDCERESVEDVLAASSFSPNDRTFFSCLGTTYYLTRDAVLKTLRSIGTYTVLGS 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54404.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N8W4W7_9CHLR1.090e-4143.75S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A845D2D6_9CHLR2.420e-4042.05S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6B1G304_9CHLR1.900e-3943.75S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A3A4T2Z0_9DELT1.590e-3742.37S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A5C7J8H1_9RHOO3.040e-3744.32S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A3M1EHK5_9DELT8.050e-3744.32S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A524NL91_9DELT2.530e-3641.38S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A3A4RNG6_9DELT2.380e-3540.91S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6L7K8Q7_9BACT7.120e-3541.48S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A382VFP4_9ZZZZ7.610e-3441.48Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54404contigP-wetherbeei_contig54404:2..529 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1120977.JHUX01000004_gene2515
PFAMsLCM
Model size528
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.25e-32
EggNOG OGsCOG3315@1|root,COG3315@2|Bacteria,1MYNK@1224|Proteobacteria,1SBXS@1236|Gammaproteobacteria,3NJIC@468|Moraxellaceae
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-28_001170.2
DescriptionExhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Cds size528
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186813.0670607-CDS-P-wetherbeei_contig54404:1..5291683186813.0670607-CDS-P-wetherbeei_contig54404:1..529Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54404 2..529 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54404.1.1prot_P-wetherbeei_contig54404.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54404 2..529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54404.1.1

>prot_P-wetherbeei_contig54404.1.1 ID=prot_P-wetherbeei_contig54404.1.1|Name=mRNA_P-wetherbeei_contig54404.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
PHVFADPYAAQLTSPLWRAVDSNPLLYWPIVRGLLGALRPVHGWILVRDQ
LTVDDLQAFVARGGRQYVLLGAGFDSIALRRPEWLRGVKIIEVDHPATQA
VKLARMADSGAQLPLADFEAVPVDFEHENLSDGLARSSFDSSRLSFFAWQ
GVIYYLTERAIADTLQHIAASSAPGS
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mRNA from alignment at P-wetherbeei_contig54404:2..529+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54404.1.1 ID=mRNA_P-wetherbeei_contig54404.1.1|Name=mRNA_P-wetherbeei_contig54404.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54404:2..529+ (Phaeothamnion wetherbeei SAG_119_79)
CCACACGTGTTTGCTGACCCTTATGCCGCGCAATTGACCAGCCCGCTGTG GCGCGCGGTGGACAGCAATCCATTGTTGTATTGGCCCATAGTACGGGGTC TGCTCGGCGCTCTGCGGCCTGTGCACGGCTGGATCCTGGTGCGCGACCAG TTGACGGTCGACGACTTGCAGGCTTTTGTCGCGCGCGGCGGCCGTCAGTA TGTATTGCTCGGCGCCGGTTTCGATTCCATCGCGCTGCGCCGACCGGAAT GGCTGCGCGGCGTCAAGATCATCGAGGTCGATCATCCCGCTACCCAGGCG GTCAAACTCGCGCGCATGGCGGACAGCGGTGCGCAACTTCCGTTAGCTGA CTTCGAGGCCGTGCCTGTCGATTTCGAGCACGAAAACCTGAGTGATGGTC TGGCGCGATCGAGCTTCGATAGCAGCCGATTAAGTTTCTTCGCCTGGCAG GGGGTCATCTACTACCTGACGGAGCGTGCGATTGCAGACACCCTGCAGCA CATCGCGGCTTCCAGCGCGCCAGGTAGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54404:2..529+

>mRNA_P-wetherbeei_contig54404.1.1 ID=mRNA_P-wetherbeei_contig54404.1.1|Name=mRNA_P-wetherbeei_contig54404.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig54404:2..529+ (Phaeothamnion wetherbeei SAG_119_79)
CCACACGTGTTTGCTGACCCTTATGCCGCGCAATTGACCAGCCCGCTGTG
GCGCGCGGTGGACAGCAATCCATTGTTGTATTGGCCCATAGTACGGGGTC
TGCTCGGCGCTCTGCGGCCTGTGCACGGCTGGATCCTGGTGCGCGACCAG
TTGACGGTCGACGACTTGCAGGCTTTTGTCGCGCGCGGCGGCCGTCAGTA
TGTATTGCTCGGCGCCGGTTTCGATTCCATCGCGCTGCGCCGACCGGAAT
GGCTGCGCGGCGTCAAGATCATCGAGGTCGATCATCCCGCTACCCAGGCG
GTCAAACTCGCGCGCATGGCGGACAGCGGTGCGCAACTTCCGTTAGCTGA
CTTCGAGGCCGTGCCTGTCGATTTCGAGCACGAAAACCTGAGTGATGGTC
TGGCGCGATCGAGCTTCGATAGCAGCCGATTAAGTTTCTTCGCCTGGCAG
GGGGTCATCTACTACCTGACGGAGCGTGCGATTGCAGACACCCTGCAGCA
CATCGCGGCTTCCAGCGCGCCAGGTAGT
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