mRNA_P-wetherbeei_contig54402.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: UPI0019975279 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019975279) HSP 1 Score: 241 bits (614), Expect = 1.630e-76 Identity = 120/175 (68.57%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 1 MLGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
LGQQF VDNR+GASGNIG E+ A++ PDG+TV+I NVST AINP AFA TL FD KEL+GV+L++ +PNLLVA + FPP KEL+ YA+ARPGQLNYSNPIGAYSHLDMLEF+++AGIQMVNVP+KGAG++ A V+ GEIH F NAATVTPQV GRMKA+ T+ RL D
Sbjct: 74 QLGQQFIVDNRAGASGNIGTEIVARAQPDGHTVLIGNVSTNAINPTAFAGTLSFDPVKELVGVTLISRIPNLLVAAATFPPKDFKELLAYARARPGQLNYSNPIGAYSHLDMLEFLTRAGIQMVNVPTKGAGATVAAVLNGEIHFYFTNAATVTPQVLGGRMKAYATSGAQRLAD 248
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: UPI0019C66C64 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019C66C64) HSP 1 Score: 233 bits (595), Expect = 3.120e-74 Identity = 115/175 (65.71%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 1 MLGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
+LGQ VDNR+GA+GNI +E+ A++ PDGYTV+++NVST +INPI +A TLKFD KEL GV+LLA++PNLLV+G+ FPP S KE+I YA+ARPGQ+NYS P+G YSHLDML+ ++ G+Q+VNVPSKGAGSS A +I GEIH S NAA+ T QVKAGRMKAF TTA RLPD
Sbjct: 29 VLGQSVIVDNRAGAAGNIAMEIVARAQPDGYTVLVSNVSTASINPILYAGTLKFDPVKELAGVTLLAAIPNLLVSGAGFPPTSFKEVIAYARARPGQMNYSTPLGGYSHLDMLDLAARTGMQLVNVPSKGAGSSAASIINGEIHFSIANAASTTAQVKAGRMKAFATTATKRLPD 203
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: UPI001C0C8473 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. UK-Mo-2m-Kol15 TaxID=2576916 RepID=UPI001C0C8473) HSP 1 Score: 214 bits (546), Expect = 2.150e-66 Identity = 103/174 (59.20%), Postives = 140/174 (80.46%), Query Frame = 1
Query: 1 MLGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLP 522
++G+ V+N++GASGNIG+ A+S PDGYT+++ NVST AIN +AK LK S++L+ ++++AS+PN++V+G NFPPN+LKEL+ YAK RPG+LN+S P+G YS+LDML+F +AGI MVN+PSKGAGSS +IAGEIH S LNAATVT +K+GRMKAF TT+ +RLP
Sbjct: 62 VVGESVFVENKTGASGNIGMTAVAQSAPDGYTLLMGNVSTNAINEFIYAKQLKVSPSQDLVPITMIASIPNIIVSGPNFPPNNLKELVAYAKQRPGELNFSAPLGGYSNLDMLDFNRQAGISMVNIPSKGAGSSQTSIIAGEIHFSILNAATVTEIIKSGRMKAFATTSATRLP 235
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A3N5WKU2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WKU2_9PROT) HSP 1 Score: 189 bits (479), Expect = 3.680e-56 Identity = 91/174 (52.30%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 4 LGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
LGQQ +DNR+GA+GNI VE+ A++ PDGYT+++ N+ST +INPI FAK K ++ K+L GVS L ++PN ++ P +LKE +DYAKARPGQLN+ P+G+YSHLDML + AG++MV++PSKGAG + ++ G+IH + N A+ VKAG++KAF TA RLPD
Sbjct: 75 LGQQVVIDNRTGAAGNIAVELVAQAQPDGYTLLVGNISTNSINPIMFAKRSKVNALKDLTGVSKLVAIPNFILGSPKIPATTLKEALDYAKARPGQLNFQAPLGSYSHLDMLALTAAAGVKMVHLPSKGAGETIPALLRGDIHITESNVASNIGAVKAGQVKAFAVTAAQRLPD 248
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A7C2YWM6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YWM6_9PROT) HSP 1 Score: 182 bits (462), Expect = 8.610e-54 Identity = 86/174 (49.43%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 4 LGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
LGQQ VDNR GA+GNI VE+ A++ PDGYT+++ N+ST +INPI FA+ +K ++ K+L GV+ L ++PN ++ P N+LKE I+YA+ARPGQLNY P+G+YSHLDML + AGI+MV++PS+GAG + ++ G+IH + N A+ V+AG++KA+ T++ RL +
Sbjct: 59 LGQQIVVDNRPGAAGNIAVELTAQAQPDGYTLLVGNISTNSINPILFARQMKVNAVKDLTGVTKLVAIPNFILGSPKLPANTLKEAIEYARARPGQLNYQAPLGSYSHLDMLALQAAAGIKMVHLPSRGAGETLPALLRGDIHITESNVASNIGAVRAGQIKAYAVTSEKRLDE 232
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A1F4DRR8_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DRR8_9PROT) HSP 1 Score: 181 bits (460), Expect = 1.590e-53 Identity = 88/174 (50.57%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 4 LGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
LGQQ VDNR GA+GNI VE+ A++ PDGYT+++ N+ST +INP+ FAK +K ++ K+L GV+ L ++PN ++ P N+LKE I YAK RPGQLNY P+G+YSHLDML + AGI+MV++PS+GAG + ++ G+IH + N A+ V+AG++KAF T+ RL D
Sbjct: 61 LGQQVVVDNRPGAAGNIAVELTAQAQPDGYTLLVGNISTNSINPLLFAKQMKTNAIKDLAGVTKLVAIPNFILGSPKLPANTLKEAIAYAKERPGQLNYQAPLGSYSHLDMLALQAAAGIKMVHLPSRGAGETLTAMLRGDIHITESNVASNIGGVRAGQVKAFAVTSDKRLAD 234
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A7C3NPA8_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NPA8_9PROT) HSP 1 Score: 179 bits (455), Expect = 9.690e-53 Identity = 87/174 (50.00%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 4 LGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNPIGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
LGQQ VDNR GA+GNI VE+ A++ PDGYT+++ N+ST +INPI FA +K ++ K+L GV+ L ++PN ++ P N+LKE I YA+ RPGQLNY P+G+YSHLDML F + AGI+MV++PS+GAG + ++ G+IH + N A+ V+AG++KAF T+ RL +
Sbjct: 59 LGQQLVVDNRPGAAGNIAVELTAQAQPDGYTLLVGNISTNSINPILFAGKMKTNAIKDLTGVTKLVAIPNFILGSPKLPANTLKEAIAYARERPGQLNYQAPLGSYSHLDMLAFQAAAGIRMVHLPSRGAGETLPALLRGDIHITESNVASNIGAVRAGQIKAFAVTSDKRLAE 232
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A536ZDT2_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZDT2_9PROT) HSP 1 Score: 178 bits (452), Expect = 6.380e-52 Identity = 90/176 (51.14%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 4 LGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNP-IGAYSHLDMLEFMSKAGIQMVNVPSKG-AGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
LGQ F VDNR+GASGNI +E AK+ PDGYT+++ NVST AIN FA L+ S++L+G+S L +P++LVA ++FPPN++ E+I++AK PG+LNY++ IG Y HLDML F AGI ++++P KG AG +++GE+ SF+N A+ QVKAGR+KA TT +RLP+
Sbjct: 90 LGQPFVVDNRAGASGNIALEAEAKAAPDGYTLLVGNVSTNAINESTFAGVLQTQPSRDLVGISKLVEIPHVLVAATSFPPNTVAEVIEWAKKNPGKLNYASAGIGTYPHLDMLRFAKAAGIDVIHIPYKGGAGQMLPALMSGEVQLSFINLASTIEQVKAGRIKAIATTMPTRLPE 265
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A537A6I6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A6I6_9PROT) HSP 1 Score: 172 bits (437), Expect = 8.310e-50 Identity = 86/177 (48.59%), Postives = 124/177 (70.06%), Query Frame = 1
Query: 1 MLGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNP-IGAYSHLDMLEFMSKAGIQMVNVPSKG-AGSSFAPVIAGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
+LGQ F VDNR GASGNI +E AAK+ PDGYT+ + NVST AIN FA L S++L+G+S L +P++LVA ++FPPNS+ E+I++AK PG+LNY++ +G Y LDML + AGI+ ++P KG AG +++GE+ SF+N A+ Q++AGR+KA TT +R+P+
Sbjct: 77 VLGQPFVVDNRPGASGNIALEAAAKATPDGYTLEVGNVSTNAINESTFANVLPIKPSRDLVGISKLVEIPHVLVAATSFPPNSVAEMIEWAKRNPGKLNYASAGLGTYPQLDMLRLLKVAGIEATHIPYKGGAGQMLPALMSGEVQVSFINLASTIEQIRAGRLKALATTMPTRVPE 253
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Match: A0A537DK57_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DK57_9PROT) HSP 1 Score: 171 bits (432), Expect = 4.320e-49 Identity = 83/177 (46.89%), Postives = 124/177 (70.06%), Query Frame = 1
Query: 1 MLGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKTLKFDSSKELIGVSLLASVPNLLVAGSNFPPNSLKELIDYAKARPGQLNYSNP-IGAYSHLDMLEFMSKAGIQMVNVPSKGAGSSFAPVI-AGEIHASFLNAATVTPQVKAGRMKAFVTTAKSRLPD 525
+LGQ F VDNR+GASGNI +E AAK+ PDGYT+++ NVST AIN FA L+ S++L+G+S L +P+++VA +FPPNS+ E+I++AK PG+LNY++ +G Y LDML + AGI+ ++P KG + P + GE+ +F+N A+ Q++AGR+KA TT +R+P+
Sbjct: 74 VLGQPFVVDNRAGASGNIALEAAAKAAPDGYTLLVGNVSTNAINESTFAAVLQTRPSRDLVGISKLVEIPHVVVAAPSFPPNSVAEMIEWAKRNPGKLNYASAGLGTYPQLDMLRLLKAAGIEATHIPYKGGAAQMLPALMTGEVQVAFINLASTIEQIRAGRLKAIATTMPTRVPE 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54402.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54402.1.1 >prot_P-wetherbeei_contig54402.1.1 ID=prot_P-wetherbeei_contig54402.1.1|Name=mRNA_P-wetherbeei_contig54402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp MLGQQFGVDNRSGASGNIGVEMAAKSLPDGYTVVINNVSTGAINPIAFAKback to top mRNA from alignment at P-wetherbeei_contig54402:2..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54402.1.1 ID=mRNA_P-wetherbeei_contig54402.1.1|Name=mRNA_P-wetherbeei_contig54402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig54402:2..526+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54402:2..526+ >mRNA_P-wetherbeei_contig54402.1.1 ID=mRNA_P-wetherbeei_contig54402.1.1|Name=mRNA_P-wetherbeei_contig54402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig54402:2..526+ (Phaeothamnion wetherbeei SAG_119_79)back to top |