mRNA_P-wetherbeei_contig544.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig544.2.1
Unique NamemRNA_P-wetherbeei_contig544.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: D7FKK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKK2_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 5.410e-65
Identity = 134/271 (49.45%), Postives = 165/271 (60.89%), Query Frame = 3
Query:  225 AKRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLR 1037
            A +R+P+P+V PA++SRK+AR++VT FH L  E D V+  +A   + R  R   L  +LD++GG   YQ AS LS+S HN  KWV K LA                                   G+    PA   P      LRVLEVGAINT+LLDVPWL VRA+DLKSQHPRIEE DFF L+PA E+D V SSMVINCV T + R  ML   R+HLR+GGHLFL LPL CLT+S R +RE+ L  L + GF  V  +++PKVAFFCLR
Sbjct:    5 ATKRKPIPLVPPAIRSRKKARQIVTTFHKLEKEADEVSSSTAPDKQARLER---LERELDEMGGRQAYQSASLLSVSFHNTSKWVTKQLA-----------------------------------GKMGLRPANGEPP-----LRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLEPAGEYDVVSSSMVINCVPTAKGRHEMLVGYRSHLRNGGHLFLVLPLLCLTKSTRTTRESFLETLSRIGFMVVAKKETPKVAFFCLR 232          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A835YKU5_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU5_9STRA)

HSP 1 Score: 204 bits (520), Expect = 9.060e-57
Identity = 123/289 (42.56%), Postives = 153/289 (52.94%), Query Frame = 3
Query:  222 VAKRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVE--------PAAAHG 1064
            + K R+P+PV+ P +KSRKRAR++ T FH L  +   V  D  LS  E+++R   L+ +LD +GG + YQ AS LS+ +HN  KWV + L       A  AP                                          L +LEVGAIN +LL VPWL VRA+DL++ HPR+E  DFFDL P   FDA   +MV+NCV  P RRG MLA  R HLR GG L L LPL CLT SR  S     A+L  AGF+ V  R SP+VAF+ LRA          P  AHG
Sbjct:    1 MGKTRKPIPVLPPPLKSRKRARQITTAFHKLTKQQAQVKSDDGLSEREKQQRLTQLQRELDGIGGREAYQSASLLSVQYHNTSKWVTQQLEHMGMRPAKGAPP-----------------------------------------LNLLEVGAINDRLLSVPWLRVRAIDLRAAHPRVERADFFDLAPRGAFDAAALAMVLNCVPEPARRGAMLARLRRHLRPGGALLLALPLLCLTNSRCMSAPRFAAILAHAGFDVVAERRSPRVAFYVLRAAREPPPDGAPPRFAHG 248          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A662XLB4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLB4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.490e-55
Identity = 123/277 (44.40%), Postives = 153/277 (55.23%), Query Frame = 3
Query:  228 KRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAV----ARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVE 1046
            K R+P+ +  P MKSR++AR+V T FH L  ELD +    A  +A +P++R  +   L  +LD LGG   YQ+AS LS S H   KWV +LL +F                                         E  P  K   LRVLEVGAINT+LL  PWL VRA+DL S+H RIE+ DFF LKP+ EF  +VSSMV+NCV    +RG ML + RAHLR GG LFL LPL CL  S+  +      +L+  GF   EA+DSPKVAFFCL   E
Sbjct:   38 KSRKPLHIAPPRMKSRRKARQVTTEFHRLTHELDRLKQQKASTAADAPQQRTEKITELNARLDALGGRQAYQDASILSTSFHKTSKWVFQLLTRF-----------------------------------------ELRPKAKQPPLRVLEVGAINTQLLTCPWLDVRAIDLNSRHERIEQRDFFSLKPSGEFQVLVSSMVLNCVPGAAQRGEMLRLYRAHLREGGLLFLMLPLLCLRHSQFMTYLRFTQILEAVGFRVREAKDSPKVAFFCLERTE 273          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A2D4BN23_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN23_PYTIN)

HSP 1 Score: 200 bits (508), Expect = 8.750e-55
Identity = 120/278 (43.17%), Postives = 154/278 (55.40%), Query Frame = 3
Query:  234 RRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCL-RAVEPAAAHG 1064
            R PV + AP MKSR++AR++ T FH L  ELDAV ++  LS +E+ RR A L  Q+D +GG   YQ+AS LS S H   KWV +LL +                                          +  P  K   LR LEVGAINT+LL  PWL+VRA+DL S+H +IE+ DFF L+P+ E+D +VSSMVINCV     RG ML +   HLR GG  FL LPL CL  S+  +    + +L+  GF   E ++SPKVAFFCL R +E   A G
Sbjct:   20 RXPVHIAAPKMKSRRKARQITTEFHRLTHELDAVKKNDTLSRDEKTRRVAELNAQIDAIGGRSAYQDASILSTSFHKTSKWVFQLLTKM-----------------------------------------DRRPKSKEAPLRTLEVGAINTQLLSCPWLNVRAIDLNSKHEKIEQCDFFSLRPSGEYDVLVSSMVINCVPDAPSRGKMLQLSFQHLRPGGLFFLMLPLLCLHNSKYMTYVRFVEILKAVGFLVRETKESPKVAFFCLERPIESEGAMG 256          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: W2PYR3_PHYPN (Probable methyltransferase BMT2 homolog n=14 Tax=Phytophthora TaxID=4783 RepID=W2PYR3_PHYPN)

HSP 1 Score: 198 bits (503), Expect = 3.950e-54
Identity = 118/273 (43.22%), Postives = 151/273 (55.31%), Query Frame = 3
Query:  228 KRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVE 1046
            K R+ + +  P MKSR++AR+V T FH L  ELD + +  +L  E +++R A +  QL++LGG   YQ+AS LS S H   KWV +LL +F                                         E  P  K   LRVLEVGAINT+LL  PWL VRA+DL S+H RIE+ DFF LKP  EF  VVSSMV+NCV   ++RG ML + R HL+ GG LFL LPL CL  S+  +      +L+  GF   E +DSPKVAF CL  +E
Sbjct:   26 KSRKALHIAPPRMKSRRKARQVTTNFHRLTHELDRLKQHKSLD-ESQKQRIAEINRQLEELGGRQAYQDASILSTSFHRTSKWVFQLLTRF-----------------------------------------ELRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLKPEGEFQVVVSSMVLNCVPGADKRGEMLRLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFAKILEAVGFRVRETKDSPKVAFLCLERIE 256          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: H3GRM7_PHYRM (Probable methyltransferase BMT2 homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRM7_PHYRM)

HSP 1 Score: 197 bits (501), Expect = 1.040e-53
Identity = 117/276 (42.39%), Postives = 152/276 (55.07%), Query Frame = 3
Query:  228 KRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRR---RAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVE 1046
            K R+ + +  P MKSR++AR+V T FH L  ELD + +    +PE++++   R + +  QL+QLGG   YQ+AS L+ S H   KWV +LL +F                                         E  P  K   LRVLEVGAINT+LL  PWL VRA+DL S+H RIE+ DFF LKP  EF  +VSSMV+NCV   ++RG ML + R HL+ GG LFL LPL CL  S+  +      +L+  GF   E +DSPKVAFFCL   E
Sbjct:   33 KARKALHIAPPRMKSRRKARQVTTNFHRLTHELDRLKQQKPAAPEQQQQQNERLSEINKQLEQLGGRQAYQDASILNTSFHRTSKWVFQLLTRF-----------------------------------------ERRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLKPTGEFHVLVSSMVLNCVPGADKRGEMLRLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFTKILEAVGFRVRETKDSPKVAFFCLERTE 267          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A2P4Y049_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y049_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.180e-53
Identity = 118/276 (42.75%), Postives = 150/276 (54.35%), Query Frame = 3
Query:  228 KRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDS---ALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVE 1046
            K R+ + +  P MKSR++AR+V T FH L  ELD + +     A +  +R  R A +  QL++LGG   YQ+AS LS S H   KWV +LL +F                                         E  P  K   LRVLEVGAINT+LL  PWL VRA+DL S+H RIE+ DFF LKP  EF  +VSSMV+NCV   ++RG ML + R HL+ GG LFL LPL CL  S+  +      +L+  GF   E +DSPKVAFFCL  +E
Sbjct:   15 KSRKALHIAPPRMKSRRKARQVTTNFHRLTHELDRLKQQKPADAQAQAQRNERMAQVNKQLEELGGRQAYQDASILSTSFHRTSKWVFQLLTRF-----------------------------------------ELRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLKPTGEFQVLVSSMVLNCVPGADKRGEMLKLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFTKILEAVGFRVRETKDSPKVAFFCLERIE 249          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A0P1AR11_PLAHL (25S rRNA (Adenine(2142)-N(1))-methyltransferase, Bmt2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR11_PLAHL)

HSP 1 Score: 196 bits (497), Expect = 2.850e-53
Identity = 119/273 (43.59%), Postives = 147/273 (53.85%), Query Frame = 3
Query:  228 KRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVE 1046
            K R+ + +  P MKSR++AR V+T FH L  ELD + +      E R+ R A +  +L +LGG   YQ+AS LS S H   KWV +LL +F                                         E  P  K   L VLEVGAINT+LL  PWL+VRA+DLKS+H RIE+ DFF LKPA EF  VVSSMV+NCV    +RG ML + R HL  GG LFL LPL CL  S+  +      +L+  GF   E +DSPKVAFFCL   E
Sbjct:   26 KSRKALHIAPPRMKSRRKARNVITKFHRLTHELDRLEQQKLDEVETRKLRIAEINQELIELGGRQAYQDASILSTSFHRTSKWVFRLLTRF-----------------------------------------ELRPKAKQPPLPVLEVGAINTQLLSCPWLNVRAIDLKSRHERIEQCDFFSLKPAGEFQIVVSSMVLNCVPGAVKRGQMLRLYREHLMDGGLLFLMLPLLCLRHSKFMTYSRFTKILEAVGFRVRETKDSPKVAFFCLERTE 257          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A067CLA4_SAPPC (Probable methyltransferase BMT2 homolog n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLA4_SAPPC)

HSP 1 Score: 184 bits (466), Expect = 3.640e-49
Identity = 116/274 (42.34%), Postives = 148/274 (54.01%), Query Frame = 3
Query:  237 RPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAVEPAAA 1058
            R VP+  P +KSR+RAR + T FH +  EL+ +    A   +E + R A L  +L  LGG  VYQ+AS LS S H   KWV  LL +F                                            P  K   L VLEVGAINT+LL  PWL+V+A+DL ++H +I++ DFFD+     FD VVSSMVINCV TPE+RG ML     HL+  GH FL LPL CLT S   + +   A+L + GFE  E +++PK+AFFCLR V PA A
Sbjct:   11 RKVPIGPPPVKSRRRAREITTEFHRVTHELNRL--QDATKDDEAKARQAELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFG-----------------------------------------LRPGKKQPPLEVLEVGAINTQLLVCPWLNVQAIDLIARHAKIQQLDFFDVPFTKTFDVVVSSMVINCVPTPEKRGEMLQRTWRHLKDDGHFFLMLPLLCLTNSNYMTVDHFEAILTRVGFEIREKKETPKIAFFCLRKV-PATA 240          
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Match: A0A1V9ZE39_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZE39_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.890e-48
Identity = 119/277 (42.96%), Postives = 145/277 (52.35%), Query Frame = 3
Query:  237 RPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPEERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTAAAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRVLEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSSMVINCVTTPERRGT--------MLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALLAVLQQAGFEPVEARDSPKVAFFCLRAV 1043
            R VP+  P +KSR+RAR + T FH +  EL+ +      S E+   R A L  +L  LGG  VYQ+AS LS S H   KWV  LL +F                                         +  P  K   L VLEVGAINT+LL  PWL+V A+DL ++HP+I + DFFDL     FD VVSSMVINCV TPE+RG+        ML     HL  GGH FL LPL CLT S   + E   AVL + GFE  E +DSPK+AFFCL+ V
Sbjct:   10 RKVPIGPPPVKSRRRAREITTEFHRVTHELNRLQE----SKEKDATRQAELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKF-----------------------------------------DLRPKKKQPPLEVLEVGAINTQLLVCPWLNVDAIDLIARHPKIRQLDFFDLPFTKTFDVVVSSMVINCVPTPEKRGSVPMAISGEMLQSTWRHLNEGGHFFLMLPLLCLTNSNFMTVEHFEAVLVRIGFEIREKKDSPKIAFFCLKKV 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig544.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKK2_ECTSI5.410e-6549.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKU5_9STRA9.060e-5742.56Putative methyltransferase-domain-containing prote... [more]
A0A662XLB4_9STRA3.490e-5544.40Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A2D4BN23_PYTIN8.750e-5543.17Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
W2PYR3_PHYPN3.950e-5443.22Probable methyltransferase BMT2 homolog n=14 Tax=P... [more]
H3GRM7_PHYRM1.040e-5342.39Probable methyltransferase BMT2 homolog n=1 Tax=Ph... [more]
A0A2P4Y049_9STRA1.180e-5342.75Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
A0A0P1AR11_PLAHL2.850e-5343.5925S rRNA (Adenine(2142)-N(1))-methyltransferase, B... [more]
A0A067CLA4_SAPPC3.640e-4942.34Probable methyltransferase BMT2 homolog n=2 Tax=Sa... [more]
A0A1V9ZE39_9STRA2.890e-4842.96Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig544contigP-wetherbeei_contig544:6353..9135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKK2
PFAMsBmt2
Model size2351
Max annot lvl2759|Eukaryota
KEGG koko:K18849
Hectar predicted targeting categorymitochondrion
Exons2
Evalue3.31e-68
EggNOG OGs297K0@1|root,2REJX@2759|Eukaryota
EC2.1.1.286
Description25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2
Cds size1437
COG categoryS
BRITEko00000,ko01000,ko03009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.8458164-UTR-P-wetherbeei_contig544:6352..70541683186812.8458164-UTR-P-wetherbeei_contig544:6352..7054Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig544 6353..7054 -
1683186812.8798032-UTR-P-wetherbeei_contig544:8923..91351683186812.8798032-UTR-P-wetherbeei_contig544:8923..9135Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig544 8924..9135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.8577452-CDS-P-wetherbeei_contig544:7054..73841683186812.8577452-CDS-P-wetherbeei_contig544:7054..7384Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig544 7055..7384 -
1683186812.8672373-CDS-P-wetherbeei_contig544:7816..89231683186812.8672373-CDS-P-wetherbeei_contig544:7816..8923Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig544 7817..8923 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig544.2.1prot_P-wetherbeei_contig544.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig544 7055..8923 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig544.2.1

>prot_P-wetherbeei_contig544.2.1 ID=prot_P-wetherbeei_contig544.2.1|Name=mRNA_P-wetherbeei_contig544.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=479bp
MGGVAKRRRPVPVVAPAMKSRKRARRVVTGFHALNAELDAVARDSALSPE
ERRRRAAALRLQLDQLGGFDVYQEASNLSLSHHNPIKWVVKLLAQFHPTA
AAAAPVTAGRPVSAPLTATGAFSAASSVAGESSSSPAEATPIPKPKLLRV
LEVGAINTKLLDVPWLSVRAVDLKSQHPRIEEYDFFDLKPAAEFDAVVSS
MVINCVTTPERRGTMLAMCRAHLRHGGHLFLTLPLQCLTRSRRCSREALL
AVLQQAGFEPVEARDSPKVAFFCLRAVEPAAAHGGGSSGHGESNGGGRNS
RKKSGGGDDDRSDNMNGHGGGGRSSGAGGIGIGSTKTANDGRRRRHSGKE
GGNGTSKGGGGGTGNSRNPKPSLPPLPALPPPPAPPPLPAPLPSASRAAA
PPRGPAPAARRLPRSAAASAAPRAPAAPLRPGGRPRFLRWRRRRCWWPLG
RRRPAAAARSRRCAARSSRRHQGYSTRR*
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mRNA from alignment at P-wetherbeei_contig544:6353..9135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig544.2.1 ID=mRNA_P-wetherbeei_contig544.2.1|Name=mRNA_P-wetherbeei_contig544.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2783bp|location=Sequence derived from alignment at P-wetherbeei_contig544:6353..9135- (Phaeothamnion wetherbeei SAG_119_79)
TCCCTCCGTTGCTATCGATACAAATTTGACATTGAGAGGAGAAAGAGAGA ATATGGTGCCTTTGGAGTCCTGAGGTCCTGCCAAAAGGTGCAGTGGTAAC CGGGAGTTCCCTCGCTCTTTCGCCTATTTCATAGGCTTCAACGAACCTCA CCTCTTTTCTCCTGCGCAAACTTTGCGGTTCTTCAGGCTGGTGCCATAGG TGCCTGTTTGCGATGGGCGGCGTCGCGAAGCGGAGGCGTCCCGTGCCGGT GGTCGCCCCCGCGATGAAGAGTCGGAAGCGGGCCCGGCGCGTCGTCACGG GATTCCATGCCCTAAACGCGGAGCTCGATGCCGTCGCGCGCGACTCGGCC CTCTCTCCCGAGGAGCGCCGCCGCCGTGCCGCCGCACTCCGTCTGCAGCT AGACCAGCTCGGCGGTTTTGACGTTTATCAGGAGGCTTCTAATCTGAGTC TAAGTCACCACAACCCCATCAAATGGGTAGTCAAGTTGCTTGCCCAATTC CATCCAACGGCGGCGGCGGCTGCTCCGGTGACAGCGGGAAGGCCGGTCTC GGCCCCACTGACGGCGACGGGGGCATTTTCAGCCGCCTCTTCAGTGGCGG GCGAATCGTCGTCGTCTCCGGCGGAGGCGACGCCAATACCAAAACCAAAG CTGCTGCGGGTGCTCGAAGTCGGTGCCATCAACACAAAGCTGCTCGATGT GCCGTGGCTCTCCGTCCGCGCCGTCGACCTCAAGTCGCAGCACCCCCGTA TCGAGGAGTATGACTTCTTCGACCTCAAACCCGCCGCCGAATTCGATGCC GTCGTCTCGTCCATGGTCATCAACTGCGTCACGACGCCCGAGCGGCGCGG TACCATGCTGGCGATGTGCCGTGCCCACCTCCGCCACGGCGGCCACCTGT TCCTGACGCTGCCGCTGCAGTGCCTGACGCGGTCGCGCCGCTGCAGCCGC GAGGCGCTGCTGGCGGTGCTGCAGCAAGCAGGCTTCGAGCCGGTCGAGGC GCGAGATAGCCCCAAGGTGGCCTTTTTCTGCCTGCGCGCCGTCGAGCCCG CCGCTGCGCACGGCGGCGGGAGCAGTGGTCACGGCGAAAGCAATGGCGGC GGAAGAAACAGCCGCAAAAAAAGCGGCGGCGGCGATGACGACAGGAGCGA CAACATGAACGGCCACGGCGGCGGCGGGAGAAGCAGCGGGGCCGGTGGCA TCGGCATTGGCAGCACGAAGACAGCGAATGACGGCCGAAGGCGACGCCAC AGTGGAAAGGAGGGCGGCAACGGCACTAGCAAAGGCGGCGGCGGCGGCAC CGGGAATTCAAGAAATCCGGTGGGCGATAAGGCTGCCGGGGTGTATCGCG ATTTTGCTGTTTTGTTGTAAAGTACTCGGCTGTTGATTGCATAACATCCT GCTGTTAAAAGGCTAAACCATTCAGAATGACATCCATTGACAACGCTCAT TTCCGTATGTCTTTGTTGGATTGAAGCTGGTTTTCCGCCAGCAATAGCCA TTTTGAGTGGTTCATGCAATGCAGTGAACATGGATTTGTGCGTAGCCCTT TGGTGAATCACTTTTAACTCCAGCATTTACCCAAATTCAGCTGTTTAAAA GGAGTTTCGAGGACATAAAAAGTCATCATTCCTTCGCACGCTGGAGGTTG GATCGCTAGATTTTCTGCCACTTACGGCGCAGTGCTGTTTGGTCCGCCCA CACCTTCTGGGAGAGGCATTTCCACGCTCGAAACTATCTCTTCCGCCGCA GAAGCCATCGCTGCCGCCTCTGCCGGCACTACCTCCCCCGCCGGCACCGC CGCCTCTGCCGGCGCCGCTGCCATCGGCGTCTCGAGCAGCAGCCCCTCCC CGCGGGCCAGCCCCAGCTGCCAGACGCCTTCCTCGTTCCGCCGCAGCGTC AGCCGCGCCGCGAGCGCCCGCAGCGCCTCTCCGGCCCGGGGGCCGTCCCA GATTCCTCCGCTGGCGGCGGCGCCGCTGTTGGTGGCCGCTTGGGCGCCGT CGGCCTGCCGCCGCAGCTCGCTCGCGCCGATGTGCAGCACGCTCGTCACG CAGGCATCAGGGCTATAGCACTCGACGATGACGCCGCCAGCCGCGCTGCC GCTGCCGTTGACGACGCCGCCGCCGCCACTGCCACCGAGGGTTCCGCCGC CAGTTTCGCCGTTTCTACCGCCGCCGCCGGGCTGGCGGCTCCAGAAGGTG ACGAGAGCGCGGAGGCCGTTAATGCGGAGGCCCTGCCGCAGCAGCGGCGG CGCGCCACTGCTGGCGGCCTCACCATTCGGCACAAAGCGCTCGGAGGCGC CGGCGGCGCGCGCCGCGGCGGTCGCTGCCGCTGGCTCACGCACGTCGAGC TCGGTGTAGGCGCCTACCCACGGCCGCGACGGGTCGAAACACAGCTCTGC GCGCAGCTCCCGTTTCGAGTGACGCGCTTCAGCGGTCGTGTGGGCAGCGA TGGCGGCGGCGGCGGCGGTGACAGAGGGGGCGACGGTGGTGGTTGCAAAC ATCGTGGCGCCGGCGGCTGGCTTGGCAGCAGCGGCAGCCGTCGCAGCTTT GCCGCTGCTGCTCTTGTAGTGCAGGGCGATGCAGAGACAGATGCGGTGGG CGGCGGCGTTGCGTGCCTCACCCTTGGCAAACTGGAGGAGGCACCTCCCT GCCGCCACAAGAAAACGAGCGAGAGAGCGAAAAGAGGTAAAGCGTCAAAA AAGGGAGGGTTGGGCCATGCTCGTGTAGAATATCCGAATCAGCTGCGATC TTCAGCACGCTAGTAAGGATGCTCCTGTCGTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig544:6353..9135-

>mRNA_P-wetherbeei_contig544.2.1 ID=mRNA_P-wetherbeei_contig544.2.1|Name=mRNA_P-wetherbeei_contig544.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1437bp|location=Sequence derived from alignment at P-wetherbeei_contig544:6353..9135- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGGCGTCGCGAAGCGGAGGCGTCCCGTGCCGGTGGTCGCCCCCGC
GATGAAGAGTCGGAAGCGGGCCCGGCGCGTCGTCACGGGATTCCATGCCC
TAAACGCGGAGCTCGATGCCGTCGCGCGCGACTCGGCCCTCTCTCCCGAG
GAGCGCCGCCGCCGTGCCGCCGCACTCCGTCTGCAGCTAGACCAGCTCGG
CGGTTTTGACGTTTATCAGGAGGCTTCTAATCTGAGTCTAAGTCACCACA
ACCCCATCAAATGGGTAGTCAAGTTGCTTGCCCAATTCCATCCAACGGCG
GCGGCGGCTGCTCCGGTGACAGCGGGAAGGCCGGTCTCGGCCCCACTGAC
GGCGACGGGGGCATTTTCAGCCGCCTCTTCAGTGGCGGGCGAATCGTCGT
CGTCTCCGGCGGAGGCGACGCCAATACCAAAACCAAAGCTGCTGCGGGTG
CTCGAAGTCGGTGCCATCAACACAAAGCTGCTCGATGTGCCGTGGCTCTC
CGTCCGCGCCGTCGACCTCAAGTCGCAGCACCCCCGTATCGAGGAGTATG
ACTTCTTCGACCTCAAACCCGCCGCCGAATTCGATGCCGTCGTCTCGTCC
ATGGTCATCAACTGCGTCACGACGCCCGAGCGGCGCGGTACCATGCTGGC
GATGTGCCGTGCCCACCTCCGCCACGGCGGCCACCTGTTCCTGACGCTGC
CGCTGCAGTGCCTGACGCGGTCGCGCCGCTGCAGCCGCGAGGCGCTGCTG
GCGGTGCTGCAGCAAGCAGGCTTCGAGCCGGTCGAGGCGCGAGATAGCCC
CAAGGTGGCCTTTTTCTGCCTGCGCGCCGTCGAGCCCGCCGCTGCGCACG
GCGGCGGGAGCAGTGGTCACGGCGAAAGCAATGGCGGCGGAAGAAACAGC
CGCAAAAAAAGCGGCGGCGGCGATGACGACAGGAGCGACAACATGAACGG
CCACGGCGGCGGCGGGAGAAGCAGCGGGGCCGGTGGCATCGGCATTGGCA
GCACGAAGACAGCGAATGACGGCCGAAGGCGACGCCACAGTGGAAAGGAG
GGCGGCAACGGCACTAGCAAAGGCGGCGGCGGCGGCACCGGGAATTCAAG
AAATCCGAAGCCATCGCTGCCGCCTCTGCCGGCACTACCTCCCCCGCCGG
CACCGCCGCCTCTGCCGGCGCCGCTGCCATCGGCGTCTCGAGCAGCAGCC
CCTCCCCGCGGGCCAGCCCCAGCTGCCAGACGCCTTCCTCGTTCCGCCGC
AGCGTCAGCCGCGCCGCGAGCGCCCGCAGCGCCTCTCCGGCCCGGGGGCC
GTCCCAGATTCCTCCGCTGGCGGCGGCGCCGCTGTTGGTGGCCGCTTGGG
CGCCGTCGGCCTGCCGCCGCAGCTCGCTCGCGCCGATGTGCAGCACGCTC
GTCACGCAGGCATCAGGGCTATAGCACTCGACGATGA
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