mRNA_P-wetherbeei_contig544.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: D7FYU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU1_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 2.250e-11 Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 10 PSRGHSLVMEAVMILLSPVRQPLQPPPPAAVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
PS+ H LVMEA++ILLSP P +++ G+ W EAR +L P L + VD +++PP N+ L+AY+ H WP
Sbjct: 903 PSQSHMLVMEALIILLSPETVFHNHIPLSSLRGVTWTEARHILGNPDKLCAAIARVDSFSIPPANLSTLQAYIGHDGWP 981
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: A0A329S669_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S669_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.260e-11 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 7 APSRGHSLVMEAVMILLSPVRQPLQPPPPA-AVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
APS +VMEAV++LL+PV+ P A + ++WR +RRLL PA L +++ VD+ T+PP N++ALE YL H WP
Sbjct: 1116 APSPALVVVMEAVLVLLTPVKVYEGPSQSEIATSSVSWRLSRRLLAQPAFLRAKLQQVDVTTIPPVNLVALERYLRHSWWP 1196
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: A0A485LKR0_9STRA (Aste57867_22122 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKR0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.070e-10 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 10 PSRGHSLVMEAVMILLSPVRQPLQPPPPAAVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
P G LVMEAV+ILL+P++Q P + + + WR +RRLL P +LAE+++++D+ +P N M L+AY+ H WP
Sbjct: 1038 PPVGLVLVMEAVLILLTPMQQYASPD--CSTSTVTWRLSRRLLATPHLLAEKLQAIDLPHIPINNTMVLKAYIEHCDWP 1114
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: D0NBL0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NBL0_PHYIT) HSP 1 Score: 65.5 bits (158), Expect = 1.470e-10 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 1 ACAPSRGHSLVMEAVMILLSPVR---QPLQPPPPAAVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
A APS +VMEAV++LL+P + P Q + ++WR +RRLL PA L +++ VD+ T+PP N++ALE YL H WP
Sbjct: 790 APAPSPAFVVVMEAVIVLLTPGKIYEGPSQSD--VGTSSVSWRLSRRLLAQPAFLRAKLQQVDVTTIPPVNLLALERYLRHSLWP 872
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: A0A833SMC2_PHYIN (IQ calmodulin binding motif-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SMC2_PHYIN) HSP 1 Score: 65.5 bits (158), Expect = 1.470e-10 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 1 ACAPSRGHSLVMEAVMILLSPVR---QPLQPPPPAAVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
A APS +VMEAV++LL+P + P Q + ++WR +RRLL PA L +++ VD+ T+PP N++ALE YL H WP
Sbjct: 1108 APAPSPAFVVVMEAVIVLLTPGKIYEGPSQSD--VGTSSVSWRLSRRLLAQPAFLRAKLQQVDVTTIPPVNLLALERYLRHSLWP 1190
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: W2R6E6_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R6E6_PHYPN) HSP 1 Score: 64.7 bits (156), Expect = 2.750e-10 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 7 APSRGHSLVMEAVMILLSPVRQPLQPPPPA-AVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
+PS +VMEAV++LL+P + P A + ++WR +RRLL PA L ++ VD+ T+PP N++ALE YL H WP
Sbjct: 1108 SPSPALVVVMEAVIVLLTPGKVYEGPSQSEIATSSVSWRLSRRLLGQPAFLRSKLHHVDVTTIPPANLLALERYLRHSLWP 1188
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: A0A0W8BVJ0_PHYNI (PH domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BVJ0_PHYNI) HSP 1 Score: 64.7 bits (156), Expect = 2.760e-10 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 7 APSRGHSLVMEAVMILLSPVRQPLQPPPPA-AVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
+PS +VMEAV++LL+P + P A + ++WR +RRLL PA L ++ VD+ T+PP N++ALE YL H WP
Sbjct: 2077 SPSPALVVVMEAVIVLLTPGKVYEGPSQSEIATSSVSWRLSRRLLGQPAFLRSKLHHVDVTTIPPANLLALERYLRHSLWP 2157
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: H3H2Q5_PHYRM (PH domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2Q5_PHYRM) HSP 1 Score: 64.3 bits (155), Expect = 3.770e-10 Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 7 APSRGHSLVMEAVMILLSPVRQPLQPPPPA-AVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
AP+ +VMEAV++LL+P + P A + ++WR +RRLL PA L +++ VD+ T+PP N++ALE ++ HP WP
Sbjct: 2916 APNPALVVVMEAVIVLLTPGKVYEGPSQSEIATSSVSWRLSRRLLAQPAFLRAKLQQVDISTIPPVNLVALERFVRHPRWP 2996
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: A0A6G0XY69_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XY69_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 9.560e-10 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 10 PSRGHSLVMEAVMILLSPVRQPLQPPPPAAVAGIAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
P G LVMEA++ILL+P ++ P +A + + WR +RRLL AP + A+++ ++D+ +P N M L+ Y+ H WP
Sbjct: 1014 PHIGLVLVMEAILILLTPTQRYTSPE--SATSAVTWRLSRRLLAAPQLFADKLLALDLRQIPADNTMVLKEYIEHGEWP 1090
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Match: A0A662WDJ4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDJ4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.430e-9 Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 7 APSRGHSLVMEAVMILLSPVRQPLQPPPPAAVAG----IAWREARRLLQAPAVLAERVKSVDMWTVPPGNVMALEAYLAHPAWP 246
APS +VMEAV++LL+P + P A A ++WR ARRLL PA L +++ VD TVP N+ ALE Y+ P WP
Sbjct: 1131 APSAALIVVMEAVIVLLTPSKSYEGPSCEATAAASTSAVSWRLARRLLAQPAFLLSKLQQVDPTTVPSSNLTALERYVRLPNWP 1214 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig544.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig544.1.1 >prot_P-wetherbeei_contig544.1.1 ID=prot_P-wetherbeei_contig544.1.1|Name=mRNA_P-wetherbeei_contig544.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp ACAPSRGHSLVMEAVMILLSPVRQPLQPPPPAAVAGIAWREARRLLQAPAback to top mRNA from alignment at P-wetherbeei_contig544:213..557+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig544.1.1 ID=mRNA_P-wetherbeei_contig544.1.1|Name=mRNA_P-wetherbeei_contig544.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig544:213..557+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig544:213..557+ >mRNA_P-wetherbeei_contig544.1.1 ID=mRNA_P-wetherbeei_contig544.1.1|Name=mRNA_P-wetherbeei_contig544.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig544:213..557+ (Phaeothamnion wetherbeei SAG_119_79)back to top |