mRNA_P-wetherbeei_contig5436.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5436.2.1
Unique NamemRNA_P-wetherbeei_contig5436.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F4BIF7_9PROT (Acyltransferase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4BIF7_9PROT)

HSP 1 Score: 409 bits (1052), Expect = 1.990e-142
Identity = 197/269 (73.23%), Postives = 231/269 (85.87%), Query Frame = 1
Query:    7 VKVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRI 813
            V++AA+QMVSAPEVA N+EAA RLVAQAA +GA+LVALPEYFC+LGRHETDK+++ E D     G GPIQ  LA+ A+RH +WLVGGT+PIA +DP RVRSAC VYD+AGRRVARYDK+HLF+F  GAE YDETRT++PGD P+T+ESP+GRLGLSVCYD+RFPELYR    +D+WFVPSAFTA TG AHWE LLRARA+ENLCYVVAPAQGG H NGRRTHGH+M+VDPWGEV+AE AEGE VV+A+ D  R+A VR SLPALDNRR+
Sbjct:    4 VRIAAVQMVSAPEVAPNLEAARRLVAQAADEGAQLVALPEYFCVLGRHETDKLRLRERD-----GAGPIQDALAEMAQRHRLWLVGGTVPIACADPARVRSACLVYDNAGRRVARYDKMHLFTFHAGAERYDETRTIEPGDAPITLESPFGRLGLSVCYDLRFPELYRRCGKVDLWFVPSAFTAVTGAAHWETLLRARAIENLCYVVAPAQGGLHANGRRTHGHSMVVDPWGEVLAEQAEGEGVVLAEADAGRLAEVRQSLPALDNRRL 267          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F4FD64_9PROT (Acyltransferase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FD64_9PROT)

HSP 1 Score: 404 bits (1039), Expect = 1.770e-140
Identity = 199/268 (74.25%), Postives = 227/268 (84.70%), Query Frame = 1
Query:   10 KVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRI 813
            +VAA+QMVSAPEVA N+E+A RLVAQAAA+GA+LVALPEYFCILGRHE+DKVKV E D     G GPIQ  LA  A+R+ +WLVGGT+PIA +DPGR RSAC V+DDAGRRVARYDK+HLF+F  G E YDE RT++PG  PV VESP+GRLGLSVCYD+RFPELYR    +D+WFVPSAFTA TG AHWE LLRARA+ENLCYVVAPAQGG H NGRRTHGH+M+V PWGEV+AEHAEGE VV+ADID  R+A VR SLPALDNRR+
Sbjct:    3 RVAAVQMVSAPEVAPNLESARRLVAQAAAEGARLVALPEYFCILGRHESDKVKVRERD-----GAGPIQDALAAMAQRNRVWLVGGTVPIACADPGRARSACLVFDDAGRRVARYDKMHLFTFSAGDERYDEARTIEPGVEPVAVESPFGRLGLSVCYDLRFPELYRRFQKVDIWFVPSAFTAVTGAAHWETLLRARAIENLCYVVAPAQGGLHANGRRTHGHSMVVGPWGEVLAEHAEGEGVVVADIDTDRLAEVRQSLPALDNRRL 265          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F4AZ95_9PROT (Acyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AZ95_9PROT)

HSP 1 Score: 388 bits (996), Expect = 6.660e-134
Identity = 190/268 (70.90%), Postives = 219/268 (81.72%), Query Frame = 1
Query:   10 KVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRI 813
            ++AA+QMVSAPEVA N+ AA RLVAQAA  GA LVALPEYFCILGRHE+DKV+V E D     G GPIQ  LA  A+RH +WLVGGT+PI  +DP R RSAC V+D  GRRVARYDKIHLF+F  G E YDE R+++PGDTPV ++SP+GRLGLS+CYD+RFPELYRS+ P+D+WFVPSAFTATTG AHWE LLRARA+ENL YVVAPAQGG H NGRRTHGHT+I  PWGEV+AE AEGE VVIA+ID  R+A VR SLP   NRR+
Sbjct:    5 RIAAVQMVSAPEVAPNLAAAARLVAQAAGDGADLVALPEYFCILGRHESDKVRVRERD-----GSGPIQDALAGMAQRHRLWLVGGTVPIECADPARARSACLVFDRDGRRVARYDKIHLFTFDAGDERYDEARSIEPGDTPVALDSPFGRLGLSICYDLRFPELYRSDPPVDVWFVPSAFTATTGAAHWETLLRARAIENLAYVVAPAQGGLHANGRRTHGHTLIAGPWGEVLAEQAEGEGVVIAEIDANRLAEVRKSLPVHSNRRL 267          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F2UWX2_9BACT (Acyltransferase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b TaxID=1797193 RepID=A0A1F2UWX2_9BACT)

HSP 1 Score: 376 bits (966), Expect = 2.450e-129
Identity = 188/271 (69.37%), Postives = 220/271 (81.18%), Query Frame = 1
Query:    1 APVKVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRI 813
            AP+++AA+QMVSAPEVA N+EAA RLVA+AAA+GA+LVALPE F ++      KV+  E D     G GPIQ FLA  ARRH +WLVGGT PIA  DPGR+RSAC VYDDAGRRVARYDK+HLF F QG E YDETRT++PG  PV VESP+GR+ LSVCYDVRFPELYR  +P+ +  VPSAFT  TGRAHW VLLRARA+ENL YV+APAQGG HP+GR T+GH+MIVDPWG V+AE AEGEAVV+A+ID AR+A VR SLPALD+RR+
Sbjct:    2 APIRIAAVQMVSAPEVAPNLEAAARLVARAAAEGARLVALPENFYLISGDAAAKVRAREPD-----GRGPIQDFLAATARRHKLWLVGGTCPIACDDPGRIRSACLVYDDAGRRVARYDKMHLFRFAQGEERYDETRTLEPGTAPVAVESPFGRIALSVCYDVRFPELYRRFAPLALIAVPSAFTVPTGRAHWHVLLRARAIENLAYVIAPAQGGMHPDGRLTYGHSMIVDPWGSVLAERAEGEAVVLAEIDSARLAEVRQSLPALDHRRL 267          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F3YCX2_9PROT (Acyltransferase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YCX2_9PROT)

HSP 1 Score: 368 bits (945), Expect = 5.250e-126
Identity = 179/267 (67.04%), Postives = 218/267 (81.65%), Query Frame = 1
Query:   13 VAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRI 813
            VAA+QMVSAPEVA N+EAA RL+A AAA GAKLVALPEYFCILGRHETDKV V EAD     G GPIQ FLA AA R+ +WLVGGT+P+ S +  +VRSAC V+D  GRRVARYDK+HLF    G + +DE+RT++PG+ PV +++P+GR+GLSVCYD+RFPELYR+   +D   VPSAFT+ TG AHWE+L+RARAVEN CYV+APAQGG HPNGRRTHGH+MIVDPWGEV+A  AEGE +V+A++D  R+A VR SLPAL +R++
Sbjct:   16 VAAVQMVSAPEVAPNLEAAARLIAAAAAAGAKLVALPEYFCILGRHETDKVMVREAD-----GYGPIQDFLAGAASRNRVWLVGGTIPLVSLNEEKVRSACLVFDSEGRRVARYDKMHLFGLDLGEQRFDESRTIEPGEQPVAIDTPFGRIGLSVCYDLRFPELYRALGVVDALLVPSAFTSVTGAAHWELLVRARAVENQCYVIAPAQGGLHPNGRRTHGHSMIVDPWGEVLASRAEGEGIVLAELDAGRLAEVRQSLPALQHRKM 277          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F4F475_9PROT (Acyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F475_9PROT)

HSP 1 Score: 358 bits (919), Expect = 3.570e-122
Identity = 176/268 (65.67%), Postives = 212/268 (79.10%), Query Frame = 1
Query:    7 VKVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRR 810
            V+VAA+QMVSAPE+A N+E A RLVA AAA GA+LVALPE F ++GR E DK+++ E D    GG GPIQ FLA+ ARRH +W+VGGT PIA +D  R+RSAC V+DD+GRRVARYDK+HLF F+  AE YDE+RT++PG+ PV +ESP+GR+ LS+CYDVRFPELYR     D+ FVPSAFTA TG AHWE LLRARA+EN  YVVAPAQGG H +GRRT GH+MIVDPWG V+A   EGE VV+A++D AR+  VR  LPAL NRR
Sbjct:    4 VRVAALQMVSAPELAPNLETAARLVAAAAAAGARLVALPENFYLIGRAEGDKLRLREPD----GGAGPIQGFLAECARRHRVWIVGGTAPIACADASRMRSACLVFDDSGRRVARYDKMHLFRFKSEAESYDESRTLEPGERPVALESPFGRMALSICYDVRFPELYRGLGDFDLMFVPSAFTAPTGAAHWETLLRARAIENQAYVVAPAQGGLHASGRRTWGHSMIVDPWGAVIASRDEGEGVVLAEVDPARVREVRAELPALANRR 267          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A537BLE9_9PROT (Carbon-nitrogen hydrolase family protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BLE9_9PROT)

HSP 1 Score: 356 bits (914), Expect = 1.990e-121
Identity = 173/268 (64.55%), Postives = 212/268 (79.10%), Query Frame = 1
Query:   10 KVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRI 813
            +VAA+QMVS PEV AN+E+A RL+A AAA GA+LVALPE F ++GRHE DKV+V E + +     GPIQ+FLA AARRH +W+VGGT PI+ +DPGR+RSAC V+DD GRRVARYDK+HLF F  G E YDE+RT++ G++ V V+SP+GRL LSVCYDVRFPELYR     D  FVPSAFT  TG AHWE LLRARA+EN  YV+APAQGG H +GRRT+GH+MIVDPWG+V+A   EGE V++A+ID  R+  VR SLPA+ NRR+
Sbjct:    5 RVAALQMVSTPEVMANLESADRLIAAAAAAGARLVALPENFYLIGRHEADKVRVREPEGE-----GPIQSFLAAAARRHRVWIVGGTAPISCADPGRIRSACLVFDDTGRRVARYDKMHLFRFEAGDERYDESRTLEAGESAVAVQSPFGRLALSVCYDVRFPELYRELGDFDAMFVPSAFTVPTGAAHWETLLRARAIENQAYVIAPAQGGLHASGRRTYGHSMIVDPWGQVLAVRPEGEGVLLAEIDTGRVQEVRASLPAVANRRL 267          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A1F4CDR7_9PROT (Acyltransferase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4CDR7_9PROT)

HSP 1 Score: 356 bits (914), Expect = 3.350e-121
Identity = 170/267 (63.67%), Postives = 211/267 (79.03%), Query Frame = 1
Query:   10 KVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRR 810
            +VAA+QMVS PEV AN+ AA +L+A+A +QGA LVALPEYFC++G  ++DKV V E       G GP+Q FLA  A R+G+WLVGGT P+A  DPGRVR+AC V+D+ GRR+ RYDKIHLF F+  AE YDE  T++PG+  V ++SP+GRLGLSVCYD+RFPELYRS +P+D+ F PSAFT  TG+AHWE LLRARA+E+L YVVAPAQGGTHP+GRRT GH+MI+DPWGE++A    G  V +ADID ARIA VR SLPAL +R+
Sbjct:    6 RVAAVQMVSGPEVQANLAAADQLIAEAVSQGASLVALPEYFCVMGMRDSDKVAVREPL-----GSGPVQDFLATTAARYGVWLVGGTTPLACPDPGRVRNACLVHDEKGRRIGRYDKIHLFGFQNEAERYDEAATIEPGEAAVAIDSPFGRLGLSVCYDIRFPELYRSYAPVDVIFAPSAFTVPTGQAHWETLLRARAIESLAYVVAPAQGGTHPSGRRTWGHSMIIDPWGEILASLELGPGVAVADIDAARIASVRASLPALQHRK 267          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A2W4JY53_9PROT (Acyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4JY53_9PROT)

HSP 1 Score: 354 bits (908), Expect = 1.630e-120
Identity = 174/269 (64.68%), Postives = 212/269 (78.81%), Query Frame = 1
Query:   10 KVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNRRIK 816
            KVAAIQMVS P++ AN+ AA RL+ +AA  GA+LVALPEYFC++G  ETDKVK  EAD     G GP+Q FLA+ A RHGIWL+GGT+PI  +DP RVR+AC VYD  GRRVARYDKIHLF ++   E Y E  T++ GD P  V++P+GRL LSVCYD+RFPELYR+ +P+D+  +P+AFTATTG AHWE+L+RARAVENL YV+APAQGG HPNGRRTHGHTMIVDPWG ++A  AEG  V IA+ID +  A VR SLPALD+R ++
Sbjct:    6 KVAAIQMVSEPDIDANLAAAERLIGEAAGAGAQLVALPEYFCLMGA-ETDKVKCCEAD-----GDGPVQRFLAETAARHGIWLIGGTVPIRCADPQRVRNACLVYDPEGRRVARYDKIHLFGYQNERERYREAETIEAGDRPTAVDTPFGRLALSVCYDIRFPELYRALAPVDLIAIPAAFTATTGEAHWEILVRARAVENLAYVLAPAQGGRHPNGRRTHGHTMIVDPWGRILALQAEGPGVAIAEIDPSYQAKVRASLPALDHRVLR 268          
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Match: A0A536TVJ0_9PROT (Carbon-nitrogen hydrolase family protein n=6 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TVJ0_9PROT)

HSP 1 Score: 348 bits (894), Expect = 2.340e-118
Identity = 172/266 (64.66%), Postives = 205/266 (77.07%), Query Frame = 1
Query:   10 KVAAIQMVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSEADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYDDAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSVCYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVVAPAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGVRGSLPALDNR 807
            K A +QMVS P V  N+ AA +LVAQAA Q AKLV LPEYFCILG  +TDKV   E D     G GPIQ FL+  ARRHG+WLVGG++P+   DPG+VR++C VYD  GRRVARYDKIHLF    GAE +DE +T+Q G     +ESP+GR+ LSVCYDVRFPELYR+ +P+D+  VPSAFTATTGRAHWE LLRARA+ENL +V+APAQGG HPNGR+THGH+M+VDPWG+VVAE A G  VV+A+ID A  A +R SLPAL +R
Sbjct:    8 KAAVVQMVSTPRVDENLAAAAKLVAQAAEQRAKLVVLPEYFCILGMRDTDKVAAREED-----GAGPIQEFLSGTARRHGVWLVGGSVPLECDDPGKVRNSCLVYDSDGRRVARYDKIHLFGLELGAERFDEAKTIQAGTQSCAIESPFGRIALSVCYDVRFPELYRALAPLDIILVPSAFTATTGRAHWETLLRARAIENLAWVLAPAQGGKHPNGRQTHGHSMVVDPWGKVVAERAAGPGVVVAEIDPAFQAKMRRSLPALAHR 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5436.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4BIF7_9PROT1.990e-14273.23Acyltransferase n=4 Tax=unclassified Betaproteobac... [more]
A0A1F4FD64_9PROT1.770e-14074.25Acyltransferase n=2 Tax=unclassified Betaproteobac... [more]
A0A1F4AZ95_9PROT6.660e-13470.90Acyltransferase n=1 Tax=Betaproteobacteria bacteri... [more]
A0A1F2UWX2_9BACT2.450e-12969.37Acyltransferase n=1 Tax=Acidobacteria bacterium RI... [more]
A0A1F3YCX2_9PROT5.250e-12667.04Acyltransferase n=1 Tax=Betaproteobacteria bacteri... [more]
A0A1F4F475_9PROT3.570e-12265.67Acyltransferase n=1 Tax=Betaproteobacteria bacteri... [more]
A0A537BLE9_9PROT1.990e-12164.55Carbon-nitrogen hydrolase family protein n=4 Tax=B... [more]
A0A1F4CDR7_9PROT3.350e-12163.67Acyltransferase n=2 Tax=unclassified Betaproteobac... [more]
A0A2W4JY53_9PROT1.630e-12064.68Acyltransferase n=1 Tax=Proteobacteria bacterium T... [more]
A0A536TVJ0_9PROT2.340e-11864.66Carbon-nitrogen hydrolase family protein n=6 Tax=B... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5436contigP-wetherbeei_contig5436:2617..3435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1192124.LIG30_3650
Preferred nameopaA
PFAMsCN_hydrolase
Model size819
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00315,RC00325,RC00617,RC00959,RC02811
KEGG koko:K01501,ko:K11206
KEGG ReactionR00540,R01887,R03093,R03542,R05591,R07855
KEGG Pathwayko00380,ko00460,ko00627,ko00643,ko00910,ko01120,map00380,map00460,map00627,map00643,map00910,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.58e-111
EggNOG OGsCOG0388@1|root,COG0388@2|Bacteria,1MUUB@1224|Proteobacteria,2VIR4@28216|Betaproteobacteria,1K2WY@119060|Burkholderiaceae
EC3.5.5.1
DescriptionPFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
Cds size792
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.270793-UTR-P-wetherbeei_contig5436:2616..26431683186812.270793-UTR-P-wetherbeei_contig5436:2616..2643Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5436 2617..2643 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.2804565-CDS-P-wetherbeei_contig5436:2643..34351683186812.2804565-CDS-P-wetherbeei_contig5436:2643..3435Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5436 2644..3435 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5436.2.1prot_P-wetherbeei_contig5436.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5436 2644..3435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5436.2.1

>prot_P-wetherbeei_contig5436.2.1 ID=prot_P-wetherbeei_contig5436.2.1|Name=mRNA_P-wetherbeei_contig5436.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
MVSAPEVAANIEAAGRLVAQAAAQGAKLVALPEYFCILGRHETDKVKVSE
ADAQDAGGGGPIQAFLADAARRHGIWLVGGTMPIASSDPGRVRSACFVYD
DAGRRVARYDKIHLFSFRQGAEDYDETRTMQPGDTPVTVESPYGRLGLSV
CYDVRFPELYRSESPIDMWFVPSAFTATTGRAHWEVLLRARAVENLCYVV
APAQGGTHPNGRRTHGHTMIVDPWGEVVAEHAEGEAVVIADIDFARIAGV
RGSLPALDNRRIK*
back to top

mRNA from alignment at P-wetherbeei_contig5436:2617..3435+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5436.2.1 ID=mRNA_P-wetherbeei_contig5436.2.1|Name=mRNA_P-wetherbeei_contig5436.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig5436:2617..3435+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCCCGTGAAAGTCGCCGCGATACAGATGGTGTCCGCGCCGGAAGTCGC CGCCAATATCGAGGCGGCCGGGAGGCTGGTCGCACAGGCCGCCGCGCAGG GCGCGAAGCTGGTTGCGTTGCCCGAGTACTTCTGCATCCTCGGCAGGCAC GAGACGGACAAGGTGAAGGTGAGTGAGGCCGATGCGCAGGATGCGGGCGG TGGCGGGCCGATCCAGGCCTTCCTCGCCGACGCGGCCCGCAGGCACGGCA TATGGCTCGTGGGCGGCACGATGCCGATCGCTTCAAGCGACCCGGGGCGT GTGCGCAGCGCCTGCTTCGTGTACGACGACGCCGGCCGGCGAGTCGCGCG CTACGACAAGATCCACCTGTTCTCCTTCCGGCAGGGTGCCGAGGACTACG ACGAGACACGCACCATGCAGCCCGGTGACACGCCGGTAACGGTCGAAAGC CCCTACGGGAGGCTGGGCCTCTCCGTTTGCTATGATGTCCGCTTCCCGGA GTTGTATCGCAGCGAATCGCCGATCGACATGTGGTTCGTCCCTTCGGCAT TCACGGCGACGACGGGACGAGCGCACTGGGAAGTGCTGCTTCGCGCGCGC GCGGTAGAGAACCTGTGCTATGTGGTCGCACCTGCGCAGGGCGGGACCCA TCCCAACGGCCGGCGCACCCATGGCCACACGATGATCGTCGACCCGTGGG GGGAAGTGGTGGCCGAACACGCCGAAGGCGAGGCGGTGGTGATCGCCGAC ATCGACTTTGCACGCATCGCCGGGGTCCGCGGTTCGCTCCCGGCCCTCGA TAACCGCAGGATCAAATGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5436:2617..3435+

>mRNA_P-wetherbeei_contig5436.2.1 ID=mRNA_P-wetherbeei_contig5436.2.1|Name=mRNA_P-wetherbeei_contig5436.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig5436:2617..3435+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGTCCGCGCCGGAAGTCGCCGCCAATATCGAGGCGGCCGGGAGGCT
GGTCGCACAGGCCGCCGCGCAGGGCGCGAAGCTGGTTGCGTTGCCCGAGT
ACTTCTGCATCCTCGGCAGGCACGAGACGGACAAGGTGAAGGTGAGTGAG
GCCGATGCGCAGGATGCGGGCGGTGGCGGGCCGATCCAGGCCTTCCTCGC
CGACGCGGCCCGCAGGCACGGCATATGGCTCGTGGGCGGCACGATGCCGA
TCGCTTCAAGCGACCCGGGGCGTGTGCGCAGCGCCTGCTTCGTGTACGAC
GACGCCGGCCGGCGAGTCGCGCGCTACGACAAGATCCACCTGTTCTCCTT
CCGGCAGGGTGCCGAGGACTACGACGAGACACGCACCATGCAGCCCGGTG
ACACGCCGGTAACGGTCGAAAGCCCCTACGGGAGGCTGGGCCTCTCCGTT
TGCTATGATGTCCGCTTCCCGGAGTTGTATCGCAGCGAATCGCCGATCGA
CATGTGGTTCGTCCCTTCGGCATTCACGGCGACGACGGGACGAGCGCACT
GGGAAGTGCTGCTTCGCGCGCGCGCGGTAGAGAACCTGTGCTATGTGGTC
GCACCTGCGCAGGGCGGGACCCATCCCAACGGCCGGCGCACCCATGGCCA
CACGATGATCGTCGACCCGTGGGGGGAAGTGGTGGCCGAACACGCCGAAG
GCGAGGCGGTGGTGATCGCCGACATCGACTTTGCACGCATCGCCGGGGTC
CGCGGTTCGCTCCCGGCCCTCGATAACCGCAGGATCAAATGA
back to top