mRNA_P-wetherbeei_contig54351.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54351.1.1
Unique NamemRNA_P-wetherbeei_contig54351.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: A0A523K765_9GAMM (ATP-binding cassette domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523K765_9GAMM)

HSP 1 Score: 210 bits (534), Expect = 1.190e-64
Identity = 106/169 (62.72%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVVHD 507
            M+++CG LA S GTV I G  L   P AAK +LGYLPE+PPLYR+  V +YLR CA LHG+   A + A+  A+ RCGLQD G RLI +LSKGYQQRVGIAQAIVH P V++LDEPT GLDP QIR++R+L+RELG D  VI+STHILPEV+A+  R+ ILH+GR+V D
Sbjct:   49 MQMICGVLAPSLGTVRIGGVDLLEDPIAAKRQLGYLPELPPLYREFTVDEYLRYCAHLHGLRKHAATKAMEEAKARCGLQDTGRRLIGNLSKGYQQRVGIAQAIVHSPAVVVLDEPTVGLDPIQIREIRKLMRELGNDHGVILSTHILPEVQAVCDRVQILHEGRLVLD 217          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: A0A7C5TQT5_9GAMM (ATP-binding cassette domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5TQT5_9GAMM)

HSP 1 Score: 209 bits (533), Expect = 1.500e-64
Identity = 107/177 (60.45%), Postives = 135/177 (76.27%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVVHDAAASAVRR 531
            + +L G LA S+G V + GH L   P+AAKA +GYLPE PPLYR++ V +YLR CARL+G+A      AV RA  RCGL+ +  RLI +LSKGYQQRVGIAQAI+H P V+ILDEPT GLDP QIR++REL+RELGRD AVI+STHILPEV+ + +R+ I+H+GR+V  AA  A+ R
Sbjct:   49 LHMLTGNLAPSAGRVTVAGHDLLDEPRAAKAAIGYLPEQPPLYRELTVGEYLRYCARLNGIARGRAGEAVRRAMARCGLEGMERRLIGNLSKGYQQRVGIAQAIIHTPPVVILDEPTVGLDPIQIREIRELVRELGRDHAVILSTHILPEVQMVCSRVEIIHRGRIVWSAAMDALER 225          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: UPI0019CB6E5F (ATP-binding cassette domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019CB6E5F)

HSP 1 Score: 207 bits (527), Expect = 1.050e-63
Identity = 105/167 (62.87%), Postives = 130/167 (77.84%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVV 501
            M++L G LA S+G+V I G  L   P AAK +LGYLPE PPLYRD+ V ++L+  ARLH VA   +  AV RA+QRCGL +VG R+I+ LSKGYQQR+GIAQAIVHEP V+ILDEPT GLDP QIR++RELIRELGR+ +VI+STHILPEV A+  R+ I+H+G  V
Sbjct:   50 MRMLTGNLAPSAGSVRICGIDLTTRPVAAKMKLGYLPETPPLYRDLTVDEFLQLAARLHRVAATRVGQAVDRAKQRCGLSEVGRRIIATLSKGYQQRIGIAQAIVHEPPVVILDEPTVGLDPNQIREIRELIRELGREASVILSTHILPEVEAVCDRVQIMHRGHAV 216          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: UPI001905691F (ABC transporter ATP-binding protein n=1 Tax=Halorhodospira neutriphila TaxID=168379 RepID=UPI001905691F)

HSP 1 Score: 207 bits (526), Expect = 1.440e-63
Identity = 104/167 (62.28%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVV 501
            M+I+ G LA ++G+V I G  L A P +AKA LG+LPE PPLYR++ V DYLR CARL+GV    L+ AV  ARQRCGL+ +G RLI +LS+G+QQRVGIAQAIVH P+V++LDEPT GLDP Q+R++RELIRELGR   VI+STHILPEV+A+  R+ I+H+GR+V
Sbjct:   49 MRIITGNLAPTAGSVRINGVDLLADPLSAKARLGFLPEDPPLYRELTVNDYLRYCARLNGVRGSRLAEAVREARQRCGLKQMGERLIGNLSRGFQQRVGIAQAIVHRPEVVVLDEPTIGLDPIQVREIRELIRELGRQHGVILSTHILPEVQAVCNRVQIIHEGRLV 215          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: A0A6F8VFC5_9PROT (ABC transporter domain-containing protein n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VFC5_9PROT)

HSP 1 Score: 205 bits (521), Expect = 1.540e-63
Identity = 110/177 (62.15%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVVHDAAASAVRR 531
            M+IL G LA SSG+V+I G  L+  P+AAKA LGYLPE+PPLYR++ V+++LR  AR H V    L AAV+RA Q CGL +V  RLI  LSKGY+QRVGIAQAIVH P V+ILDEPTAGLDP QIR++RELI  LGR  +VI+STHIL E  AL  R++ILHQGRVV     + +RR
Sbjct:   53 MQILSGNLAPSSGSVEICGVDLSEQPEAAKANLGYLPEIPPLYRELTVREFLRLAARQHRVPKAELDAAVSRALQCCGLDEVAKRLIGGLSKGYRQRVGIAQAIVHNPSVIILDEPTAGLDPLQIREIRELIATLGRTHSVILSTHILAEAEALCDRVLILHQGRVVFSGDMAELRR 229          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: Q602I5_METCA (ABC transporter, ATP-binding family protein n=6 Tax=Methylococcus TaxID=413 RepID=Q602I5_METCA)

HSP 1 Score: 206 bits (523), Expect = 4.450e-63
Identity = 102/167 (61.08%), Postives = 130/167 (77.84%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVV 501
            M+++CG LA +SG + I G  +   P+ AK ELGYLPE+PP+YRD+ V +YL  CARLHG+  D    AV  A++RCGL +VG RLI++LSKGYQQRVGIAQAIVH P V++LDEPT GLDP QIR++RELIRELGR+  VI+STHILPEV+   T + I+H+GR+V
Sbjct:   47 MQMICGNLAPTSGQILINGIDILDQPREAKRELGYLPEIPPVYRDLTVDEYLEFCARLHGIHRDRSRRAVDTAKERCGLTEVGPRLINNLSKGYQQRVGIAQAIVHMPAVIVLDEPTVGLDPIQIREIRELIRELGREHGVILSTHILPEVQESCTHVQIIHKGRLV 213          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: A0A4R3XY44_9PROT (ABC-2 type transport system ATP-binding protein n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3XY44_9PROT)

HSP 1 Score: 206 bits (523), Expect = 5.440e-63
Identity = 103/177 (58.19%), Postives = 135/177 (76.27%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVVHDAAASAVRR 531
            M++L G LA S G++ I G  L   P+AAKA++GYLPE+PPLY+++ V +YLR   RLH +   AL  A+ RA+QRCGL DVG RLI +LSKGYQQRVGIAQAIVH P V+ILDEPT GLDP Q+R++R LIRELG + +VI+STHILPEV ++  R+ I+HQG++V   +  A++R
Sbjct:   52 MRMLTGNLAPSDGSIQICGIDLLENPKAAKAKIGYLPEIPPLYKELTVDEYLRFVGRLHQMTKSALPTAIERAKQRCGLVDVGNRLIGNLSKGYQQRVGIAQAIVHNPDVVILDEPTVGLDPIQVREIRTLIRELGGEHSVIISTHILPEVESVCDRVQIMHQGQLVFSDSIEALKR 228          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: S6AJC4_SULDS (ABC transporter related n=4 Tax=Proteobacteria TaxID=1224 RepID=S6AJC4_SULDS)

HSP 1 Score: 202 bits (515), Expect = 9.470e-63
Identity = 102/167 (61.08%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVV 501
            +++L G LA S+G+V+I G +L   P+ AKA LGYLPE PPLYR++ V +YLR  +RLH +  + ++ AV +ARQRCGL +VG RLI +LSKGYQQRVGIAQAIVH P+V+ILDEPT GLDP QIR++R LIRELG + +VI+STHILPEV ++  RI I+HQG++V
Sbjct:   48 LQMLAGCLAPSTGSVEICGINLLENPREAKALLGYLPETPPLYRELAVDEYLRLASRLHRIPKNEIADAVDKARQRCGLTEVGKRLIGNLSKGYQQRVGIAQAIVHNPRVVILDEPTVGLDPIQIREIRSLIRELGGEHSVILSTHILPEVESVCDRIQIMHQGKLV 214          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: A0A1F3WZR5_9PROT (ABC transporter ATP-binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3WZR5_9PROT)

HSP 1 Score: 204 bits (520), Expect = 1.230e-62
Identity = 103/177 (58.19%), Postives = 132/177 (74.58%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRVVHDAAASAVRR 531
            M++L G LA SSG+V I G  L   P+ AKA++GYLPE PPLYR++ V ++L  C RLH V  D L  AV + + RCGL D+G RLI+HLSKGYQQRVGIAQAI+H+P V+ILDEPT GLDP QIR++R LIRELG   +VI+STHILPEV A+  R+ I+H+G++V   +   +RR
Sbjct:   51 MQMLTGNLAPSSGSVSICGIDLLEKPRLAKAKIGYLPETPPLYRELTVDEFLTFCGRLHRVPRDELPQAVKQTKARCGLSDMGRRLIAHLSKGYQQRVGIAQAILHQPDVVILDEPTVGLDPNQIREIRALIRELGGSHSVILSTHILPEVEAICDRVQIMHRGKIVFADSIDGLRR 227          
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Match: A0A148NAL4_9GAMM (ABC transporter ATP-binding protein n=1 Tax=Methylothermaceae bacteria B42 TaxID=1798802 RepID=A0A148NAL4_9GAMM)

HSP 1 Score: 204 bits (520), Expect = 1.260e-62
Identity = 99/166 (59.64%), Postives = 131/166 (78.92%), Query Frame = 1
Query:    1 MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKDYLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGIAQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPEVRALATRIMILHQGRV 498
            M++LCG LA S+G + I G  L   P+ AK  LGYLPE+PPLYR++ V +YL  C RLHG+   +L+ A   A++RCGL D   +LI +LSKGYQQRVGIAQAI+H P+V++LDEPT GLDP QIR++RELIRELG++ AV++S+HILPEV+AL +R+MI+HQG+V
Sbjct:   45 MQMLCGTLAPSAGQIRINGIDLLEKPKQAKRYLGYLPEIPPLYRELTVNEYLDYCGRLHGLKGPSLTQARESAKERCGLTDASTQLIGNLSKGYQQRVGIAQAILHSPEVVVLDEPTVGLDPNQIREIRELIRELGQEHAVLLSSHILPEVQALCSRVMIIHQGKV 210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523K765_9GAMM1.190e-6462.72ATP-binding cassette domain-containing protein n=1... [more]
A0A7C5TQT5_9GAMM1.500e-6460.45ATP-binding cassette domain-containing protein n=1... [more]
UPI0019CB6E5F1.050e-6362.87ATP-binding cassette domain-containing protein n=1... [more]
UPI001905691F1.440e-6362.28ABC transporter ATP-binding protein n=1 Tax=Halorh... [more]
A0A6F8VFC5_9PROT1.540e-6362.15ABC transporter domain-containing protein n=1 Tax=... [more]
Q602I5_METCA4.450e-6361.08ABC transporter, ATP-binding family protein n=6 Ta... [more]
A0A4R3XY44_9PROT5.440e-6358.19ABC-2 type transport system ATP-binding protein n=... [more]
S6AJC4_SULDS9.470e-6361.08ABC transporter related n=4 Tax=Proteobacteria Tax... [more]
A0A1F3WZR5_9PROT1.230e-6258.19ABC transporter ATP-binding protein n=2 Tax=unclas... [more]
A0A148NAL4_9GAMM1.260e-6259.64ABC transporter ATP-binding protein n=1 Tax=Methyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54351contigP-wetherbeei_contig54351:1..531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog243233.MCA3078
PFAMsABC_tran
Model size531
Max annot lvl135618|Methylococcales
KEGG koko:K01990
KEGG TC3.A.1
KEGG ModuleM00254
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.3e-64
EggNOG OGsCOG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,1T1HN@1236|Gammaproteobacteria,1XDWI@135618|Methylococcales
Descriptionpfam abc
Cds size531
COG categoryV
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186812.1025088-CDS-P-wetherbeei_contig54351:0..5311683186812.1025088-CDS-P-wetherbeei_contig54351:0..531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54351 1..531 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54351.1.1prot_P-wetherbeei_contig54351.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54351 1..531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54351.1.1

>prot_P-wetherbeei_contig54351.1.1 ID=prot_P-wetherbeei_contig54351.1.1|Name=mRNA_P-wetherbeei_contig54351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
MKILCGALAASSGTVDIVGHSLAAAPQAAKAELGYLPEVPPLYRDMLVKD
YLRACARLHGVATDALSAAVARARQRCGLQDVGARLISHLSKGYQQRVGI
AQAIVHEPQVLILDEPTAGLDPGQIRDVRELIRELGRDRAVIVSTHILPE
VRALATRIMILHQGRVVHDAAASAVRR
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mRNA from alignment at P-wetherbeei_contig54351:1..531+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54351.1.1 ID=mRNA_P-wetherbeei_contig54351.1.1|Name=mRNA_P-wetherbeei_contig54351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54351:1..531+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCCTGTGCGGCGCCCTCGCGGCGAGCAGTGGCACGGTCGACAT CGTCGGCCACTCGCTGGCCGCTGCGCCGCAGGCGGCCAAGGCCGAGCTCG GCTACCTGCCCGAGGTCCCACCGCTGTATCGTGACATGCTGGTCAAGGAT TACCTGCGCGCCTGCGCGCGCCTGCATGGCGTGGCGACGGACGCCTTAAG CGCAGCGGTGGCGCGGGCCCGCCAGCGCTGCGGCTTGCAGGACGTCGGTG CGCGCCTGATCAGTCATCTTTCCAAGGGCTATCAGCAGCGCGTCGGCATT GCGCAGGCCATCGTGCATGAGCCGCAGGTCTTGATCCTCGACGAACCGAC CGCCGGCCTCGACCCGGGGCAGATCCGCGATGTGCGCGAATTGATCCGCG AGCTCGGCCGCGATCGGGCGGTCATCGTCTCGACCCACATCCTGCCCGAA GTGCGTGCGCTGGCGACGCGCATCATGATCCTGCATCAGGGGCGGGTGGT GCATGACGCAGCAGCGTCGGCGGTGCGCCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54351:1..531+

>mRNA_P-wetherbeei_contig54351.1.1 ID=mRNA_P-wetherbeei_contig54351.1.1|Name=mRNA_P-wetherbeei_contig54351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54351:1..531+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCCTGTGCGGCGCCCTCGCGGCGAGCAGTGGCACGGTCGACAT
CGTCGGCCACTCGCTGGCCGCTGCGCCGCAGGCGGCCAAGGCCGAGCTCG
GCTACCTGCCCGAGGTCCCACCGCTGTATCGTGACATGCTGGTCAAGGAT
TACCTGCGCGCCTGCGCGCGCCTGCATGGCGTGGCGACGGACGCCTTAAG
CGCAGCGGTGGCGCGGGCCCGCCAGCGCTGCGGCTTGCAGGACGTCGGTG
CGCGCCTGATCAGTCATCTTTCCAAGGGCTATCAGCAGCGCGTCGGCATT
GCGCAGGCCATCGTGCATGAGCCGCAGGTCTTGATCCTCGACGAACCGAC
CGCCGGCCTCGACCCGGGGCAGATCCGCGATGTGCGCGAATTGATCCGCG
AGCTCGGCCGCGATCGGGCGGTCATCGTCTCGACCCACATCCTGCCCGAA
GTGCGTGCGCTGGCGACGCGCATCATGATCCTGCATCAGGGGCGGGTGGT
GCATGACGCAGCAGCGTCGGCGGTGCGCCGC
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