mRNA_P-wetherbeei_contig5430.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5430.5.1
Unique NamemRNA_P-wetherbeei_contig5430.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A3C0TVC6_9PROT (Carnitine dehydratase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVC6_9PROT)

HSP 1 Score: 620 bits (1598), Expect = 6.140e-222
Identity = 297/361 (82.27%), Postives = 325/361 (90.03%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQKEKAVA 1083
            VIKVEPPIGDLLRMT PRRKGRSTYFGQLNAGKKS+CLDLKDPRAVEL+L+LA KSDVA+QNFRPGVMRGFGLGY HMKARNPKIIYCNMSGFGQEGP+ DWAAFAPIIHA+AGLDMAMM+WQ+D  KP+NGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEA     G+RL+YRA++AKDG+FVVNPLSPNN+ADL +SCGHPEW  KYPL   ERQQNWIN+LN VEEWAKDRT  E E II  GGCPVG+LRRVE+AL +PQ+  R+SAVEIEDGAGSF VANTPLR+CDSESRIREHVPFLGENNAEIL  +LGL Q +   L+EEGV+QKE+A A
Sbjct:   40 VIKVEPPIGDLLRMTFPRRKGRSTYFGQLNAGKKSICLDLKDPRAVELVLKLAEKSDVAVQNFRPGVMRGFGLGYEHMKARNPKIIYCNMSGFGQEGPSKDWAAFAPIIHAAAGLDMAMMSWQQDNTKPLNGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEAKMGAAGSRLLYRAIRAKDGLFVVNPLSPNNFADLCKSCGHPEWLEKYPLMTPERQQNWINLLNAVEEWAKDRTAAECEEIISAGGCPVGRLRRVEEALDEPQAQFRQSAVEIEDGAGSFTVANTPLRLCDSESRIREHVPFLGENNAEILCDVLGLKQGELTALIEEGVVQKERAAA 400          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A353LNP0_9PROT (Carnitine dehydratase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LNP0_9PROT)

HSP 1 Score: 454 bits (1169), Expect = 2.110e-156
Identity = 221/356 (62.08%), Postives = 270/356 (75.84%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQK 1068
            VIK+EPP+GDLLR   PRR+G++ YFGQLNAGK+S+C+DLK P  VEL+LQL  K+DVA+QNFRPGV+RGFGLG+  MKARNPKI+YCNMSG+GQ+GPAA ++A+APIIHASAGLD+ M++ Q+    P+NGSVPFADYMTGVHG  AI+AALFRRERTG+GEEIDIAM +VI+N    ELQE+  +    R  YRAL+AK+G FVVNPLSP N+ DL  + GHPEW  KYPL   ER +NW  ++N +EEWA  RT  E E IIREGGCPV +   V +ALQ  QS  RKS VEI+DGAG F V NTPLRM +SE+RI+  VP LG +N  +L+  L L      +L  EGV+ K
Sbjct:   60 VIKIEPPVGDLLRGASPRRQGKTPYFGQLNAGKQSICVDLKKPEGVELVLQLVEKADVAVQNFRPGVLRGFGLGFDAMKARNPKIVYCNMSGYGQDGPAAGYSAYAPIIHASAGLDLTMISHQDGMELPLNGSVPFADYMTGVHGTTAILAALFRRERTGRGEEIDIAMADVIFNIQAYELQESQHDKPVPRQKYRALRAKEGFFVVNPLSPKNFLDLVNAVGHPEWLEKYPLNTPERVENWGKLMNALEEWASSRTATECEQIIREGGCPVAKFNTVLEALQSEQSQYRKSGVEIDDGAGPFLVPNTPLRMNESEARIKSTVPALGADNHALLTSWLELSDGRISELEAEGVLCK 415          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A2A5AKK4_9GAMM (Carnitine dehydratase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2A5AKK4_9GAMM)

HSP 1 Score: 422 bits (1086), Expect = 4.180e-144
Identity = 206/359 (57.38%), Postives = 266/359 (74.09%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQKEKA 1077
            V+K+E PIGDLLR+  PRRKG++ YF QLNAGK S+ +DLK P A+EL+L LA K+DVAIQNFRPGV+  FGLGY  +KAR P IIYCN+SG+ Q+GPA +++A+API+HASAGLD+ M++ Q+D   P+NGS+PFADY+TGVHG++AI+AALFRRERTG GEEIDIAMTEV++N    ELQE       +R++YRAL+AKDG FVV PLS  N+ DL +S GHPEW  K+PL+  +   NW  +++ +EEWA DRT DE E  IREGGCPV +   V +ALQ  QSV R S +E++DGAG F V NTPLRM  S++ ++  V  LG++N  IL   L +     D+L  +GV+ K KA
Sbjct:   40 VVKIEAPIGDLLRIASPRRKGKTPYFAQLNAGKDSISIDLKKPGAIELVLDLAEKADVAIQNFRPGVLADFGLGYDALKARKPDIIYCNLSGYXQDGPAKNYSAYAPIVHASAGLDLTMISHQDDVEVPLNGSIPFADYLTGVHGSSAIMAALFRRERTGLGEEIDIAMTEVMFNVQAFELQEYQHPEPVSRILYRALQAKDGCFVVTPLSAKNFRDLIKSVGHPEWADKFPLRGPDFAINWRKLMDALEEWAIDRTADECEQTIREGGCPVAKYCTVLEALQSEQSVYRNSVIEMDDGAGKFLVPNTPLRMKHSDASLKPTVAALGQDNEAILKTWLDMSSEKIDQLTAQGVLYKPKA 398          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A2A4USZ0_9GAMM (Carnitine dehydratase n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=A0A2A4USZ0_9GAMM)

HSP 1 Score: 409 bits (1050), Expect = 1.210e-138
Identity = 201/358 (56.15%), Postives = 257/358 (71.79%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQKEK 1074
            V+K+E PIGDLLR+  PRRKG++ YF QLNAGK SV +DLK P A++L+L LA K+DVAIQNFRPGV+  +GLGY  +K R P IIYCN+SG+GQEGP  + +A+API+HASAGLD+ M++ QE  + P+NGS+PFADY+TGVHG  AI+AALFRRERTG+GEEIDIAM +VI+N    ELQE        RL+YRAL AKDG FVV PLS  N+ DL +S GHPEW  + PL+  +   NW  +++ +EEWA DRT  E E II  GGCPV + + V +ALQ  QS+ R S VE+ DG GSF V NTPLRM  +++ I+  V  LG++N  IL   L +   + D L ++GV+ K K
Sbjct:   40 VVKIEAPIGDLLRIASPRRKGKTPYFAQLNAGKDSVSIDLKKPGAIDLVLDLAEKADVAIQNFRPGVLSDYGLGYEDLKVRKPDIIYCNLSGYGQEGPGKNHSAYAPIVHASAGLDLTMISHQEGVDIPLNGSIPFADYLTGVHGATAIMAALFRRERTGQGEEIDIAMADVIFNVQAFELQEHQHPLPVDRLIYRALSAKDGYFVVTPLSEKNFKDLIKSVGHPEWAEEIPLRGPDFASNWRKLMDALEEWAVDRTAAECEKIISAGGCPVAKYQTVLEALQSEQSLHRGSCVEMNDGCGSFLVPNTPLRMKQADASIKSKVSTLGQDNESILQAWLDMSANEIDSLTQQGVLFKPK 397          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A351T3H1_9PROT (Carnitine dehydratase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T3H1_9PROT)

HSP 1 Score: 399 bits (1026), Expect = 4.140e-135
Identity = 190/354 (53.67%), Postives = 254/354 (71.75%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVI 1062
            V+KVEPP GDLLR   PRR G+S YFGQ+N GKKS+ +DLKDPRA +L+LQL  K+DV IQNFRPGVMR FGLGY  +K R P +IYC++SG+GQ GPA+  AA+APIIHA++G D+A+M++Q+  ++P+NG+   ADY+       AI AAL +RERTGKG+EIDIAMTEV+ N L  E+ E  F     R  Y  ++ KDG  +VNP+SP N++DL+ + GHPEW  ++PL   +R +NW  ++ E+E+W ++RT +E E IIREGGCP  + R V D++  PQ   R+  VEI DGAGS+ +  TPLR+  SE+R +  VP LG NNAEIL   LG+ Q+D D+L E+GV+
Sbjct:   36 VVKVEPPSGDLLRGAPPRRDGKSPYFGQINCGKKSISVDLKDPRARDLVLQLVDKTDVVIQNFRPGVMRNFGLGYDDLKQRKPDLIYCSISGYGQHGPASGRAAYAPIIHAASGYDLAVMSYQDHLDRPLNGANATADYLAASLAMGAISAALLKRERTGKGDEIDIAMTEVMQNILAYEIHELQFKAERQRPNYGPVRTKDGFIIVNPISPKNFSDLANAVGHPEWLEQFPLNTKDRLKNWSLLMAELEKWTRERTAEECEEIIREGGCPCSRYRDVWDSMHDPQVDAREGVVEINDGAGSYLIPTTPLRLMQSEARPKPFVPELGGNNAEILQSWLGMDQSDIDRLAEQGVL 389          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A1Y0BDX3_9BACT (D522 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BDX3_9BACT)

HSP 1 Score: 385 bits (989), Expect = 1.330e-129
Identity = 187/354 (52.82%), Postives = 252/354 (71.19%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVI 1062
            V+KVE P GD++R  +PRRKGRS YFGQ+N GKKS+CLDLKDPRA +L+L+L  K+DV +QNFRPGVM+   LGY  ++AR P +IYC++SG+GQEGP A  AAFAPIIHA++G D+A++++Q+  ++P+ G+   AD++       A+ AAL +RERTGKG+EIDI+MTE + N +  E+QE  FN    R  YR  +AKDG F+V PL+ NN+ DL+ +CGHPEW  K+PL   +R +NW  +L EVE WA DR V EVENIIREGGCP  +   V DA+  PQS  R+S VE+ED AG F +  +PLR+ +S S+   +V  LGE+NAE+L   LGL   +  +L + GV+
Sbjct:   29 VVKVEAPGGDMMRAAVPRRKGRSPYFGQINCGKKSLCLDLKDPRAHDLVLKLCEKTDVVLQNFRPGVMKRLKLGYDDLRARKPDLIYCSISGYGQEGPYAHLAAFAPIIHATSGYDLAILSFQKGLDRPLTGANATADFLAASFAMGAVSAALLKRERTGKGDEIDISMTEAMQNIMPYEIQELQFNAERLRPDYRPARAKDGFFLVTPLTGNNFRDLANACGHPEWLQKFPLTGPDRVKNWEMLLCEVEAWAADRPVREVENIIREGGCPCARYDNVWDAMHGPQSEFRQSTVEVEDAAGPFLIPASPLRLNNSHSQPGNYVADLGEHNAEVLQSWLGLSADETTQLAQSGVL 382          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A2A4US54_9GAMM (Carnitine dehydratase n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=A0A2A4US54_9GAMM)

HSP 1 Score: 375 bits (964), Expect = 1.060e-125
Identity = 180/358 (50.28%), Postives = 250/358 (69.83%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQKEK 1074
            V+KVEPP+GDLLR   PR  G+S YFGQ+N GKKS+ +DLK P+AVELILQL  K+DV +QN+RPGVM GFGL Y  ++     IIYC++SG+GQ GP++   AFAPIIHA++G D+A++++Q+D +KP+NG+   ADY+       AI AAL +RE+TG+G+EIDIAMTEVI N L  E+QE  F     R  Y  ++ KDG  +VNP+SPNN+ DL+ + GHPEW  ++PL   +R +NW  +++ +E+W    +  E E IIR+GGCPV + R V D++  PQ   R+  VEI DGAGSF + NTP+R+ +SE+R +  VP LG +NA++L   LGL Q +  +L + GV+ + K
Sbjct:   36 VVKVEPPVGDLLRGAPPRHGGKSPYFGQINCGKKSIAVDLKKPQAVELILQLVKKTDVVMQNYRPGVMAGFGLAYDDLRKHKEDIIYCSISGYGQHGPSSHRPAFAPIIHAASGYDLAILSYQDDLDKPLNGANATADYLAASLAMGAISAALLKREKTGQGDEIDIAMTEVIQNILAYEIQELQFKAERQRPNYGPVQTKDGYIIVNPISPNNFKDLAHAVGHPEWLDEFPLNTRDRLKNWTKLMSALEQWTLQYSSMEAEKIIRDGGCPVSRYRDVWDSMHDPQVDAREGVVEINDGAGSFLIPNTPVRLMNSEARPKPFVPTLGGDNADVLQRWLGLNQTELTELSKSGVLFEGK 393          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A2A5ALN5_9GAMM (Carnitine dehydratase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2A5ALN5_9GAMM)

HSP 1 Score: 371 bits (952), Expect = 8.250e-124
Identity = 177/354 (50.00%), Postives = 245/354 (69.21%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVI 1062
            V+KVEPPIGDLLR   PRR GRS YFGQ+N GKKS+ +DLK P++  LIL L  KSDV +QNFRPGVM G GL Y+ ++     +IYC++SG+GQEGP++   AFAPIIHA++G D+A+M++Q++ +KP+NG+   ADY+       AI AAL +RE+TG+G+EIDIAMTEVI N L  E+QE  F     R  Y  ++ KDG  +VNP+SPNN+ DL+ + GHPEW  ++PL   +R +NW  ++NE+E+W    T  E E II++GGCP  + R V D++   Q   R+  VEI+DGAG + + NTP+R+ +SE+  +  VP LG +NA +L   LGL +A+  +L E GV+
Sbjct:   36 VVKVEPPIGDLLRGAPPRRGGRSPYFGQINCGKKSISVDLKHPKSKSLILSLVKKSDVVVQNFRPGVMAGLGLAYSDLRKHKADLIYCSISGYGQEGPSSHRPAFAPIIHAASGYDLAIMSYQDNLDKPLNGANATADYLAASLAMGAISAALLKREKTGQGDEIDIAMTEVIQNILAYEIQELQFKAERQRPNYGPVRTKDGYIIVNPISPNNFKDLALAVGHPEWLDEFPLNTTDRLKNWTRLMNELEKWTVQHTSLEAEKIIQDGGCPCSRYRDVWDSMHDAQVEARRGVVEIDDGAGPYLIPNTPVRLMNSEAEPKRFVPALGADNAAVLQQWLGLDEAEIKQLSESGVL 389          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A2A4LQ92_9GAMM (Carnitine dehydratase n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A4LQ92_9GAMM)

HSP 1 Score: 357 bits (916), Expect = 2.390e-118
Identity = 179/359 (49.86%), Postives = 240/359 (66.85%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQV-AERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQKEK 1074
            V+KVEPP GDLLR   P R+G S Y+GQ N GKKS+ +DLK    + LILQL  ++DV +QNFRPGVMRG GLGY  +      IIY ++SG+GQ GPA+ WAA+APIIHAS+G D+A++++Q+D +KP+NG+   ADY+       AI AAL +RE+TG GEEIDI+M E++ N L  E+ E  F     R  Y  ++  DG  +VNPLSP N+ DL +S GHPEW  +YPL+  ++RQ+NW  ++ E+E+WA  RT  E E+IIREGGCP  + R V +++Q PQS  R+  VEI D AG++ +  TPLR+ +SE+  +  V  LGE+NAEIL   LG  Q   D LV   V+   K
Sbjct:   36 VVKVEPPTGDLLRGAPPLREGVSPYYGQTNCGKKSISVDLKTREGIALILQLVEQTDVVVQNFRPGVMRGMGLGYEDLVKHKSDIIYASISGYGQHGPASQWAAYAPIIHASSGYDLAILSYQDDLDKPLNGANATADYLAASLVMGAISAALLKREKTGAGEEIDISMMEIMQNVLPYEIHEQQFKAKRQRPNYGPVRTXDGYIMVNPLSPKNFRDLVKSVGHPEWLEQYPLKTPSDRQKNWSLIMAELEKWALKRTAVECESIIREGGCPCSRYREVWESMQDPQSEYRQGVVEIRDSAGAYMIPTTPLRLMNSEAAPKPFVSDLGEDNAEILQDWLGFEQGRVDDLVATKVLFSRK 394          
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Match: A0A3B9BJA0_9PROT (Carnitine dehydratase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BJA0_9PROT)

HSP 1 Score: 330 bits (847), Expect = 5.860e-108
Identity = 163/357 (45.66%), Postives = 229/357 (64.15%), Query Frame = 1
Query:    1 VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELILQLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAADWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIVAALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKAKDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVEEWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGAGSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVEEGVIQKE 1071
            +IKVEPP GD +R  +PRR G+ TYF Q+NAGKKSV +DL  P  ++L  +L   SDV I+N+RPGVM+ +GL Y  ++ R P IIYC++SG+GQEGPA+  +A+APIIHA++G +++  +++    KP+  +   AD+M   H   AI AALFRRERTG+GE +DIAM +V+++ L  E QEA F     R  +  +  KDG  +V PLS  NY DL  + GHPEW  KYPL      + W  ++  +EEWA D T  E E II  GGCPV +   +E+++ QPQ   R + VE+ D  G F+V NTP+R  +SESR+R  +  +G++N EIL  +L L   + D L  + V+ K+
Sbjct:   40 IIKVEPPSGDYMRSGVPRRGGKGTYFAQVNAGKKSVAIDLTKPEGIDLFFRLLDISDVVIENYRPGVMQRYGLDYATLRNRKPDIIYCSVSGYGQEGPASGLSAYAPIIHAASGWELSKKSYEPALEKPMRNNDATADFMGATHAMGAICAALFRRERTGEGERLDIAMMDVMHSVLAFEYQEAQFPPKRGRPSFIPVATKDGFILVVPLSLKNYDDLLAAIGHPEWKEKYPLNTQGHFKAWEGLMAGLEEWAADYTAIEAEAIISAGGCPVTRFLTMEESMNQPQVAYRGAQVEMRDDVGPFKVPNTPMRTTNSESRLRPEIAEIGQHNEEILRDMLKLADTEIDALYAQKVLHKK 396          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5430.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TVC6_9PROT6.140e-22282.27Carnitine dehydratase n=1 Tax=Alphaproteobacteria ... [more]
A0A353LNP0_9PROT2.110e-15662.08Carnitine dehydratase n=2 Tax=Alphaproteobacteria ... [more]
A0A2A5AKK4_9GAMM4.180e-14457.38Carnitine dehydratase n=1 Tax=Gammaproteobacteria ... [more]
A0A2A4USZ0_9GAMM1.210e-13856.15Carnitine dehydratase n=1 Tax=Moraxellaceae bacter... [more]
A0A351T3H1_9PROT4.140e-13553.67Carnitine dehydratase n=6 Tax=Alphaproteobacteria ... [more]
A0A1Y0BDX3_9BACT1.330e-12952.82D522 n=1 Tax=uncultured bacterium TaxID=77133 RepI... [more]
A0A2A4US54_9GAMM1.060e-12550.28Carnitine dehydratase n=1 Tax=Moraxellaceae bacter... [more]
A0A2A5ALN5_9GAMM8.250e-12450.00Carnitine dehydratase n=1 Tax=Gammaproteobacteria ... [more]
A0A2A4LQ92_9GAMM2.390e-11849.86Carnitine dehydratase n=1 Tax=Cellvibrionales bact... [more]
A0A3B9BJA0_9PROT5.860e-10845.66Carnitine dehydratase n=6 Tax=Alphaproteobacteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5430contigP-wetherbeei_contig5430:2771..3856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1331060.RLDS_25375
PFAMsCoA_transf_3
Model size1086
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.2e-96
EggNOG OGsCOG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TRB6@28211|Alphaproteobacteria
DescriptionL-carnitine dehydratase bile acid-inducible protein F
Cds size1086
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186811.7514033-CDS-P-wetherbeei_contig5430:2770..38561683186811.7514033-CDS-P-wetherbeei_contig5430:2770..3856Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5430 2771..3856 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5430.5.1prot_P-wetherbeei_contig5430.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5430 2771..3856 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5430.5.1

>prot_P-wetherbeei_contig5430.5.1 ID=prot_P-wetherbeei_contig5430.5.1|Name=mRNA_P-wetherbeei_contig5430.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp
VIKVEPPIGDLLRMTMPRRKGRSTYFGQLNAGKKSVCLDLKDPRAVELIL
QLAAKSDVAIQNFRPGVMRGFGLGYTHMKARNPKIIYCNMSGFGQEGPAA
DWAAFAPIIHASAGLDMAMMTWQEDKNKPINGSVPFADYMTGVHGNAAIV
AALFRRERTGKGEEIDIAMTEVIYNALTNELQEANFNTTGARLVYRALKA
KDGMFVVNPLSPNNYADLSRSCGHPEWPVKYPLQVAERQQNWINMLNEVE
EWAKDRTVDEVENIIREGGCPVGQLRRVEDALQQPQSVLRKSAVEIEDGA
GSFRVANTPLRMCDSESRIREHVPFLGENNAEILSGLLGLPQADFDKLVE
EGVIQKEKAVA*
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mRNA from alignment at P-wetherbeei_contig5430:2771..3856-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5430.5.1 ID=mRNA_P-wetherbeei_contig5430.5.1|Name=mRNA_P-wetherbeei_contig5430.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig5430:2771..3856- (Phaeothamnion wetherbeei SAG_119_79)
GTCATCAAGGTGGAACCCCCCATCGGCGATCTGCTGCGCATGACCATGCC GCGCCGCAAGGGCCGCAGCACCTATTTCGGACAGTTGAACGCCGGCAAGA AAAGCGTCTGCCTGGACCTGAAAGACCCGCGCGCTGTCGAATTGATCTTG CAGCTTGCCGCAAAAAGCGATGTCGCCATCCAGAATTTCCGCCCCGGCGT GATGCGCGGTTTCGGCCTTGGCTATACGCATATGAAGGCGCGCAACCCGA AAATCATCTATTGCAACATGTCCGGCTTTGGCCAGGAAGGCCCCGCCGCC GACTGGGCGGCGTTTGCCCCCATCATTCACGCCTCCGCCGGGCTGGATAT GGCCATGATGACCTGGCAGGAAGACAAGAACAAGCCCATCAATGGCTCGG TCCCGTTCGCCGACTATATGACCGGCGTACATGGCAATGCCGCAATTGTG GCGGCCCTGTTCCGGCGCGAACGCACCGGCAAGGGCGAGGAAATCGACAT CGCCATGACCGAGGTGATTTACAACGCACTGACCAATGAATTGCAGGAAG CAAACTTTAACACGACCGGCGCACGGCTGGTTTACCGCGCACTAAAGGCG AAAGACGGCATGTTTGTCGTCAATCCGCTGTCGCCGAATAATTATGCCGA CCTCAGCAGATCCTGCGGCCACCCGGAATGGCCGGTGAAATATCCGCTGC AGGTTGCCGAGCGCCAGCAGAACTGGATAAATATGCTGAACGAGGTTGAA GAGTGGGCCAAAGACCGCACCGTTGACGAGGTGGAAAACATCATCCGTGA AGGCGGTTGCCCGGTCGGGCAGTTGCGCCGTGTTGAAGACGCCCTGCAAC AACCGCAATCCGTGCTGCGTAAAAGCGCCGTGGAAATCGAGGATGGCGCG GGTTCATTCCGGGTCGCGAATACGCCGCTGCGCATGTGCGATTCCGAATC GCGGATACGCGAGCATGTGCCGTTCCTGGGCGAGAACAATGCGGAAATCC TGAGCGGCCTGTTAGGCCTGCCGCAGGCGGATTTCGACAAACTGGTGGAA GAAGGCGTGATACAAAAAGAAAAGGCTGTTGCATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5430:2771..3856-

>mRNA_P-wetherbeei_contig5430.5.1 ID=mRNA_P-wetherbeei_contig5430.5.1|Name=mRNA_P-wetherbeei_contig5430.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig5430:2771..3856- (Phaeothamnion wetherbeei SAG_119_79)
GTCATCAAGGTGGAACCCCCCATCGGCGATCTGCTGCGCATGACCATGCC
GCGCCGCAAGGGCCGCAGCACCTATTTCGGACAGTTGAACGCCGGCAAGA
AAAGCGTCTGCCTGGACCTGAAAGACCCGCGCGCTGTCGAATTGATCTTG
CAGCTTGCCGCAAAAAGCGATGTCGCCATCCAGAATTTCCGCCCCGGCGT
GATGCGCGGTTTCGGCCTTGGCTATACGCATATGAAGGCGCGCAACCCGA
AAATCATCTATTGCAACATGTCCGGCTTTGGCCAGGAAGGCCCCGCCGCC
GACTGGGCGGCGTTTGCCCCCATCATTCACGCCTCCGCCGGGCTGGATAT
GGCCATGATGACCTGGCAGGAAGACAAGAACAAGCCCATCAATGGCTCGG
TCCCGTTCGCCGACTATATGACCGGCGTACATGGCAATGCCGCAATTGTG
GCGGCCCTGTTCCGGCGCGAACGCACCGGCAAGGGCGAGGAAATCGACAT
CGCCATGACCGAGGTGATTTACAACGCACTGACCAATGAATTGCAGGAAG
CAAACTTTAACACGACCGGCGCACGGCTGGTTTACCGCGCACTAAAGGCG
AAAGACGGCATGTTTGTCGTCAATCCGCTGTCGCCGAATAATTATGCCGA
CCTCAGCAGATCCTGCGGCCACCCGGAATGGCCGGTGAAATATCCGCTGC
AGGTTGCCGAGCGCCAGCAGAACTGGATAAATATGCTGAACGAGGTTGAA
GAGTGGGCCAAAGACCGCACCGTTGACGAGGTGGAAAACATCATCCGTGA
AGGCGGTTGCCCGGTCGGGCAGTTGCGCCGTGTTGAAGACGCCCTGCAAC
AACCGCAATCCGTGCTGCGTAAAAGCGCCGTGGAAATCGAGGATGGCGCG
GGTTCATTCCGGGTCGCGAATACGCCGCTGCGCATGTGCGATTCCGAATC
GCGGATACGCGAGCATGTGCCGTTCCTGGGCGAGAACAATGCGGAAATCC
TGAGCGGCCTGTTAGGCCTGCCGCAGGCGGATTTCGACAAACTGGTGGAA
GAAGGCGTGATACAAAAAGAAAAGGCTGTTGCATAG
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