mRNA_P-wetherbeei_contig5427.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: D8LKN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKN8_ECTSI) HSP 1 Score: 235 bits (600), Expect = 7.060e-75 Identity = 111/162 (68.52%), Postives = 138/162 (85.19%), Query Frame = 1
Query: 256 RRGSSSSDGKIMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQGL 726
R+GSS+S IMTG +WAQ+T+++ + RGCHLITS+IVR+ PELR+F+VG+AN+ + HTSASIT+NENADPDVR D+E+ALN+IVPVKWH EMF H EGP+DMTGHVKSSL+GAS+++P+T+G+LALGTWQGVYLCEHR GGGH R I VTVQGL
Sbjct: 3 RKGSSASG--IMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGL 162
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A835YU00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU00_9STRA) HSP 1 Score: 230 bits (587), Expect = 7.520e-73 Identity = 110/164 (67.07%), Postives = 131/164 (79.88%), Query Frame = 1
Query: 250 SHRRGSSSSDGKIMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQGL 726
S R +++S I TGT W QKTI++ + RGCH+IT+DI R+ PEL++F VGVA+I I HTSAS+TINENADPDVR D+E+ALN IVP KWH E F HT EGP+DMTGHVKSSL+GASV+VPIT+GR ALGTWQG+YLCEHR GGGH R ITVT+QGL
Sbjct: 4 SRRSSANTSSADIKTGTAGWLQKTITITAPSRGCHIITNDITRQIPELQRFSVGVAHIFIKHTSASLTINENADPDVRVDMEAALNHIVPEKWHREFFTHTMEGPDDMTGHVKSSLLGASVSVPITNGRFALGTWQGIYLCEHRDSGGWGGGHARSITVTIQGL 167
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: D8LMU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU1_ECTSI) HSP 1 Score: 224 bits (571), Expect = 1.330e-69 Identity = 103/152 (67.76%), Postives = 128/152 (84.21%), Query Frame = 1
Query: 286 IMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQGL 726
I TGT WAQ+TI++ + RGCHLITS+I ++ PELR FRVG+ANI + HTSAS+TINENADPDVR D+ESALNQIVPVKWH+ MF+HT EGP+DMTGHVKS+++GAS+N+P+++G LALGTWQGVYLCEHR GGG R I +T+QG+
Sbjct: 73 IKTGTAGWAQRTITVTAPSRGCHLITSEISKQVPELRSFRVGMANIFLKHTSASLTINENADPDVRTDMESALNQIVPVKWHNTMFRHTLEGPDDMTGHVKSTIVGASLNIPVSNGGLALGTWQGVYLCEHRDTGGWGGGFARDIVITIQGI 224
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A7S2XZV0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV0_9STRA) HSP 1 Score: 212 bits (540), Expect = 2.430e-65 Identity = 96/162 (59.26%), Postives = 130/162 (80.25%), Query Frame = 1
Query: 256 RRGSSSSDGKIMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQGL 726
R SSS +G+I++GTT+W QKTIS+ + RGCHLIT ++V + PELR+F+VG A++ I HTSAS+T+NENADPDV+ DLE ALN+IVP W+ +MF HT EG +DM GHVKS+L+GA++++PI++G LGTWQG+YLCEHR GGGH R+I +T+QG+
Sbjct: 35 RSSSSSQEGQIISGTTSWMQKTISITAPSRGCHLITREVVSQLPELRRFQVGTAHLFIKHTSASLTLNENADPDVQADLEKALNRIVPESWNRDMFVHTAEGDDDMPGHVKSALVGAAISIPISNGAFNLGTWQGIYLCEHRNQGGFGGGHNRKIVITLQGI 196
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: F0W2W7_9STRA (Uncharacterized protein AlNc14C11G1345 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2W7_9STRA) HSP 1 Score: 187 bits (476), Expect = 2.150e-56 Identity = 84/144 (58.33%), Postives = 112/144 (77.78%), Query Frame = 1
Query: 307 WAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQG 723
W QK I L + RG HL+TS+I R+ PEL++ ++G+ N+ I HTSAS++INEN DPDVR+D+E A N+IVP W+ +MFKHT EG +DM HVKS+++GAS+NVPIT+G+ +GTWQG+YLCEHR GGGH R+I VT+QG
Sbjct: 2 WFQKEIRLTAPSRGFHLVTSEIERQLPELQEVKIGLCNLFIKHTSASLSINENCDPDVRDDMEKAFNRIVPESWNRDMFKHTMEGDDDMPAHVKSTVIGASINVPITNGKFNVGTWQGIYLCEHRNAGGFGGGHERKIVVTIQG 145
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A4P9ZTP0_9FUNG (Uncharacterized protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZTP0_9FUNG) HSP 1 Score: 186 bits (473), Expect = 4.870e-56 Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 1
Query: 307 WAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHRGGGHTRRITVTVQG 723
W QKT+ L + RGCHL+TSDIVRE PELR +R+G+ANI + HTSAS+T+NEN DPDVR D+E+ALN++ P + H DEGP+DM GHVKSSL+GAS+ +PI DG+ ALGTWQG++LCEHR +R + +T+QG
Sbjct: 3 WFQKTVKLSARRRGCHLVTSDIVREVPELRNYRIGLANIFLQHTSASLTLNENYDPDVRVDMETALNRLAPEDAE---YTHIDEGPDDMPGHVKSSLLGASLTIPIQDGKFALGTWQGIWLCEHRNYARSRTVVITLQG 138
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A067CHU1_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHU1_SAPPC) HSP 1 Score: 186 bits (472), Expect = 1.230e-55 Identity = 81/153 (52.94%), Postives = 113/153 (73.86%), Query Frame = 1
Query: 286 IMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQGLA 729
+ TG +AW QK I+L + RG HL+T ++ ++ PE+R F VG A + + HTSAS+++NEN DPDVR D+E A+N+IVP W+ E F+HT EG +DM H+KS+L+GAS+ VP+++G+ LGTWQG+YLCEHR G GH R+I VT+ GLA
Sbjct: 4 LRTGASAWFQKEITLKAPSRGFHLVTDEVYKQIPEIRHFSVGTATLFVKHTSASLSLNENCDPDVRIDMEGAMNRIVPESWNREFFRHTMEGDDDMPAHIKSTLIGASITVPVSNGKFNLGTWQGIYLCEHRDVGGWGNGHNRKIVVTINGLA 156
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A357LWU5_9GAMM (Uncharacterized protein n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A357LWU5_9GAMM) HSP 1 Score: 183 bits (465), Expect = 8.100e-55 Identity = 84/140 (60.00%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 304 AWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHRGGGHTRRITVTVQG 723
+W QKTI+L + PRG HLITS+IVR+ PEL +RVG+ +I I HTSAS+TINENADP VR+D E +++VP ++H DEGP+D+ H+KSSL+G SV++P+TDGRLALGTWQGVYLCEHR G +R I VT+ G
Sbjct: 2 SWVQKTITLSARPRGFHLITSEIVRQLPELADYRVGLLHIFIRHTSASLTINENADPTVRQDFEQVFSRLVPEN--EPFYRHNDEGPDDLPAHIKSSLLGPSVSIPVTDGRLALGTWQGVYLCEHRNHGGSRTIVVTLSG 139
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A024TUF5_9STRA (Secondary thiamine-phosphate synthase enzyme n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TUF5_9STRA) HSP 1 Score: 184 bits (466), Expect = 9.270e-55 Identity = 83/152 (54.61%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 286 IMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQGL 726
I TG +AW QK I L + RG HL+T ++ ++ PE+R F VG+A + + HTSAS+++NEN DPDVR D+E A+N+IVP W+ ++F HT EG +DM HVKS+L+GAS+ VP+T+GR LGTWQG+YLCEHR G GH R+I VT+ GL
Sbjct: 3 IKTGASAWFQKEIVLTAPSRGFHLVTDEVYKQVPEIRSFTVGMATLFVKHTSASLSLNENCDPDVRTDMEGAINRIVPESWNRDLFCHTMEGDDDMPAHVKSTLIGASIQVPLTNGRFNLGTWQGIYLCEHRDVGGWGHGHNRKIVVTLTGL 154
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Match: A0A8K1CHI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHI4_PYTOL) HSP 1 Score: 183 bits (465), Expect = 1.080e-54 Identity = 82/144 (56.94%), Postives = 109/144 (75.69%), Query Frame = 1
Query: 307 WAQKTISLGSHPRGCHLITSDIVREFPELRKFRVGVANIMILHTSASITINENADPDVREDLESALNQIVPVKWHHEMFKHTDEGPEDMTGHVKSSLMGASVNVPITDGRLALGTWQGVYLCEHR-----GGGHTRRITVTVQG 723
W QK I L + RG HL+T +I ++ PELR+ +VG+AN+ I HTSAS+++NEN D DVR D+E A N+IVP W+ E FKHTDEG +DM H+KS+L+GAS+N+PIT+G+ LGTWQG+YLCEHR G GH R+I +T+QG
Sbjct: 4 WFQKEIRLTAPGRGFHLVTHEIEKQLPELRQVKVGMANLFIKHTSASLSLNENCDSDVRTDMEGAFNRIVPESWNREFFKHTDEGDDDMPAHIKSTLIGASLNIPITNGKFNLGTWQGIYLCEHRNSGGWGNGHDRKIVITIQG 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5427.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5427.1.3 >prot_P-wetherbeei_contig5427.1.3 ID=prot_P-wetherbeei_contig5427.1.3|Name=mRNA_P-wetherbeei_contig5427.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp MASHRRGSSSSDGKIMTGTTAWAQKTISLGSHPRGCHLITSDIVREFPELback to top mRNA from alignment at P-wetherbeei_contig5427:1159..2765- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5427.1.3 ID=mRNA_P-wetherbeei_contig5427.1.3|Name=mRNA_P-wetherbeei_contig5427.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1607bp|location=Sequence derived from alignment at P-wetherbeei_contig5427:1159..2765- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5427:1159..2765- >mRNA_P-wetherbeei_contig5427.1.3 ID=mRNA_P-wetherbeei_contig5427.1.3|Name=mRNA_P-wetherbeei_contig5427.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig5427:1159..2765- (Phaeothamnion wetherbeei SAG_119_79)back to top |