mRNA_P-wetherbeei_contig54268.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54268.1.1
Unique NamemRNA_P-wetherbeei_contig54268.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A836C945_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C945_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.880e-23
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDALE 336
            K+V+L+VNK+DIL  A E   V  FVR+N   +LG    +F VSARLAL AK+AARP+P P+ GAGA  W  S FA  E ++  +L  EERVRSKLLSP+GVAE+V +  +E
Sbjct:  114 KKVVLIVNKLDILPEAQERNAVVEFVRRNGAHILGGEAEVFAVSARLALSAKIAARPAP-PSAGAGARQWADSNFAAFEEYMVRVLSREERVRSKLLSPIGVAEQVAERMVE 224          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A7S2C0V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0V7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.910e-19
Identity = 62/127 (48.82%), Postives = 80/127 (62.99%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGA----VPPLFPVSARLALQAKLAARPSP-DPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDALETCRRRAQVRK 366
            K+V+ VVNK+D L       EV  FVR N TA++G      P +FPVSAR AL+AKLA   SP DP+ GAG+  W+ S F  LE  + ++L  EERV +K+LSPLGVAE ++D    T  RR + RK
Sbjct:   36 KKVVFVVNKIDNLPDENAVQEVTVFVRDNGTAMMGGGPRGTPMVFPVSAREALRAKLA---SPGDPSVGAGSRHWESSRFDALEAFMTDILSKEERVNAKMLSPLGVAESLLD----TAERRLEQRK 155          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A7C3F3H3_9CHLR (GTP-binding protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3F3H3_9CHLR)

HSP 1 Score: 84.7 bits (208), Expect = 1.080e-16
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDALETCRRR 351
            K+V+L++NK+D+L    E  ++ +FVR+NA  LLG  P +FP+SARLAL AK +      P       +W++S F+ LE +I   L   ER+R KLLSPLGVA+R+V   LE   +R
Sbjct:  173 KKVVLIINKIDLLDQETEIDQIVSFVRENAQKLLGLSPEIFPLSARLALHAKTS------PPGSERDKLWERSRFSPLEGYILRTLDERERIRLKLLSPLGVAQRLVARYLEIVHQR 283          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: W7UAW7_9STRA (Dynamin family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAW7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.110e-16
Identity = 53/115 (46.09%), Postives = 79/115 (68.70%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPL--FPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDALET 339
            K+V+LV+N+ D L +  +  EV  +VR +A A+LG    L  FP+SA+LAL+AK+ A+P   P  G GA  WQ S FA L++++  LL  E +++SKLL+P+GVAER++D+A  T
Sbjct:  300 KKVVLVLNQCD-LRSREDVEEVTEYVRAHARAVLGTEADLKVFPISAKLALEAKVVAKPH-SPTVGPGALAWQASNFAALQQYLDTLLTDEAKLQSKLLNPIGVAERLLDEARHT 412          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A838NNX2_9BACT (Dynamin family protein (Fragment) n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A838NNX2_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 1.770e-16
Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERV 318
            K+++ +VNK+DILA   E AEV A+VR NA ALLG VP +FPVSAR A+QA+          T     +W++SGF  +E ++   L  EER+R KLL+PL V  R+
Sbjct:  182 KKIVFIVNKIDILAGPAEHAEVIAYVRDNAAALLGDVPQVFPVSARRAVQAR----------TEGATELWEQSGFDAVEEYLLRTLDQEERIRLKLLNPLNVGLRL 277          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A7W1A7B6_9CHLR (Dynamin family protein n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1A7B6_9CHLR)

HSP 1 Score: 84.0 bits (206), Expect = 2.020e-16
Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERV 318
            K+++L++NK+DIL  A + AEV  FVR NAT LLG  P +FPVSAR+A +A    R S D      A  WQ SGFAE+E ++   L   ERVR KLL+PLGV  R+
Sbjct:  181 KKIILIINKIDILEEA-QRAEVVQFVRTNATTLLGVEPTIFPVSARMAFRA----RESDD------AAAWQTSGFAEIEEYLLRTLDEGERVRLKLLNPLGVGLRL 275          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A0P9F0D4_9CHLR (Dynamin (Fragment) n=1 Tax=Kouleothrix aurantiaca TaxID=186479 RepID=A0A0P9F0D4_9CHLR)

HSP 1 Score: 83.6 bits (205), Expect = 2.040e-16
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDAL 333
            K++++V+NK D+L    E  +VE F+R+NA  LLG  P +FPVSARLA +A+           GAG  +WQ S F  +ER+I E L  E+RVR KLLSPLGVA  + D  L
Sbjct:    6 KKIVIVLNKADLLEPH-EIEQVETFIRENARDLLGFTPEIFPVSARLAQRAR----------AGAGDDVWQASRFDAIERYILETLDEEQRVRLKLLSPLGVARHLNDKYL 105          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A3N5FWW2_9BACT (Dynamin (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A3N5FWW2_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 2.410e-16
Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDALETCRRR 351
            K+V++V+NK+DIL +  +   + AF+  NA ALLG  P +FPV+ARLAL+AK         ATG  + +  +S FAELER I   L   ERVR KLL+PLGVAE +    LE   RR
Sbjct:   53 KKVVVVLNKIDILESPEDVERIRAFIADNARALLGFTPEIFPVAARLALRAK---------ATG-DSELMARSRFAELERFIVATLDERERVRLKLLNPLGVAENLAKKYLEVTDRR 159          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A7C3NDR0_9CHLR (GTP-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3NDR0_9CHLR)

HSP 1 Score: 83.2 bits (204), Expect = 3.770e-16
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERVVDDAL 333
            K+V++V+NK+DIL +  E A+V+ FV +N  AL G VP  FPVSARLAL+AK       +PA      +WQ+S F  LER+I+E L    R+R K L+PLGV +R+V+  L
Sbjct:  189 KKVVVVLNKIDILQSQSEIAQVQDFVVENFRALFGMVPEAFPVSARLALRAKQG-----EPA------LWQESRFEALERYIKETLDESSRLRLKFLNPLGVGQRLVEKFL 288          
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Match: A0A497C4V0_9CHLR (Dynamin n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497C4V0_9CHLR)

HSP 1 Score: 82.0 bits (201), Expect = 9.520e-16
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 1
Query:    1 KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQAKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPLGVAERV 318
            K+V+LV+NK+DIL T     EVE FV +N   LL   P +FPVSA+LALQAK     S  PA      +W+KS F  LER+IQE L  + R++ KLL+PLGV +R+
Sbjct:  172 KKVVLVINKIDILQTPQALEEVEEFVSENIKKLLKVDPVIFPVSAKLALQAK-----SGHPA------VWEKSRFESLERYIQETLDEQSRLKLKLLNPLGVGKRL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54268.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C945_9STRA2.880e-2354.46P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2C0V7_9STRA3.910e-1948.82Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7C3F3H3_9CHLR1.080e-1644.44GTP-binding protein n=1 Tax=Caldilineae bacterium ... [more]
W7UAW7_9STRA1.110e-1646.09Dynamin family protein n=3 Tax=Monodopsidaceae Tax... [more]
A0A838NNX2_9BACT1.770e-1647.17Dynamin family protein (Fragment) n=1 Tax=Gemmatim... [more]
A0A7W1A7B6_9CHLR2.020e-1650.94Dynamin family protein n=1 Tax=Herpetosiphonaceae ... [more]
A0A0P9F0D4_9CHLR2.040e-1647.75Dynamin (Fragment) n=1 Tax=Kouleothrix aurantiaca ... [more]
A0A3N5FWW2_9BACT2.410e-1647.86Dynamin (Fragment) n=1 Tax=bacterium TaxID=1869227... [more]
A0A7C3NDR0_9CHLR3.770e-1647.75GTP-binding protein n=1 Tax=Chloroflexi bacterium ... [more]
A0A497C4V0_9CHLR9.520e-1650.00Dynamin n=1 Tax=Chloroflexi bacterium TaxID=202672... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54268contigP-wetherbeei_contig54268:122..487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1128421.JAGA01000002_gene1230
PFAMsDynamin_N
Model size366
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.42e-16
EggNOG OGsCOG0699@1|root,COG0699@2|Bacteria,2NQN2@2323|unclassified Bacteria
DescriptionDynamin family
Cds size366
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186811.211812-CDS-P-wetherbeei_contig54268:121..4871683186811.211812-CDS-P-wetherbeei_contig54268:121..487Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54268 122..487 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54268.1.1prot_P-wetherbeei_contig54268.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54268 122..487 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54268.1.1

>prot_P-wetherbeei_contig54268.1.1 ID=prot_P-wetherbeei_contig54268.1.1|Name=mRNA_P-wetherbeei_contig54268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
KQVLLVVNKVDILATAVEAAEVEAFVRQNATALLGAVPPLFPVSARLALQ
AKLAARPSPDPATGAGAGMWQKSGFAELERHIQELLKTEERVRSKLLSPL
GVAERVVDDALETCRRRAQVRK
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mRNA from alignment at P-wetherbeei_contig54268:122..487+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54268.1.1 ID=mRNA_P-wetherbeei_contig54268.1.1|Name=mRNA_P-wetherbeei_contig54268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig54268:122..487+ (Phaeothamnion wetherbeei SAG_119_79)
AAGCAGGTGCTGCTGGTGGTCAACAAGGTGGACATCCTCGCGACGGCCGT GGAGGCCGCCGAGGTTGAGGCCTTTGTCCGTCAAAACGCCACTGCGCTCC TCGGCGCCGTCCCGCCACTGTTTCCCGTCTCGGCCCGGCTGGCGCTGCAA GCCAAGCTAGCGGCTCGCCCCAGCCCGGACCCGGCGACGGGCGCCGGCGC CGGCATGTGGCAGAAGTCAGGATTTGCGGAGCTGGAGCGGCACATTCAAG AGCTGTTGAAGACAGAGGAGCGGGTGCGCTCAAAGCTGCTGAGCCCCCTG GGCGTGGCAGAGCGGGTGGTGGACGATGCGCTCGAGACGTGCCGCCGGCG CGCCCAGGTGAGGAAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54268:122..487+

>mRNA_P-wetherbeei_contig54268.1.1 ID=mRNA_P-wetherbeei_contig54268.1.1|Name=mRNA_P-wetherbeei_contig54268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig54268:122..487+ (Phaeothamnion wetherbeei SAG_119_79)
AAGCAGGTGCTGCTGGTGGTCAACAAGGTGGACATCCTCGCGACGGCCGT
GGAGGCCGCCGAGGTTGAGGCCTTTGTCCGTCAAAACGCCACTGCGCTCC
TCGGCGCCGTCCCGCCACTGTTTCCCGTCTCGGCCCGGCTGGCGCTGCAA
GCCAAGCTAGCGGCTCGCCCCAGCCCGGACCCGGCGACGGGCGCCGGCGC
CGGCATGTGGCAGAAGTCAGGATTTGCGGAGCTGGAGCGGCACATTCAAG
AGCTGTTGAAGACAGAGGAGCGGGTGCGCTCAAAGCTGCTGAGCCCCCTG
GGCGTGGCAGAGCGGGTGGTGGACGATGCGCTCGAGACGTGCCGCCGGCG
CGCCCAGGTGAGGAAA
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