mRNA_P-wetherbeei_contig5424.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5424.1.3
Unique NamemRNA_P-wetherbeei_contig5424.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: D8LQL4_ECTSI (Carbamoyl-phosphate synthase (Glutamine-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL4_ECTSI)

HSP 1 Score: 817 bits (2111), Expect = 4.260e-281
Identity = 411/557 (73.79%), Postives = 469/557 (84.20%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLA-FDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            ATSSL D  + E  P I     R L  + R+ GAMLG++E+EG   +A F DPNKRNLVAEVS   P+VYGKGN ++VLAVDCG+KNNIIR+L KKGAEVT+VPWD+DLS D   +DG+FLSNGPGDPTMCV T+ Q++KI+AL  +   PIFGIC+GNQL+GLAAG  A KLPFGNRGQNQPV+NR T ECYITPQNHGYAI+D  L +GW+ LF+NVNDGTNEG+ HE++P+F+AQFHPEAQGGPTDTEFLFDVFL     AKSG +G      R  PP     + ++KK L+LGSGGLSIGQAGEFDYSGSQAIKALKEEG+EV+LMNPNIASVQTN D+KSPHKADQVFFLPV P FVE VIKRE+PDGIVVSMGGQTALNCAV+++ AG L+KYNVKVLGTP+Q+I+ TEDRDVFN KL EIGEK+APS+AV G+E AV AA  IGFPVMIRSAYALGGLGSGIC+ E  LRDMG KALSLS+QILVEKSLRGWKEVEYEVVRD+ +NCITVCNMENFDPLGVHTGDSIV+APSQTLSNTEYHMLR+TALKV
Sbjct:  115 ATSSLGDWLKEEGIPAIGGIDTRHLTKKIRDKGAMLGKLEVEGGGEIASFSDPNKRNLVAEVSITEPRVYGKGNPIKVLAVDCGVKNNIIRILCKKGAEVTLVPWDYDLSADAHKFDGIFLSNGPGDPTMCVSTVKQMEKIIALEGDDMKPIFGICMGNQLVGLAAGCTAEKLPFGNRGQNQPVVNRLTNECYITPQNHGYAIDDTKLGQGWQPLFTNVNDGTNEGVRHETKPFFSAQFHPEAQGGPTDTEFLFDVFLE---AAKSGHRGAIDFAKRSAPP----AKPDIKKALMLGSGGLSIGQAGEFDYSGSQAIKALKEEGIEVILMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEHVIKREKPDGIVVSMGGQTALNCAVQLHEAGILEKYNVKVLGTPVQAIMATEDRDVFNQKLMEIGEKVAPSEAVVGVEAAVVAAKKIGFPVMIRSAYALGGLGSGICDTEEALRDMGSKALSLSNQILVEKSLRGWKEVEYEVVRDSVNNCITVCNMENFDPLGVHTGDSIVVAPSQTLSNTEYHMLRQTALKV 664
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A7S2YNC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNC7_9STRA)

HSP 1 Score: 742 bits (1915), Expect = 2.970e-257
Identity = 372/538 (69.14%), Postives = 436/538 (81.04%), Query Frame = 1 
Query:   61 RKLANRKRNAGAMLGRIEMEGDAP----LAFDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            R L  + R  GA+LGRIE++ DAP         PN R+LV EVS K  K+YGKGN  +V+AVD G+K NIIR LVK+G E+TVVPW+H  + +L NYDGLFLSNGPG+PTMC  TI +L+K++    ++  PIFGICLGNQL+GLAAG +A KLPFGNRGQNQPVLN  TGECYITPQNHG+ I+  TL  GW+TLF+N NDG+NEGIAHE+RPYFTAQFHPEA  GPTDTEF+FD F+    EA          PVR PPP P+P   E+KKVLLLGSGG SIGQAGEFDYSG QAIKALKEEGVEVVLMNPNIASVQTN DDKS  KAD VFFLPV P FVE+VIK+E+PDGIV+SMGGQTALNCA+EM+ AGTL KY VKVLGT +  +INTEDR +F+ +L EI EKIA S + + +EEA++A+  +GFP+MIRSA+ALGGLGSGIC+DEA LR+M  KALS++ QILVEKS++GWKEVEYEVVRDA DNC+TVCNMENFDPLG+HTG+SIV+APSQTLSN EYHMLRETA+KV
Sbjct:  139 RLLTKKIREKGALLGRIEIDLDAPGPDFAKMASPNARHLVDEVSTKEVKIYGKGNPTKVIAVDGGMKFNIIRQLVKRGVELTVVPWNHPFASELKNYDGLFLSNGPGNPTMCDATIKELEKVVNCPDDEVKPIFGICLGNQLMGLAAGGQAKKLPFGNRGQNQPVLNHQTGECYITPQNHGFVIDCDTLKPGWKTLFTNANDGSNEGIAHETRPYFTAQFHPEAASGPTDTEFMFDTFI----EACKKPTAKITFPVRDPPP-PRP---EVKKVLLLGSGGTSIGQAGEFDYSGGQAIKALKEEGVEVVLMNPNIASVQTNSDDKSESKADHVFFLPVTPEFVEEVIKKEKPDGIVISMGGQTALNCAIEMWEAGTLQKYGVKVLGTQVDVVINTEDRQLFSDRLNEINEKIAESYSADTVEEAIEASKKVGFPLMIRSAFALGGLGSGICDDEAHLREMANKALSVAPQILVEKSMKGWKEVEYEVVRDANDNCVTVCNMENFDPLGIHTGESIVMAPSQTLSNEEYHMLRETAVKV 668
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A835YNS3_9STRA (Carbamoyl-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS3_9STRA)

HSP 1 Score: 756 bits (1952), Expect = 3.300e-257
Identity = 392/564 (69.50%), Postives = 454/564 (80.50%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEG-DAPLAFDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILA-----LAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPR-PQPVRLE-MKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            A SSL D  + +  P I     R +  + R+ G MLGR+E+EG  + L F DPNK+NLVAEVS    +V+GK NG++VL VDCGIK NI+R LV KGAEVT+VP D+DL   L N+DGLFLSNGPGDPTM   TI+ L+++L+      AP K  PIFGICLGNQL+ LAAGAKA KLPFGNRGQNQPV N  TG+CYITPQNHGYAIED+TLP GW+TLF+N+NDGTNEG+ HESRPYFTAQFHPEA  GPTDTEFLFDVFL H        +  A G + FP PR P+  R   +KK LLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEV+LMNPNIASVQTN+D KS HKAD+VFFLPVNP +VEQV+KRE+PDGIV+SMGGQTALNCAVE+Y AGT +KYNVKVLGTP+++I+ TEDRDVF  KLAEI EK+APS+A   +  A+ AA  IG+PVM+R+AYALGGLGSGIC +E + + + ++AL LS Q+LVEKSL GWKEVEYEVVRD  DNCITVCNMENFDPLGVHTGDSIV+APSQTLSN EYHMLRETA+KV
Sbjct:  115 AVSSLGDWLKEQGVPGICGLDTRLITKKIRDQGVMLGRLEVEGRGSELGFSDPNKKNLVAEVSTPEVRVFGKENGIKVLCVDCGIKLNIVRKLVNKGAEVTMVPHDYDLVSALPNFDGLFLSNGPGDPTMASATIAALRQVLSDVEAGKAPVK--PIFGICLGNQLVSLAAGAKAVKLPFGNRGQNQPVRNVVTGDCYITPQNHGYAIEDSTLPAGWKTLFTNINDGTNEGVYHESRPYFTAQFHPEADSGPTDTEFLFDVFLDHC-------RSKATGAIAFPKPRIPRTPRDHPIKKCLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVILMNPNIASVQTNVDTKSLHKADEVFFLPVNPHYVEQVLKREKPDGIVISMGGQTALNCAVELYKAGTFEKYNVKVLGTPVEAIMATEDRDVFKDKLAEIDEKVAPSEACCDVPAALAAAKRIGYPVMVRAAYALGGLGSGICENEEQTQALCQRALVLSPQVLVEKSLWGWKEVEYEVVRDRNDNCITVCNMENFDPLGVHTGDSIVVAPSQTLSNAEYHMLRETAIKV 669
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A1Z5JGP6_FISSO (Carbamoyl-phosphate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGP6_FISSO)

HSP 1 Score: 756 bits (1952), Expect = 6.190e-257
Identity = 377/561 (67.20%), Postives = 447/561 (79.68%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLA----FDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHA-TEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            A SSL D  + E  P + +   R L  + R  GAMLGRIE++ +AP+       DPNKR+LV EVS K P VYGKGN  +V+AVDCG+K +IIR LVK+G E+TVVPW++  + D+  YDGLFLSNGPGDP MC+ET+ +L+K++    ++  PI+GIC+GNQL+GLAAG KA KLPFGNRGQNQPVLN  TGECYITPQNHGY I+ +TL  GW+TLF+N NDG+NEGI HE+RPYFTAQFHPEA  GPTDTEF+FD FL    ++ K GK       ++FP  +P P   ++KKVLLLGSGG SIGQAGEFDYSG QAIKALKEEG EVVLMNPNIASVQTN DDKS  KAD VFFLPV P FVE+VIK+E+PDG+VVSMGGQTALNCAVEMYLAGT  KY V VLGTPI+S+INTEDR +F+ +L EI EKIA S   + +++AV+ A  +G+P MIRSA+ALGGLGSGIC DE  L+DM RKALS+S QILVEKS++GWKEVEYEVVRD  DNC+TVCNMENFDPLG+HTGDSIV+APSQTLS+ EYHMLRETA+KV
Sbjct:  142 AASSLGDWLKEEGVPGLCDIDTRMLTKKIREKGAMLGRIEVDLNAPVPDFSKMVDPNKRHLVGEVSVKEPTVYGKGNPTKVIAVDCGMKYSIIRQLVKRGVELTVVPWNYPFAADMHKYDGLFLSNGPGDPNMCMETVKELEKVITCPEDQIKPIYGICMGNQLIGLAAGGKAVKLPFGNRGQNQPVLNHQTGECYITPQNHGYHIDTSTLKPGWKTLFTNANDGSNEGIGHETRPYFTAQFHPEASSGPTDTEFMFDTFLDACRSKLKDGK-------IKFPDRKPAPTPPKVKKVLLLGSGGTSIGQAGEFDYSGGQAIKALKEEGCEVVLMNPNIASVQTNTDDKSTSKADHVFFLPVTPDFVEEVIKKEKPDGVVVSMGGQTALNCAVEMYLAGTFQKYGVHVLGTPIESVINTEDRQLFSDRLNEINEKIAESYTADTIDQAVEHARKVGYPCMIRSAFALGGLGSGICQDEPHLKDMARKALSVSPQILVEKSMKGWKEVEYEVVRDVYDNCVTVCNMENFDPLGIHTGDSIVMAPSQTLSDEEYHMLRETAIKV 695
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A7S1B966_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B966_9STRA)

HSP 1 Score: 752 bits (1941), Expect = 2.950e-255
Identity = 377/546 (69.05%), Postives = 434/546 (79.49%), Query Frame = 1 
Query:   37 PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLAF----DDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            P I     R L  + R  GA+LGRIE++  AP+        PN RNLVAEVS     VYG GN ++++AVDCG+KNNIIR LVK+GAE+TVVPWD+  +  +  YDGLFLSNGPGDPTMCVETI QL+K++ L+  +  PIFGICLGNQL+GLAAG KA KLPFGNRGQNQPV+N  TGE YITPQNHGYAI+  TL + W+TLF+N+NDGTNEGI H SRPY TAQFHPEA  GPTDTEFLFD FL    E  +G        ++FP  +  P +  +KKVLLLGSGG SIGQAGEFDYSG QAIKALKEEG+EVVLMNPNIASVQTN+DDKS  KAD VFFLPV P+FVE+VIKRE+PDGIVVSMGGQTALNCAVEMYLAGT DKYN++VLGT I ++INTEDR +F+ KL EI EKIA S     ++E    A  IGFP+MIRSA+ALGGLGSGIC+DEA  R+M  +ALS+S QILVE+S++GWKEVEYEVVRD  DNCITVCNMENFDPLGVHTGDSIV+APSQTLSN EYHMLR+TALKV
Sbjct:  161 PAICGIDTRMLTKKIRETGALLGRIEIDDTAPVPDWSQQASPNARNLVAEVSVPEVNVYGAGNPLKIIAVDCGMKNNIIRQLVKRGAELTVVPWDYPFAEKMGEYDGLFLSNGPGDPTMCVETIEQLEKVIGLSEGEMKPIFGICLGNQLMGLAAGGKAVKLPFGNRGQNQPVINDVTGEAYITPQNHGYAIDRTTLTENWKTLFTNLNDGTNEGIIHTSRPYMTAQFHPEAANGPTDTEFLFDTFLNACREPSTG--------IKFPRRKVAPPKPNVKKVLLLGSGGTSIGQAGEFDYSGGQAIKALKEEGMEVVLMNPNIASVQTNVDDKSETKADHVFFLPVTPSFVEEVIKREKPDGIVVSMGGQTALNCAVEMYLAGTFDKYNLQVLGTQIDAVINTEDRQIFSDKLHEIDEKIAESYTATTVDEGYAHAQKIGFPLMIRSAFALGGLGSGICHDEAHFRNMAAQALSVSPQILVERSMKGWKEVEYEVVRDCYDNCITVCNMENFDPLGVHTGDSIVMAPSQTLSNEEYHMLRQTALKV 698
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A7S2UQ81_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ81_9STRA)

HSP 1 Score: 745 bits (1924), Expect = 1.320e-252
Identity = 377/560 (67.32%), Postives = 445/560 (79.46%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLA----FDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            A+SSL D  + E  P I +   R L  + R  GAMLGRIE++ DAP         PN R+LV EVS K  K+YGKGN  +++AVDCG+K NIIR L ++GAE+TVVPW++  + ++  YDGLFLSNGPGDP MCVET+ QL+K++AL   +  PIFGICLGNQL+G+AAG KA KLPFGNRGQNQPVLN  TGECYITPQNHGY I   TL  GW+TLF+N NDG+NEGIAHE+RPYFTAQFHPEA  GP+DTEF+FD FL       + KK +    + FP  +P P   ++K++LLLGSGG SIGQAGEFDYSG QAIKALKEEG EV+LMNPNIASVQTNMDDKS  KAD V+FLPV P FVE++IK+E+PDGIVVSMGGQTALNCAVE+Y AG  DKYNV+VLGTPI  +I+TEDR  F+ K+ EIGE IA S AV  +E+AV+AA  IG+P+MIRSA+ALGGLGSGIC DEA LR+MG  ALS S QILVEKS++GWKEVEYEVVRD+ DNC+TVCNMENFDPLG+HTGDSIV+APSQTLSN EYHMLR+TA+KV
Sbjct:  155 ASSSLGDWLKEEGIPGISDLDTRMLTKKIRENGAMLGRIEIDPDAPAPDFANMQSPNVRHLVDEVSIKETKIYGKGNPTKIIAVDCGMKYNIIRRLCERGAELTVVPWNYPFAQEMHKYDGLFLSNGPGDPVMCVETVEQLEKVIALPDNEVKPIFGICLGNQLMGIAAGGKAEKLPFGNRGQNQPVLNHQTGECYITPQNHGYHINTETLKPGWKTLFTNANDGSNEGIAHETRPYFTAQFHPEANCGPSDTEFMFDTFL------DACKKPLDK--ITFPQRKPAPPVPDVKRILLLGSGGTSIGQAGEFDYSGGQAIKALKEEGKEVILMNPNIASVQTNMDDKSASKADHVYFLPVTPDFVEEIIKKEKPDGIVVSMGGQTALNCAVELYRAGIFDKYNVQVLGTPISVVIDTEDRQSFSDKINEIGESIAESYAVYNVEDAVEAAKKIGYPLMIRSAFALGGLGSGICVDEAMLREMGAMALSTSDQILVEKSMKGWKEVEYEVVRDSHDNCVTVCNMENFDPLGIHTGDSIVMAPSQTLSNEEYHMLRDTAIKV 706
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A448ZEC0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEC0_9STRA)

HSP 1 Score: 737 bits (1903), Expect = 1.400e-250
Identity = 376/559 (67.26%), Postives = 443/559 (79.25%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPL----AFDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALK 1659
            A SSL D  + +  P +     R L  + R +GA++GRIE++ DAP        + N R+LV EVS K P VYGKGN  +V+AVDCG+KNNIIR LVK+G E+TVVPWD+  + ++  YDGLFLSNGPGDPTMC ETI++L+K++++  ++  PI+GICLGNQL+GLAAG +A KLPFG+RGQNQPVLN  TGECYITPQNHG+ I+  TL  GW+TLF+N NDG+NEGIAH SRPYFTAQFHPEA  GP DTEF+FD FL    EA S        PVR PPP P+P   ++KKVLLLGSGG SIGQAGEFDYSG QAIKALKEEG EVVLMNPNIASVQTNMD KS  KAD  FFLPV P FVE+VIK+E+PDGIVVSMGGQTALNCAVEMY AGTL KY V+VLGTPI  +INTEDR +F+ +L EI EKIA S   + +EEAV+AA  IG+P+MIRSA+ALGGLGSG+C DE  LR M R+ALS S QILVE+S++GWKEVEYEVVRDA DNC+TVCNMENFDPLG+HTGDS+V+APSQTLS+ EYHMLR TA+K
Sbjct:   62 AASSLGDWMKEQGVPGLSGIDTRMLTKKIRESGALMGRIEVDLDAPAPDFSTIQNANLRHLVDEVSIKEPVVYGKGNATKVIAVDCGMKNNIIRHLVKRGVELTVVPWDYPFASEMHLYDGLFLSNGPGDPTMCKETIAELEKVISVPDDQVKPIYGICLGNQLMGLAAGGQAEKLPFGHRGQNQPVLNHQTGECYITPQNHGFVIDCTTLRPGWKTLFTNANDGSNEGIAHTSRPYFTAQFHPEAASGPCDTEFMFDTFL----EACSKPMDKITFPVRKPPP-PRP---DVKKVLLLGSGGTSIGQAGEFDYSGGQAIKALKEEGKEVVLMNPNIASVQTNMDSKSEFKADHTFFLPVTPEFVEEVIKKEKPDGIVVSMGGQTALNCAVEMYEAGTLQKYGVEVLGTPIDVVINTEDRQLFSDRLNEINEKIAKSYTADTVEEAVEAAKEIGYPLMIRSAFALGGLGSGMCYDEDHLRHMARQALSTSPQILVERSMKGWKEVEYEVVRDAYDNCVTVCNMENFDPLGIHTGDSMVMAPSQTLSDEEYHMLRNTAIK 612
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: B8BZG0_THAPS (CPSase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZG0_THAPS)

HSP 1 Score: 737 bits (1902), Expect = 7.970e-250
Identity = 368/559 (65.83%), Postives = 443/559 (79.25%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPL--AFDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPH-KADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            A SSL D  + E  P + +   R L  + R  GAM+GRIE++ DAP   ++ +PN R+LVAEVS K PK YGKGN ++++ VDCG+K N+IR+LV +G E+TVVPWDH  + D+  YDG+FLSNGPGDPT C ETI QL+  +++   +  PIFGICLGNQLLG+AAG +A KLPFGNRGQNQPV+N ATGECYIT QNHGY I+  TL  G++ LF+N+NDG+NEG  HESRPYFTAQFHPE + GPTDTEF+FD FL    + K+        P++FP  +P P +  +KK+LLLGSGG SIGQAGEFDYSG QAIKALKEEG EVVLMNPNIASVQTNMDDKS H KAD  +FLPV P FVE++IK+E+P+GIVVSMGGQTALNCAVE+Y AG  DKYNV+VLGTPI+S+INTEDR +F+ +L EI EKIA S   E +E+AV AA   G+P+MIRSA+ALGGLGSGIC DEA LR+  +KAL+ S QILVEKS+ GWKEVEYEVVRD  DNC+TVCNMENFDPLG+HTGDSIV+APSQTLS+ EYHMLRETA++V
Sbjct:  115 AASSLGDWLKEEGIPGLCDIDTRMLTKKIREKGAMVGRIEVDMDAPAPTSWHNPNMRHLVAEVSIKEPKTYGKGNPIKIMGVDCGMKYNMIRLLVDRGCELTVVPWDHPFAADMHKYDGIFLSNGPGDPTYCKETIEQLKMAISVPDSEVKPIFGICLGNQLLGIAAGGEAKKLPFGNRGQNQPVINHATGECYITSQNHGYHIDTTTLGSGYKELFTNLNDGSNEGFIHESRPYFTAQFHPEFKNGPTDTEFMFDTFLAACKDPKA--------PIQFPVRKPAPPKPNVKKILLLGSGGTSIGQAGEFDYSGGQAIKALKEEGKEVVLMNPNIASVQTNMDDKSSHNKADHTYFLPVTPDFVEEIIKKEKPEGIVVSMGGQTALNCAVELYKAGIFDKYNVQVLGTPIESVINTEDRQLFSDRLHEINEKIAESYTAENIEDAVIAAGKTGYPLMIRSAFALGGLGSGICVDEAHLRENAKKALATSPQILVEKSMLGWKEVEYEVVRDIYDNCVTVCNMENFDPLGIHTGDSIVMAPSQTLSDEEYHMLRETAIRV 665
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BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: B7GEG8_PHATC (CPS III, carbamoyl-phosphate synthase mitochindrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEG8_PHATC)

HSP 1 Score: 732 bits (1889), Expect = 3.930e-248
Identity = 370/560 (66.07%), Postives = 441/560 (78.75%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLA----FDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            A SSL D  + E  P + +   R L  + R  GAML RIE++ DAP+       DPN R+LV EVS K  KVYGKGN  +V+AVD G+K NIIR L K+G E+TVVPWD+  + ++  YDGLFLSNGPGDP MC  TI +L+K++++   +  PIFGICLGNQL+G+AAG  A KLPFGNRGQNQPVLN  TGECYITPQNHG+ I+ ATL  GW+TLF+N NDG+NEGIAHE+RPYFTAQFHPEA  GPTDTEF+FD FL      ++ KK +    +RFP  +P P R   KKVLLLGSGG SIGQAGEFDYSG QAIKALKEEG+EVVLMNPNIASVQTN DDKS  KAD VFFLPV P FVE+VIK+E+PDG+++SMGGQTALNCAV+M+ +GT +KY VK+LGT I ++INTEDR +F+ +L EI EKIA S   + + EAV+ A  +G+P+MIRSA+ALGGLGSGIC DE  L+DM +KALS+S QILVEKS++GWKEVEYEVVRD  DNC+TVCNMENFDPLG+HTGDSIV+APSQTLSN EYHMLRETA+KV
Sbjct:   90 AASSLGDWLKEEGIPGLSDIDTRMLTKKIREKGAMLARIEVDLDAPVPDFGKMVDPNARHLVNEVSTKEVKVYGKGNPTKVIAVDGGMKFNIIRQLCKRGVELTVVPWDYPFASEMHKYDGLFLSNGPGDPVMCDVTIKELEKVISVPDSEVKPIFGICLGNQLMGIAAGGIAKKLPFGNRGQNQPVLNHQTGECYITPQNHGFHIDCATLKPGWKTLFTNANDGSNEGIAHETRPYFTAQFHPEASSGPTDTEFMFDTFL------EACKKPMDK--IRFPVRKPAPPRSNAKKVLLLGSGGTSIGQAGEFDYSGGQAIKALKEEGLEVVLMNPNIASVQTNTDDKSASKADHVFFLPVTPEFVEEVIKKEKPDGVIISMGGQTALNCAVQMHESGTFEKYGVKILGTQIPAVINTEDRQLFSDRLNEINEKIAESYTAQTIPEAVEHAKKVGYPLMIRSAFALGGLGSGICVDEDHLKDMAKKALSVSPQILVEKSMKGWKEVEYEVVRDTHDNCVTVCNMENFDPLGIHTGDSIVMAPSQTLSNEEYHMLRETAIKV 641
[Close]
BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Match: A0A662Y587_9STRA (ATP-grasp domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y587_9STRA)

HSP 1 Score: 711 bits (1835), Expect = 3.840e-247
Identity = 368/556 (66.19%), Postives = 426/556 (76.62%), Query Frame = 1 
Query:    1 ATSSLHDLPELE--PEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLAFDDPNKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVVPWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAIEDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFLFDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSIGQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVFFLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKVLGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFPVMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRETALKV 1662
            A  SL +  E E  P I     R +  + R+ GAM GRI +EG     F DPN+ NL A VS K  K++G+GN +++LAVDCGIK NIIR L  +GAEV +VPW+HD+S ++  YDGLF+SNGPGDP +  ET  QL K +AL  +   PIFGICLGNQLLG AAGA   KLPFGNRGQNQPV N  TG+ YIT QNHGYA++  TLP  W  LF N NDGTNEGI H+S+PYFTAQFHPE  GGPTDTEFLFD FL  A  AK        GP+     RP   R ++KKVL+LGSGGLSIGQAGEFDYSGSQAIKALKEE +E +L+NPNIASVQTN+D  S  +A  V++LPVNP FVEQVIKRERPDGI++SMGGQTALNC VE++  G L KY V+V+GT I  I  TEDR++FN KLAEI E +A S+AVE ++EAV+AAY IGFPVMIRSA+ALGGLGSGIC DEAELR M +KA + S QILVE+S++GWKEVEYEVVRDAA NCITVCNMENFDPLG+HTGDSIVIAPSQTLSN EYHMLRETALKV
Sbjct:  141 AAQSLSEWLESEGIPGIAGLDTRAITKKIRSTGAMAGRIIVEGSDTPDFVDPNETNLAALVSTKEVKIFGEGNPLKILAVDCGIKYNIIRSLCARGAEVKLVPWNHDISSEIGWYDGLFISNGPGDPAIMEETTKQLAKAMALQGDDVKPIFGICLGNQLLGRAAGANTYKLPFGNRGQNQPVNNLKTGQSYITAQNHGYALDGKTLPSEWDELFVNANDGTNEGIIHKSKPYFTAQFHPEHCGGPTDTEFLFDTFL-DAVRAKE------KGPITSLVQRPIIARPQVKKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEENIETILINPNIASVQTNIDRSSEAQASNVYYLPVNPDFVEQVIKRERPDGILISMGGQTALNCGVELHEKGILQKYGVQVMGTQIDVINATEDREIFNQKLAEINEHVAQSEAVESVDEAVRAAYEIGFPVMIRSAFALGGLGSGICEDEAELRRMAQKAFAGSPQILVERSMKGWKEVEYEVVRDAAGNCITVCNMENFDPLGIHTGDSIVIAPSQTLSNREYHMLRETALKV 689
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5424.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQL4_ECTSI4.260e-28173.79Carbamoyl-phosphate synthase (Glutamine-hydrolyzin... [more]
A0A7S2YNC7_9STRA2.970e-25769.14Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A835YNS3_9STRA3.300e-25769.50Carbamoyl-phosphate synthase n=1 Tax=Tribonema min... [more]
A0A1Z5JGP6_FISSO6.190e-25767.20Carbamoyl-phosphate synthase n=2 Tax=Fistulifera s... [more]
A0A7S1B966_9STRA2.950e-25569.05Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2UQ81_9STRA1.320e-25267.32Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A448ZEC0_9STRA1.400e-25067.26Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B8BZG0_THAPS7.970e-25065.83CPSase n=1 Tax=Thalassiosira pseudonana TaxID=3512... [more]
B7GEG8_PHATC3.930e-24866.07CPS III, carbamoyl-phosphate synthase mitochindria... [more]
A0A662Y587_9STRA3.840e-24766.19ATP-grasp domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5424contigP-wetherbeei_contig5424:470..3788 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQL4
Preferred nameCPS1
PFAMsCPSase_L_D2,CPSase_L_D3,CPSase_sm_chain,GATase,MGS
Model size1662
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00010,RC00043,RC00064,RC00632,RC02750,RC02798,RC02804,RC02850,RC03314
KEGG koko:K01948,ko:K11540
KEGG ReactionR00149,R00256,R00575,R01395,R01397,R01993,R10948,R10949
KEGG Pathwayko00220,ko00240,ko00250,ko00910,ko01100,ko01120,ko01200,ko01230,map00220,map00240,map00250,map00910,map01100,map01120,map01200,map01230
KEGG ModuleM00029,M00051
Hectar predicted targeting categoryother localisation
GOsGO:0000050,GO:0000052,GO:0000096,GO:0000166,GO:0001101,GO:0001505,GO:0001889,GO:0002237,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004175,GO:0005488,GO:0005509,GO:0005524,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006508,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006725,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007494,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008289,GO:0008652,GO:0009056,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009295,GO:0009410,GO:0009605,GO:0009607,GO:0009617,GO:0009636,GO:0009719,GO:0009725,GO:0009888,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010243,GO:0014070,GO:0014074,GO:0014075,GO:0016020,GO:0016042,GO:0016053,GO:0016595,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018130,GO:0019240,GO:0019433,GO:0019538,GO:0019627,GO:0019637,GO:0019752,GO:0019856,GO:0019866,GO:0030154,GO:0030554,GO:0030855,GO:0031090,GO:0031406,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032094,GO:0032496,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032991,GO:0033762,GO:0033993,GO:0034201,GO:0034641,GO:0035150,GO:0035295,GO:0035296,GO:0035639,GO:0036094,GO:0042133,GO:0042221,GO:0042311,GO:0042493,GO:0042592,GO:0042594,GO:0042645,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044283,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046112,GO:0046209,GO:0046394,GO:0046461,GO:0046464,GO:0046483,GO:0046486,GO:0046503,GO:0046683,GO:0046872,GO:0048513,GO:0048545,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050667,GO:0050801,GO:0050880,GO:0050896,GO:0051384,GO:0051591,GO:0051704,GO:0051707,GO:0051716,GO:0055081,GO:0055086,GO:0055123,GO:0060416,GO:0060429,GO:0061008,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070365,GO:0070408,GO:0070409,GO:0070542,GO:0070848,GO:0070887,GO:0071229,GO:0071310,GO:0071320,GO:0071363,GO:0071375,GO:0071377,GO:0071396,GO:0071398,GO:0071400,GO:0071407,GO:0071417,GO:0071495,GO:0071548,GO:0071704,GO:0071774,GO:0071941,GO:0072341,GO:0072527,GO:0072528,GO:0072593,GO:0090066,GO:0090407,GO:0097159,GO:0097237,GO:0097327,GO:0097367,GO:0097746,GO:0097755,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903717,GO:1903718,GO:2001057
Exons6
Evalue6.98e-282
EggNOG OGsCOG0458@1|root,KOG0370@2759|Eukaryota
EC2.1.3.2,3.5.2.3,6.3.4.16,6.3.5.5
Descriptioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Cds size1662
COG categoryEF
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5424.1.3prot_P-wetherbeei_contig5424.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5424 470..3788 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186810.9384398-CDS-P-wetherbeei_contig5424:469..6801683186810.9384398-CDS-P-wetherbeei_contig5424:469..680Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5424 470..680 -
1683186810.9485483-CDS-P-wetherbeei_contig5424:963..11181683186810.9485483-CDS-P-wetherbeei_contig5424:963..1118Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5424 964..1118 -
1683186810.9565816-CDS-P-wetherbeei_contig5424:1286..15381683186810.9565816-CDS-P-wetherbeei_contig5424:1286..1538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5424 1287..1538 -
1683186810.9647052-CDS-P-wetherbeei_contig5424:1931..21081683186810.9647052-CDS-P-wetherbeei_contig5424:1931..2108Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5424 1932..2108 -
1683186810.972725-CDS-P-wetherbeei_contig5424:2470..30491683186810.972725-CDS-P-wetherbeei_contig5424:2470..3049Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5424 2471..3049 -
1683186810.9809377-CDS-P-wetherbeei_contig5424:3500..37881683186810.9809377-CDS-P-wetherbeei_contig5424:3500..3788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5424 3501..3788 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5424.1.3

>prot_P-wetherbeei_contig5424.1.3 ID=prot_P-wetherbeei_contig5424.1.3|Name=mRNA_P-wetherbeei_contig5424.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=554bp
ATSSLHDLPELEPEIRNPKNRKLANRKRNAGAMLGRIEMEGDAPLAFDDP
NKRNLVAEVSAKAPKVYGKGNGVRVLAVDCGIKNNIIRMLVKKGAEVTVV
PWDHDLSGDLANYDGLFLSNGPGDPTMCVETISQLQKILALAPEKSTPIF
GICLGNQLLGLAAGAKATKLPFGNRGQNQPVLNRATGECYITPQNHGYAI
EDATLPKGWRTLFSNVNDGTNEGIAHESRPYFTAQFHPEAQGGPTDTEFL
FDVFLRHATEAKSGKKGVAAGPVRFPPPRPQPVRLEMKKVLLLGSGGLSI
GQAGEFDYSGSQAIKALKEEGVEVVLMNPNIASVQTNMDDKSPHKADQVF
FLPVNPAFVEQVIKRERPDGIVVSMGGQTALNCAVEMYLAGTLDKYNVKV
LGTPIQSIINTEDRDVFNAKLAEIGEKIAPSKAVEGLEEAVKAAYGIGFP
VMIRSAYALGGLGSGICNDEAELRDMGRKALSLSSQILVEKSLRGWKEVE
YEVVRDAADNCITVCNMENFDPLGVHTGDSIVIAPSQTLSNTEYHMLRET
ALKV
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mRNA from alignment at P-wetherbeei_contig5424:470..3788-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5424.1.3 ID=mRNA_P-wetherbeei_contig5424.1.3|Name=mRNA_P-wetherbeei_contig5424.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3319bp|location=Sequence derived from alignment at P-wetherbeei_contig5424:470..3788- (Phaeothamnion wetherbeei SAG_119_79)
GCAACCTCGTCGCTGCATGATCTGCCGGAACTGGAACCGGAAATCCGGAA
TCCGAAAAATCGGAAACTGGCAAACCGGAAACGGAATGCAGGCGCGATGC
TGGGGCGCATCGAGATGGAGGGCGACGCGCCGCTGGCGTTCGACGACCCG
AATAAGCGCAACCTGGTGGCGGAGGTGTCGGCAAAGGCGCCGAAGGTGTA
CGGCAAGGGGAACGGGGTGCGTGTGCTGGCGGTGGACTGCGGCATCAAGA
ACAACATCATTCGCATGCTCGTCAAGAAGGGTGCAGAGGTGCGTCGTCGT
TTTATGCAGCTTTTTCTCTTTGCTCTCGCGGGGAAGGATGAATGGAAGGG
TCAACTTTTTTTCCTTTGCTTTCGCGGGGAATGATGGACGGAAGGGTCAG
ACATTTGTTGGTTAAGAACTAAATGTTCTCCTTCTGTCGTTTTGAACTTT
ATCTTCCTGTTTGTTGCTTGTCGCTTTATGTTTGAGTTTAATTTGTTTGC
TTCGCAGCTACTTCAGCCGATGTTTGTCGCCTGCCGAACCTCTTTTGTTG
TTTTCTCTTTTCTTTTCCTTTGACATCCTGCTTCAATTCAAGAAACTGCT
TTACTTCCACGATAAGAGTTGCGACAGATGTTGGTCTCGAATGTTTCTAG
AGTGAGGTCGATAAGTAGCTCATACTCAGCGTTCTGTTCTGTTCTATTCT
GTTCATTTCCTTCCGACATGTGCGGGGCTGCATTTGCAGGTGACGGTGGT
GCCGTGGGACCACGACCTGAGCGGCGACCTTGCCAACTACGACGGGCTTT
TTCTCAGCAACGGCCCGGGCGACCCGACCATGTGCGTCGAGACCATCTCC
CAGCTCCAGAAAATTCTGGCGCTGGCGCCGGAAAAGTCCACGCCCATCTT
CGGCATCTGCCTGGGCAACCAGCTGCTGGGCCTGGCGGCGGGCGCGAAGG
CCACGAAGCTGCCATTCGGCAACCGCGGCCAGAACCAGCCGGTGCTGAAC
CGCGCGACAGGCGAGTGCTACATCACGCCGCAGAACCACGGCTACGCCAT
CGAGGATGCCACGCTGCCGAAGGGCTGGCGAACGCTCTTCTCCAACGTGA
ATGACGGCACTAATGAGGGCATCGCCCACGAGTCGCGACCGTATTTCACG
GCGCAGTTCCACCCCGAGGCGCAGGGCGGCCCGACGGACACTGAGTTCCT
CTTCGACGTATTCCTGCGGCACGCGACGGAGGCCAAGTCGGGCAAGAAGG
GCGTGGCGGCGGGTCCGGTCAGGTTCCCGCCGCCGCGGCCGCAGCCCGTG
CGGCTCGAGATGAAGAAAGTGCGGTGGCGGGTTTAGGGATGAAGGATTAG
TCGCTTGGTTGCTGTTTTTGACATTCGGTTTAGAGGAGGAACGGACCGTA
TGGCTGTTGATTGGGCTTGGCAGGTTGCTAGTGGTTTGTGGAAGGCTTGA
GAATAATGGAAACCTTCTGCATCTACTGTTTTCAACCGTATCTTAGCTAA
TTCCTTTCCTCCTCCTTCCATCCTGCCGTGTCGTACCCTTTCGACCCCAC
TCCGGCCATTACTCAACTATTGACACGTTGGCGGCGGCAACGGCGGCGGC
GGCGATGGTGGCGAATTGATGGCTGCACTGCGCCCCATGCCACTGTGCGA
TGCGAATGCGATGCGGCTGCATGTGATCAGGTACTGCTGCTGGGATCGGG
CGGCCTGAGCATCGGGCAGGCGGGGGAGTTCGACTACTCGGGGTCGCAGG
CCATCAAGGCGCTCAAGGAGGAGGGCGTCGAGGTGGTGCTCATGAATCCC
AACATCGCTTCGGTGCAGACCAACATGGATGACAAGTCGCCCCACAAGGC
AGACCAGGTTAGTGCGGTCAGGCAGTTTGCGGAGAATGAGGCGGTCTGAG
GAGGTGGTTGTCGCAGTTGGGTTCTGTTGGAATCTGACTCGTCTGAAAGT
GTGTGAGAGTGTTTTCCTCGGGTTTCCAGGCCGGCTGGCATTACCGTGGC
AGTCGCAGCGGCAGGTTTGGATGCAGCAATCACTCTCTGGTAGCAGAAAG
CCCTGCCTCTGCCACCCTGCTGCTCGTCTCGCGTTCTTGTCCTCACATTC
CGGCCCTCACCGCTACCCCACTGCCACTGCCGCCACCGCAAACGCTGCCC
CCACCGCCGCTGCCCGTCCGTCTCTTTGCCTTCGTTGCCCACTTCTCCGT
CCCAACCGAACCAATGGAACGGGGCACACTCTGCGTTCCGGCGCCCGTAG
GTGTTTTTCCTGCCGGTGAACCCAGCCTTCGTGGAGCAGGTCATCAAGCG
CGAGCGGCCCGACGGCATCGTGGTGAGCATGGGCGGGCAGACGGCCCTCA
ATTGCGCTGTCGAGATGTACCTGGCGGGCACGCTGGACAAGTACAATGTC
AAGGTGCTGGGCACGCCCATCCAGAGCATCATCAACACGGAGGACCGCGA
CGTCTTCAACGCCAAGCTGGCCGAGATCGGTGAAAAGATCGCCCCGTCCA
AGGTGACGGAAAGAAGCAGGCAGTTCTTGTTCAATGTGTTGCGTTTCCGT
TTCCAGTGTTAGACAACGGGAATCATTTGATGGTCACCCCATTCCTGTTT
TGATCCCCGTCTCCTTGCGGCTGCCGCCGTCGCTGACGTTCATCAATGTC
GTCATAATCATTTGCGGCAGGCGGTGGAGGGCCTGGAGGAGGCGGTGAAG
GCGGCGTACGGGATCGGTTTCCCGGTGATGATCCGGTCGGCCTACGCGCT
CGGCGGGCTCGGTTCGGGCATCTGCAACGATGAGGCCGAGCTTCGGGACA
TGGGCCGTAAGGCGCTCTCCCTCAGGTCAGTCATCCATCTGTAATTGGCT
TGGCGGGGCCGATGGCGTTTCTAGTAGAGCCGCTTTCTGGATGTGTTGAA
GCGCCTGTTCGAAGTTTCTCGGATTTCGACTCCGTGGTATTTCAGCGGCG
TGTGTCTCTCCACCCCTGGCGTCTCAAACGTGAATCCAATCTAAACCTGG
CTGGTTCGATTCCACCCTCTTTTGCTCCCGCTATCAACCCCAACTCGCCT
TTTAACCGCGAAACATCAAAACCGTAAAAAACGGCAATATAACGGCACAC
GAAAACAGCTCTCAGATCCTGGTGGAGAAGTCGCTGCGGGGCTGGAAAGA
GGTGGAGTACGAGGTGGTGCGCGACGCCGCCGACAACTGCATCACCGTGT
GCAACATGGAGAACTTCGACCCGCTCGGCGTGCACACGGGCGACAGCATC
GTCATTGCGCCCAGCCAGACCCTCTCCAACACCGAGTACCACATGCTGCG
GGAGACGGCGCTGAAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5424:470..3788-

>mRNA_P-wetherbeei_contig5424.1.3 ID=mRNA_P-wetherbeei_contig5424.1.3|Name=mRNA_P-wetherbeei_contig5424.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1662bp|location=Sequence derived from alignment at P-wetherbeei_contig5424:470..3788- (Phaeothamnion wetherbeei SAG_119_79)
GCAACCTCGTCGCTGCATGATCTGCCGGAACTGGAACCGGAAATCCGGAA
TCCGAAAAATCGGAAACTGGCAAACCGGAAACGGAATGCAGGCGCGATGC
TGGGGCGCATCGAGATGGAGGGCGACGCGCCGCTGGCGTTCGACGACCCG
AATAAGCGCAACCTGGTGGCGGAGGTGTCGGCAAAGGCGCCGAAGGTGTA
CGGCAAGGGGAACGGGGTGCGTGTGCTGGCGGTGGACTGCGGCATCAAGA
ACAACATCATTCGCATGCTCGTCAAGAAGGGTGCAGAGGTGACGGTGGTG
CCGTGGGACCACGACCTGAGCGGCGACCTTGCCAACTACGACGGGCTTTT
TCTCAGCAACGGCCCGGGCGACCCGACCATGTGCGTCGAGACCATCTCCC
AGCTCCAGAAAATTCTGGCGCTGGCGCCGGAAAAGTCCACGCCCATCTTC
GGCATCTGCCTGGGCAACCAGCTGCTGGGCCTGGCGGCGGGCGCGAAGGC
CACGAAGCTGCCATTCGGCAACCGCGGCCAGAACCAGCCGGTGCTGAACC
GCGCGACAGGCGAGTGCTACATCACGCCGCAGAACCACGGCTACGCCATC
GAGGATGCCACGCTGCCGAAGGGCTGGCGAACGCTCTTCTCCAACGTGAA
TGACGGCACTAATGAGGGCATCGCCCACGAGTCGCGACCGTATTTCACGG
CGCAGTTCCACCCCGAGGCGCAGGGCGGCCCGACGGACACTGAGTTCCTC
TTCGACGTATTCCTGCGGCACGCGACGGAGGCCAAGTCGGGCAAGAAGGG
CGTGGCGGCGGGTCCGGTCAGGTTCCCGCCGCCGCGGCCGCAGCCCGTGC
GGCTCGAGATGAAGAAAGTACTGCTGCTGGGATCGGGCGGCCTGAGCATC
GGGCAGGCGGGGGAGTTCGACTACTCGGGGTCGCAGGCCATCAAGGCGCT
CAAGGAGGAGGGCGTCGAGGTGGTGCTCATGAATCCCAACATCGCTTCGG
TGCAGACCAACATGGATGACAAGTCGCCCCACAAGGCAGACCAGGTGTTT
TTCCTGCCGGTGAACCCAGCCTTCGTGGAGCAGGTCATCAAGCGCGAGCG
GCCCGACGGCATCGTGGTGAGCATGGGCGGGCAGACGGCCCTCAATTGCG
CTGTCGAGATGTACCTGGCGGGCACGCTGGACAAGTACAATGTCAAGGTG
CTGGGCACGCCCATCCAGAGCATCATCAACACGGAGGACCGCGACGTCTT
CAACGCCAAGCTGGCCGAGATCGGTGAAAAGATCGCCCCGTCCAAGGCGG
TGGAGGGCCTGGAGGAGGCGGTGAAGGCGGCGTACGGGATCGGTTTCCCG
GTGATGATCCGGTCGGCCTACGCGCTCGGCGGGCTCGGTTCGGGCATCTG
CAACGATGAGGCCGAGCTTCGGGACATGGGCCGTAAGGCGCTCTCCCTCA
GCTCTCAGATCCTGGTGGAGAAGTCGCTGCGGGGCTGGAAAGAGGTGGAG
TACGAGGTGGTGCGCGACGCCGCCGACAACTGCATCACCGTGTGCAACAT
GGAGAACTTCGACCCGCTCGGCGTGCACACGGGCGACAGCATCGTCATTG
CGCCCAGCCAGACCCTCTCCAACACCGAGTACCACATGCTGCGGGAGACG
GCGCTGAAGGTG
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