mRNA_P-wetherbeei_contig5416.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: A0A1X7SKD3_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SKD3_AMPQE) HSP 1 Score: 81.6 bits (200), Expect = 1.120e-16 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 2
Query: 263 EEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 514
+E+K FQ P++ H+ +DPL WW+ + FP IA++AR LCVPATSVPSER+FS+AGL + +R LT + + LIFL
Sbjct: 58 DELKLFQIEPQI----HHD--SDPLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFL 135
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: A0A8M2B8W1_DANRE (zinc finger BED domain-containing protein 4 isoform X3 n=2 Tax=Danio rerio TaxID=7955 RepID=A0A8M2B8W1_DANRE) HSP 1 Score: 81.3 bits (199), Expect = 1.690e-15 Identity = 38/85 (44.71%), Postives = 60/85 (70.59%), Query Frame = 2
Query: 263 EEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFLR 517
EEV ++++P L ++ +PL WW+ + +FP++AKLA+C L VPATSVPSER+FS+AG VT +R L+ +V+ ++FL+
Sbjct: 172 EEVACYRQVPTLPVE------LNPLAWWKDNESQFPHVAKLAKCYLGVPATSVPSERVFSTAGDIVTAQRSSLSSENVDIMVFLK 250
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: UPI0007B8209D (zinc finger BED domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8209D) HSP 1 Score: 79.0 bits (193), Expect = 2.600e-15 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 2
Query: 332 PLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 514
P WW+ + + FP +AKLAR LC+PATSVPSER+FS+AGLTVT+ R RLT V LIFL
Sbjct: 107 PTDWWKVNGIRFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTPDHVNMLIFL 167
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: UPI000B4580AC (zinc finger BED domain-containing protein 1-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B4580AC) HSP 1 Score: 82.4 bits (202), Expect = 3.650e-15 Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 2
Query: 257 AMEEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFLR 517
A +EV ++ + L M DPL WW+ H L+FP ++ +A+C LC+PATSVPSER+FS+AG VT +R +L+ V+ LIFL+
Sbjct: 566 ASDEVACYKEMELLPMDQ------DPLNWWKMHELQFPLLSLIAKCRLCIPATSVPSERIFSTAGDIVTAQRSQLSPDVVDKLIFLK 646
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: UPI0010A08E72 (zinc finger BED domain-containing protein 1-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI0010A08E72) HSP 1 Score: 82.0 bits (201), Expect = 4.490e-15 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 2
Query: 257 AMEEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 514
A EE+K + P LS+ + DPL WWR FP +AKLA+C LC+P TSV +ER+FS+AG VT +R LT V+ L+FL
Sbjct: 399 AEEEMKKYLETPSLSLSE------DPLTWWRSQETVFPLLAKLAKCYLCIPGTSVAAERVFSTAGDIVTAQRSMLTPEHVDQLLFL 478
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: A0A1X7T780_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T780_AMPQE) HSP 1 Score: 81.6 bits (200), Expect = 6.620e-15 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 2
Query: 263 EEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 514
+E+K FQ P++ H+ +DPL WW+ + FP IA++AR LCVPATSVPSER+FS+AGL + +R LT + + LIFL
Sbjct: 511 DELKLFQIEPQI----HHD--SDPLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFL 588
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: UPI001E1DF359 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF359) HSP 1 Score: 80.9 bits (198), Expect = 1.170e-14 Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 2
Query: 248 ELVAMEEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFLR 517
EL ME ++ ++ P +S+ D+ PL WW++ L FP ++KLA+C+LC+PATSVPSER+FS+AG +T +R L V+ LIFL+
Sbjct: 428 ELAQMEVIQ-YKSEPPVSLNDN------PLQWWKQRELRFPFLSKLAKCLLCIPATSVPSERVFSTAGDILTAQRASLKAKHVDKLIFLK 510
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: UPI001E1D160A (zinc finger BED domain-containing protein 4-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D160A) HSP 1 Score: 79.3 bits (194), Expect = 1.470e-14 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 2
Query: 257 AMEEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 514
A+ E++ + PR+S + DPL WW++ FPN++K+A+ +LCVPATSVPSERLFS AG ++QR+ L D +V ++FL
Sbjct: 211 AIIELRRYFEEPRISRIE------DPLSWWKKKAPIFPNLSKVAKRILCVPATSVPSERLFSKAGELISQRQSTLKDKNVNMILFL 290
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: UPI0014901E5B (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014901E5B) HSP 1 Score: 76.3 bits (186), Expect = 1.520e-14 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 2
Query: 329 DPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 514
DPL+WWR+H + FP +AKLA+ LCVPATS PSER+FS++G VT +R L V+ L+FL
Sbjct: 79 DPLVWWRQHEVNFPLVAKLAKKYLCVPATSSPSERVFSASGNIVTCKRSCLKPERVDQLVFL 140
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Match: A0A1A8IFU3_NOTKU (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8IFU3_NOTKU) HSP 1 Score: 75.1 bits (183), Expect = 1.780e-14 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 2
Query: 254 VAMEEVKAFQRIPRLSMQDHNGEWNDPLLWWRRHHLEFPNIAKLARCVLCVPATSVPSERLFSSAGLTVTQRRGRLTDHSVETLIFLR 517
VA EE+ ++ + + D+ PL WW+ HH +P+++KLA C L VP TSVPSER+FS+AG VT R L+ V+ LIFL+
Sbjct: 22 VADEEINLYRLAGCIHIDDN------PLRWWKEHHSLYPHLSKLALCYLVVPGTSVPSERVFSTAGDIVTASRSVLSAEHVDILIFLK 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5416.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5416.3.1 >prot_P-wetherbeei_contig5416.3.1 ID=prot_P-wetherbeei_contig5416.3.1|Name=mRNA_P-wetherbeei_contig5416.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp MAAAEEESSSNSMSCCDETDAAAASGRFELVAMEEVKAFQRIPRLSMQDHback to top mRNA from alignment at P-wetherbeei_contig5416:3180..3696- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5416.3.1 ID=mRNA_P-wetherbeei_contig5416.3.1|Name=mRNA_P-wetherbeei_contig5416.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=517bp|location=Sequence derived from alignment at P-wetherbeei_contig5416:3180..3696- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5416:3180..3696- >mRNA_P-wetherbeei_contig5416.3.1 ID=mRNA_P-wetherbeei_contig5416.3.1|Name=mRNA_P-wetherbeei_contig5416.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig5416:3180..3696- (Phaeothamnion wetherbeei SAG_119_79)back to top |