mRNA_P-wetherbeei_contig5415.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A835QAH0_VANPL (Uncharacterized protein n=3 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QAH0_VANPL) HSP 1 Score: 71.6 bits (174), Expect = 1.100e-9 Identity = 64/200 (32.00%), Postives = 97/200 (48.50%), Query Frame = 1
Query: 355 PRQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALG--IGLTGAEPNSWKMWVHLVLTAVCI-FSLFYFVKDSPLAKDYDYAVTICGMSFGIVFFTLYD-----GGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEELAEVSRLVG 930
PR+ R +L+V L + + S+F YV + L T W V+TV VV E TA ++ KG RV+ T++ GALG L G + S + V + L A + FS F + YDY TI ++F +V + Y G + H R ++ +GVA A + P A +EL++L+A + + LA VG
Sbjct: 48 PRRVRHSLKVGLTLTVISVFYYVKALYSGLGQS--TMWAVLTVVVVTEYTAGATLYKGLNRVIATLLAGALGLGAHRLAALAGNDGKSVLLGVFVFLLAAMVTFSRFV----PEIKARYDYGATIFILTFSLVSVSGYRVEELIGLAHH----RLSTVAIGVAACMATSIAIFPVWAGEELHNLVASNLDTLASFLEGVG 237
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: UPI00098E37B3 (aluminum-activated malate transporter 12-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E37B3) HSP 1 Score: 59.7 bits (143), Expect = 2.030e-6 Identity = 50/188 (26.60%), Postives = 94/188 (50.00%), Query Frame = 1
Query: 358 RQARFALRVTLCVLLASIFAYVPSAVDVLHGKL--DTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGIGLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSP-LAKDYDYAVTICGMSFGIVFFT-LYDGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEELA 909
R+ A +V L ++L S+ ++V+H +L + W V+TV V+ E TA ++ KG RV+GT++GG LGF++ G + + + + C S +++ P + K +DY I +++ +V + + +A+ R SI +G A+ + + P DEL++ +A + LA
Sbjct: 47 RKLFHAAKVGLALVLVSLL----YMLEVVHDRLGDNAMWAVMTVVVIFESTAGATISKGINRVLGTMLGGGLGFSVAFLAQGISGAGKAVVIGISVFVFC--STATYIRMIPSIKKKHDYGAMIFILTYSLVAVSGVRSNQIIKIASDRLSSIFIGFAVCIFISLFIFPIWCGDELHNSLASKFDNLA 228
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A8K0GVM4_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GVM4_9ROSA) HSP 1 Score: 61.2 bits (147), Expect = 2.260e-6 Identity = 57/191 (29.84%), Postives = 94/191 (49.21%), Query Frame = 1
Query: 355 PRQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALG-----FALGIGLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKD-YDYAVTICGMSFGIVFFTLY-DGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEEL 906
PR +L+V + + L S+F Y D + ++ W V+TV VV E + ++ KG R++ T++ GAL FA G G EP +V + FV+ PL K YDY + I ++F +V + Y D G +A +R +I++G IA V + P ++L++L+A + E+L
Sbjct: 46 PRTIIHSLKVAVALTLVSLFYYYQPLYD--NFGVNAIWAVLTVVVVFEFSVGATLGKGFNRMLATLLAGALAIGGHHFATLFGERG-EPILISTFVFIAAAITT------FVRFFPLMKARYDYGLIIFILTFSLVSVSAYRDDGVVDIARSRLSTIIIGSCIAIFVCIFIFPVWIGEDLHNLVAANMEKL 227
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A6J1HBH2_CUCMO (aluminum-activated malate transporter 2-like n=2 Tax=Cucurbita TaxID=3660 RepID=A0A6J1HBH2_CUCMO) HSP 1 Score: 60.5 bits (145), Expect = 3.610e-6 Identity = 59/189 (31.22%), Postives = 91/189 (48.15%), Query Frame = 1
Query: 355 PRQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGI--GLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKD-YDYAVTICGMSFGIVFFTLY-DGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEELA 909
PR+ +++V L + LAS F Y D W +ITV VV E + ++ KG R++ TI+GGALGF L G + + LV I S F++ P K YDY + I ++F +V + Y D +A+ R +IV+G IA ++ V P ++L+D + + E LA
Sbjct: 44 PRRIIHSIKVALAITLASFFYYFKPLYDSFGAS--AIWAIITVIVVFEFSVGATIGKGLNRMIATILGGALGFGTHYLANLCGDKGQPLILGA-LVFVVAAIAS---FMRFFPSMKARYDYGLLIFILTFSMVAVSSYRDDEVLKLASDRFLTIVIGSFIAVSICIFVCPIWIGNDLHDQLVNNVENLA 226
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A5P1FAB1_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FAB1_ASPOF) HSP 1 Score: 59.7 bits (143), Expect = 5.980e-6 Identity = 50/188 (26.60%), Postives = 94/188 (50.00%), Query Frame = 1
Query: 358 RQARFALRVTLCVLLASIFAYVPSAVDVLHGKL--DTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGIGLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSP-LAKDYDYAVTICGMSFGIVFFT-LYDGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEELA 909
R+ A +V L ++L S+ ++V+H +L + W V+TV V+ E TA ++ KG RV+GT++GG LGF++ G + + + + C S +++ P + K +DY I +++ +V + + +A+ R SI +G A+ + + P DEL++ +A + LA
Sbjct: 47 RKLFHAAKVGLALVLVSLL----YMLEVVHDRLGDNAMWAVMTVVVIFESTAGATISKGINRVLGTMLGGGLGFSVAFLAQGISGAGKAVVIGISVFVFC--STATYIRMIPSIKKKHDYGAMIFILTYSLVAVSGVRSNQIIKIASDRLSSIFIGFAVCIFISLFIFPIWCGDELHNSLASKFDNLA 228
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A7N0RFZ8_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RFZ8_KALFE) HSP 1 Score: 58.2 bits (139), Expect = 2.160e-5 Identity = 54/186 (29.03%), Postives = 88/186 (47.31%), Query Frame = 1
Query: 355 PRQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGIGLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKD-YDYAVTICGMSFGIVFFTLY-DGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEEL 906
PR+ +L+V L + L S F Y + G W V+TV V+ E T E++ KG R++ T+V G LG LG P + L + I F F++ P K YDY ++I ++F +V + Y + +A R +IV+G + A V V P ++ +L+A + ++L
Sbjct: 52 PRKVIHSLKVGLALTLISSFYYFQPLYEGFGGS--AIWAVMTVVVMFEYTVGETLGKGLNRMLATLVAGMLG--LGAHRLATLPGDSGQPIMLSMFVFLIAVTFTFMRFFPKLKARYDYGLSIFILTFSLVTVSAYREAAPLTIAHQRLSTIVIGCSTAVFVCIFVSPVWIGEDFKNLIADNIQKL 233
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A660KLQ7_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A660KLQ7_9ROSI) HSP 1 Score: 57.4 bits (137), Expect = 3.470e-5 Identity = 53/192 (27.60%), Postives = 93/192 (48.44%), Query Frame = 1
Query: 355 PRQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGI-----GLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKD-YDYAVTICGMSFGIVFFTLY--DGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEEL 906
PR+ +L+V L + L S+F Y+ D ++ W V+TV +V E + ++ KG R++ T++ GALG + G TG +P +V L+ V F + P K YDY + I ++F ++ + Y +G +A R +I++G A + + P + LN+L+A + E+L
Sbjct: 48 PRRITHSLKVALAITLVSLFYYIRPLYDGFGA--NSIWAVLTVILVCEFSVGATLGKGLNRMLATLLAGALGVGVHFLATMSGETG-QPIILGFFVFLIAATVT------FARFIPAMKARYDYGLMIFILTFSLISVSSYRENGEVIEMAHQRLTTIIIGSFTAIVICICIRPVWIGENLNNLVANNMEKL 230
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A6J1JC53_CUCMA (aluminum-activated malate transporter 2-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JC53_CUCMA) HSP 1 Score: 57.0 bits (136), Expect = 4.890e-5 Identity = 56/189 (29.63%), Postives = 89/189 (47.09%), Query Frame = 1
Query: 358 RQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFAL----GIGLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKDYDYAVTICGMSFGIVFFTLY-DGGSRHVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEELA 909
R+ AL+V L + L S+F Y D T W V+TV VV E + ++ +G RV+ T++ GALGF +G P ++V VL A+ F F+ + YDY + I ++F +V + Y D +A +R +I++G V V P A +L+ L+A + + LA
Sbjct: 48 RRVVHALKVGLAITLVSLFYYFKPLYD--GFGTSTIWAVVTVVVVFEFSVGGTLGRGLNRVMATLLAGALGFGAHYLASLGGDTGRPIMLGLFVF-VLAAISTFIRFF----PKMKARYDYGLLIFILTFCMVSLSGYRDDEIAKLAYSRMLTILIGCCFTVFVCVFVCPVWAGTDLHHLVASNIDSLA 229
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: UPI0016431C88 (FUSC family protein n=1 Tax=Nocardioides sp. zg-1228 TaxID=2763008 RepID=UPI0016431C88) HSP 1 Score: 57.4 bits (137), Expect = 5.530e-5 Identity = 53/178 (29.78%), Postives = 84/178 (47.19%), Query Frame = 1
Query: 430 AVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGIGLTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKDYDYAVTICGMSFGIVFFTLYDGGSRHVAAA---RACSIVLGVAIAAAVGGLVLPSSAEDELNDLMAFSCEEL-----AEVSRLVGSYA 939
AV L W V+ + V T E+++KGAQR+ GT+ G A+GFA+ + +G++P V L + AV +F+ Y+ + SP + + ++F LY+ R + A R V G +A AV LVLP + +A E++ A +SRL G +A
Sbjct: 827 AVGELVSSSHQYWAVLAAYQVLGGTDGETLVKGAQRLAGTVGGAAIGFAIALE-SGSDPA-----VVLPVLAVAVFASAYYRQVSP---------ALTALWTTMIFAMLYEYLGRLTSLALEERVLETVFGALVALAVAALVLPRHTRTHYHANLAALVEDVDVIVTASLSRLAGDHA 989
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Match: A0A443N3C3_9MAGN (Aluminum-activated malate transporter n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443N3C3_9MAGN) HSP 1 Score: 56.6 bits (135), Expect = 7.300e-5 Identity = 50/181 (27.62%), Postives = 92/181 (50.83%), Query Frame = 1
Query: 358 RQARFALRVTLCVLLASIFAYVPSAVDVLHGKLDTTWIVITVFVVQEKTAVESMLKGAQRVVGTIVGGALGFALGIG----LTGAEPNSWKMWVHLVLTAVCIFSLFYFVKDSPLAKDYDYAVTICGMSFGIVFFTLYDGGSR-HVAAARACSIVLGVAIAAAVGGLVLPSSAEDELNDLM 885
R+A F+ ++ L + + S+ + + D + W +ITV +V E + E++ +G R +GT++GG G ALGI LTG + ++L+ L F+K P K Y+Y I +++ I+ + Y+ H+A AR+ I LG +++ V + P + +EL++L+
Sbjct: 57 RKAIFSAKMGLALTVISLLIFWKDS-DTDTSRYSV-WAIITVPLVFEFSIGETLNRGLNRALGTMIGG--GLALGIAELSILTGRFEE-----LFILLSIFIAGFLATFMKFYPTLKPYEYGFRIFMLTYSIIMVSCYETREFIHMAVARSLLIALGASVSLVVNICIYPIWSGEELHNLV 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5415.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5415.1.1 >prot_P-wetherbeei_contig5415.1.1 ID=prot_P-wetherbeei_contig5415.1.1|Name=mRNA_P-wetherbeei_contig5415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=385bp MAAATSPLPSTSAKGRAPLWKPRQARFALRVTLCVLLASIFAYVPSAVDVback to top mRNA from alignment at P-wetherbeei_contig5415:177..2682- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5415.1.1 ID=mRNA_P-wetherbeei_contig5415.1.1|Name=mRNA_P-wetherbeei_contig5415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2506bp|location=Sequence derived from alignment at P-wetherbeei_contig5415:177..2682- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5415:177..2682- >mRNA_P-wetherbeei_contig5415.1.1 ID=mRNA_P-wetherbeei_contig5415.1.1|Name=mRNA_P-wetherbeei_contig5415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1155bp|location=Sequence derived from alignment at P-wetherbeei_contig5415:177..2682- (Phaeothamnion wetherbeei SAG_119_79)back to top |