mRNA_P-wetherbeei_contig5411.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI) HSP 1 Score: 630 bits (1624), Expect = 1.930e-220 Identity = 367/549 (66.85%), Postives = 430/549 (78.32%), Query Frame = 1
Query: 1 QVVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPA-------KGMKLAGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMHPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGDES--LTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRPMELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLIN 1620
QVVLSA+ITT+NGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETE+VRYVYQPIE LFLLLVTNKASNIVEDLETLR+LSKVVPDVAGG TED+V K+FELVFAFDEVITTGGHKE+I+LQQI+TNMEMDSHEERLH MIQ+SKREAAK+EA RRAKELRE+ KE L G+G G XXXXXXXXXXXX G XXXXXXXXXX SVPA+ P A++ P +GMKL GASK K +LDSLI E+ L IP+ + A T ++HPV+L VEE+LSCQL+REG LE +E+KG+LS+TAN++GA CKV+LA D S TF THPKVNK +YD+ + LA KD AKGFPV RPVGVLRWSL+TTDES +PLTINCWPE EGGG MNV++EY+L RPMELHDVRI IPLG+ A PEIA+ DG+ RH ++ TL+W +DL+D+SN +GSLEFN+ SRD EAFFPI+V F+S LF VQV GV +TE ++P+Q+GY+ASL+ADSY ++
Sbjct: 15 QVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEAQLRGSGMGXXXXXXXXXXXXXXSGSSMYTEASDYGVASTGGTXXXXXXXXXXASLGL---SVPAAGP--ASSTPVADTRVSTQGMKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGTFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTGSLEFNIASRDAEAFFPITVTFASNQLFCDVQVAGVTNTETESPIQYGYTASLTADSYTVS 558
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA) HSP 1 Score: 555 bits (1431), Expect = 1.880e-191 Identity = 338/548 (61.68%), Postives = 398/548 (72.63%), Query Frame = 1
Query: 1 QVVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAKGMKLA-GASKYKG---VLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMHPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGDE---SLTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRR-PMELHDVRIVIPLGTQAAP-EIASADG-APRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYL 1614
QVVLSAAITTKNGKALLARQ+VDMSRIRIEGLLAAFPKLMGTGNKQHTFIET+SVRY+YQP+ETLFLLL+TNK SNIVEDLETLR+LSKVVPDVAGG ED+V+ + FELVFAFDEV+T GG +E+I+L Q++ N+EMDSHEERLHNMIQESKREAA+DEA R+A+E+R+RQK + G + M XXXXXXXXXXXXXXXX XX P A KGMKL G KG +LDSL+AEEKLAP+P GA A A++PV+LV+EEKLS L+REG LEQLE+KG+LS+TAN EGA CK++LA G L F THPKVN+ALYDA R LALKDA KGFPV RPVGVLRWSL+T+DE+A PLT+NCWPE+EG G + V++EY L R ELHDV I +PLG AAP + SADG A RH+ LVW L+LID SNASGSLEF VQSRD E FFPI + F+S L+A +QV GV S + +AP+ FG +SL+ +SY+
Sbjct: 10 QVVLSAAITTKNGKALLARQYVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDSVRYIYQPMETLFLLLITNKGSNIVEDLETLRMLSKVVPDVAGGVAEDKVAARCFELVFAFDEVLTAGGMRETIALPQVKVNLEMDSHEERLHNMIQESKREAARDEAARKAQEMRQRQKALQAAGGSA---------------MAGXXXXXXXXXXXXXXXXAADPYGYGTRTAAPAXXXXXXXXXXPSRAT----KGMKLGLGGGTAKGRNAMLDSLMAEEKLAPVPAAAAGGAPAVLPEVTAAATAAAVYPVSLVMEEKLSAHLTREGTLEQLEVKGTLSLTANDEGASRCKIVLAAGGPVPAGLAFQTHPKVNRALYDASRALALKDAGKGFPVGRPVGVLRWSLATSDEAAAPLTVNCWPEDEGNGSVAVSLEYALGRGARELHDVVISVPLGGAAAPPRVTSADGGAYRHDAAAGALVWRLELIDNSNASGSLEFTVQSRDTEGFFPIQMQFTSSLLYAQLQVGGVVSIDAEAPIPFGMVSSLTTESYV 538
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN) HSP 1 Score: 496 bits (1277), Expect = 1.630e-168 Identity = 283/543 (52.12%), Postives = 373/543 (68.69%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGT---GSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAKGMKLAGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMHPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLA--GGDESLTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRPMELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLI 1617
VVLSA++ TKNG+ L ARQFV+M+R+R+EGLLAAFPKLMGTGNKQHTFIET+SVRYV+QP+E+++LLL+TNKASNIVEDLETLRLLSKVVP++AGG +E+++S KAF+LVFAFDEVITTGG++E+I L+QIRTN+EMDSHEE+LHNM++++K ++AKD+A +K ++ RQ+E + G G GG MG PA P K MKL G ++D + AE+ ++ P P A+ XXXXXXXXXXA P++L+VEEKL+ LS+EGALE +LKG+LS+TAN EGA CKV +A TF HPKV+K ++A + +KDA+KGFPV RPVGV+RWSLSTTDE+ +PLTINCWPE+EG GVMNVN+EY+L+RPMEL+DV I IP G APEI S DG+ H+ K+ L W LD++D SN G+LEFN+ +RD + FFPI+V F S +L+ + V + + DAP+ + + +L+ DS+ I
Sbjct: 2 VVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTGNKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQIRTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREASKSGDDPYGGGGGDFGGGMGMPAPPMGGESPYGESPY--------------------------GAPAPPPEPVVQ--VKSMKLGGKKNKSSLMDKMAAEDGISIAPAF-TPSKPASXXXXXXXXXXXAAQPISLIVEEKLTVALSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAAPGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELKRPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQGTLEFNINARDADDFFPIAVTFRSKSLYYDAPIASVTAIDGDAPVAYSLNKALTVDSFRI 514
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA) HSP 1 Score: 497 bits (1280), Expect = 1.680e-168 Identity = 289/552 (52.36%), Postives = 364/552 (65.94%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGN-KQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMA---LLGTGSG-GXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAKGMKLAGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMH--PVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGDE-----SLTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLR-RPMELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTEN-DAPMQFGYSASLSADSYLI 1617
VVLS AI TKNGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G KQHTFIET++VRYVYQPI+ LFLLL+TNKASNIVEDLETLRLLSK+VPDVAGG TE+RVS K FELVFAFDEV+TTGG++ES++LQQI+TNMEMDSHEE+L MI++SK ++AKD+A R+AK ++ER +E+A L T SG G +G S + +KGMKL SK +LDSL+ E+ L+ I P +A A + P+ L VEEK+ L+R+GA++ E+KGSL++TA E A KV LA G L F THPKVNK YD+ RVL LKD +KGFPV R VGVLRWS S+TD+S +P+T+NCWPEEEG G MN++IEYQ+ + ELH+V + IPLGT PE+AS DG RH+P++ L+WH+DL+D SN+SG+LEF V RD + FFPI V FSS L+A V V V E+ AP+ + + LS DSY++
Sbjct: 2 VVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETDTVRYVYQPIDNLFLLLITNKASNIVEDLETLRLLSKIVPDVAGGVTEERVSDKCFELVFAFDEVLTTGGYRESVTLQQIKTNMEMDSHEEKLALMIKQSKMDSAKDQAARQAKAIKERLRELARDRLGATRSGLGGAYQGIGGGGMDYVGGSGAFDGQAGIGQDAFGASTPSVYAPSTVDSFTVSKTETVKTV-------SKGMKLGAPSKAASMLDSLVQEDNLSNIAATRAPPLSAGAGLGEEAVSAPVIQHQPIQLAVEEKIVAHLTRDGAIDTFEVKGSLTLTATTEAAALSKVALAAGGARPVPAGLNFQTHPKVNKQEYDSNRVLVLKDTSKGFPVGRAVGVLRWSYSSTDDSVVPITLNCWPEEEGQGKMNISIEYQMNGQSQELHNVNVSIPLGTAEPPEVASIDGTYRHDPREQRLIWHMDLVDASNSSGALEFVVAGRDAQVFFPIIVSFSSQILYADVNVTAVTGLEDGSAPIPYSLTKLLSPDSYIV 546
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA) HSP 1 Score: 487 bits (1254), Expect = 7.840e-165 Identity = 270/540 (50.00%), Postives = 362/540 (67.04%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAKGMKLAGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMHPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGDESL-TFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRPMELHDVRIVIPLGTQAAPEIASAD-GAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLI 1617
VVLSAA+ TKNG+ALLARQ+VDM+RIRIEGLLAAFPKLMGTG++QHTF+ET+SVRYVYQPIETL+LL++TNKASNIVEDLETLRLLSK+VP++A G TE+++ K FELVFAFDEV+T GGH+ESI++ QI+ N+ M+SHEE+LH MI+ESK + K+EA RRAK ++E+Q+ G SGG G G + P + P A KGMKL G+SK + ++D ++E+ LAP+ G + A A HPV+L++EEK++ ++REGALE +E+KG++++ AN + CKV+LAG L T+ THPKV+K Y+ + +L LKD KGFP + +G+LRWS++T D+S +P++INCWPE+E G MNVN+E+ MELH+V+I IPLGT PEI S D G+ +HN + L+W ++LID N + SLEFNV D +AFFPISV F S +L AG+ V + S+ENDAP+QFG + L DSY +
Sbjct: 2 VVLSAAVCTKNGRALLARQYVDMTRIRIEGLLAAFPKLMGTGSQQHTFLETDSVRYVYQPIETLYLLVITNKASNIVEDLETLRLLSKLVPEIAEGVTEEKILDKMFELVFAFDEVLTPGGHRESITMPQIQVNLSMESHEEKLHKMIEESKVSSTKEEADRRAKTIKEQQRSSKAGGMSSGGMAGM--------GGGGDSMAESVPETDYTTRPFSELSSGQQTSTSSEWGYSQSPKADPEPVTA--KKGMKLGGSSKKQQIMDKFVSEDNLAPLSAKGN-DTSGKAMTPATAAAPVATHPVSLLLEEKVAVTMNREGALELMEIKGTMALVANGDEFSKCKVILAGAKNPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKTSSLEFNVAQDDADAFFPISVSFGSTHLKAGLDVANILSSENDAPIQFGLAKMLVTDSYQV 528
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA) HSP 1 Score: 483 bits (1244), Expect = 3.550e-163 Identity = 283/553 (51.18%), Postives = 368/553 (66.55%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQ-HTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAG---GTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAG----PAKGMKL--AGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMHPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLL---AGGDESLTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLR-RPMELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLIN 1620
VVLSAA+ TK GKAL+ARQFVD+SRIRIEG+LAAFPKLMGT KQ HTF+ETE+VRYVYQ ++ L+LLL+TN+ASNIVEDLETLRLLSKV+P+VAG TE+ V+ K+FEL+FA DEVITTGG++E I+LQQIRTNMEM+SHEE+LHNMI+ SK E+AKD+A A+ ++++QKE +G GG G +AS P S +A+++ P KGM L AGA K K V D+L+ E+KLAP+ + + + + A PVTL + EK+S LSREG +E E+KGSL++TA + A C V L + D +F THPKVNKA Y+ +L LK+A KGFP RPVG+L+W+ S T E +PL INCWPEEE G MNV+IEY + + +ELHDVRIVIPLGT AAP I S DG+ +HN LVW +DLID SN +GSLEFNVQ R +AFFPI VHF+S L++GV+V+ V++ + AP+ +G + ++S++ Y+IN
Sbjct: 8 VVLSAAVCTKGGKALVARQFVDVSRIRIEGMLAAFPKLMGTDAKQQHTFVETEAVRYVYQLLDNLYLLLITNRASNIVEDLETLRLLSKVIPNVAGVMTNLTEEHVADKSFELMFALDEVITTGGYREPINLQQIRTNMEMESHEEKLHNMIKISKMESAKDQASVAARAIKDKQKEQMRMGASGGGMVGIGSNSRSEFGASGFDSSAHSGSSFADPVP-----------------AASSPVSTAQASSSSRARQPVKGMSLNPAGA-KNKSVEDALMREDKLAPLISASK---NSVSDAPTPLTAAVAQQPVTLSIVEKVSATLSREGLVEMFEIKGSLTLTAADDEAALCSVQLKPASARDSVFSFNTHPKVNKAAYEKTGLLQLKEANKGFPSARPVGILKWTHSGTSEELVPLKINCWPEEESRGQMNVSIEYSMDVKGLELHDVRIVIPLGTNAAPTIVSVDGSHKHNASSGELVWTIDLIDASNTTGSLEFNVQQRSADAFFPIGVHFASPKLYSGVEVVSVNAGGSGAPVVYGLTKNMSSEEYVIN 539
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A7S3ZRB7_9STRA (Coatomer subunit delta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRB7_9STRA) HSP 1 Score: 454 bits (1168), Expect = 6.670e-152 Identity = 283/542 (52.21%), Postives = 367/542 (67.71%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAKGMKLAGASKYK-GVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMHPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGDESL--TFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRP-MELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLI 1617
V+LSAA+TTKNG+ALL+RQFVDM+R+R+EGLLAAFPKL GTGNKQHTF+ET+SVRYVYQP+E++FLLL+TNKASNIVEDLETLRLLSKVVP++AGGT+ED+VS AFELVFAFDEVITTGG++E+I ++ IR N++MDSHEE+L NM+++SK +AAKD+A ++ +++RQ++ G G GG GMG XXXXXXXXXXXXXX PA P +GMKL K K ++ + AE+ L ++ + A XXXXXX P+ L VEEKL+ LS+EGALE +LKG+LS+TAN + A C++ +A + TFATHPKV+K +++ ++ +K AKGFPV R VGV+RW+LSTTDE +PLTINCWPE+EG G MNVNIEY R MEL+DV I IP G + PEI S DG +H+ + L W LD ID N +G+LEFN+ +D AFFPI V F S +L+ V + V STE + + ++ DS+ I
Sbjct: 2 VILSAAVTTKNGRALLSRQFVDMNRLRVEGLLAAFPKLQGTGNKQHTFVETDSVRYVYQPVESIFLLLITNKASNIVEDLETLRLLSKVVPEIAGGTSEDKVSDHAFELVFAFDEVITTGGYRETIDMRTIRQNLDMDSHEEKLANMVKKSKLDAAKDQAKHMSQVIKQRQRDAMKTGMGGGGPMA---------GMGGGDMDEDDEYNXXXXXXXXXXXXXXFMDAYAN------PAPPPEPEPIIQVQGMKLGKKKKGKVDLMSKMAAEDGLDVRASMPQ---EEIADAPXXXXXXATSQPIALSVEEKLTISLSQEGALEAFDLKGTLSLTANDDVAAACRLTVAHKTAAAGTTFATHPKVDKKAWESDGIVQMKGNAKGFPVGRAVGVVRWALSTTDEQQVPLTINCWPEDEGDGQMNVNIEYTAARSGMELYDVSIKIP-GCASNPEIVSVDGTHQHDARSEILDWQLDCIDSGNPTGTLEFNIAQKDEGAFFPIEVSFRSKSLYYDVPISSVESTEGHGSIGYSLDKKVTVDSFRI 524
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A7S2RJQ4_9STRA (Coatomer subunit delta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ4_9STRA) HSP 1 Score: 455 bits (1171), Expect = 6.890e-152 Identity = 277/560 (49.46%), Postives = 364/560 (65.00%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG--NKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPA----------KGMKLAGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAM-------HPVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGDESL-TFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRP-MELHDVRIVIPLGTQAAPEIASAD-GAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLI 1617
VVLSA++ TKNGKAL+ARQFV MSRIRIEGLLAAFPKL+G+ N QHTFIET+SVRYVYQPIE LFLL++TNKASNIVEDLETLRLLSK+VP+ GG TED+++ K F+L+FAFDEVITTGGH+ESI+LQQI+ N+ M+SHEE+LH MI++SK +AK+EA R+AK L+E++++ L G S M A +P+SA + P KGM+L G SK + ++D L+ E+ L P+P+ AA+TAXXXXXXXXXX HP+ +++EEK++ L+REGA+E LE KG++ +T+N A C+V++ L + T+PKV+K Y+ + +ALKDA+KGFP + VGVLRWS +T D+ +P++INCWPEE+G MNVN+EY + RP +ELH+V IVIPLGT A+P + S D G RHN LVW ++LID SN S SLEF+V R +AFFPI V F+S L AGV V + E P+ F S A+SY +
Sbjct: 20 VVLSASVCTKNGKALVARQFVGMSRIRIEGLLAAFPKLVGSEAKNTQHTFIETDSVRYVYQPIENLFLLIITNKASNIVEDLETLRLLSKLVPETCGGLTEDKITDKMFDLIFAFDEVITTGGHRESITLQQIQVNVSMESHEEKLHKMIEQSKVSSAKEEADRKAKALQEQRRQDKLSGATS---------------MSGIEGGSTGEDTFAERHMSSGGFSSAPPGSAMYADHAPLPSSASYGGVSSPTSRRDEPVLPKKGMQLGGGSKKQQLMDKLVTEDNLTPLPS-----AASTAXXXXXXXXXXVATPAVEVTHPINILLEEKITGALNREGAVESLETKGTMFLTSNTAEACRCQVIMTPAKNPLFAYQTNPKVDKKAYEQEHRIALKDASKGFPQGKGVGVLRWSAATQDDEHVPISINCWPEEDGAD-MNVNVEYSVDRPGLELHNVSIVIPLGTSASPNVLSVDSGTHRHNRSSEELVWEIELIDESNKSASLEFSVPQRSSDAFFPIQVRFASNQLSAGVDVANITDLEGK-PIHFSLQKSAVAESYKV 557
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A3M6VEB6_9STRA (Coatomer subunit delta n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEB6_9STRA) HSP 1 Score: 430 bits (1105), Expect = 3.100e-142 Identity = 249/540 (46.11%), Postives = 338/540 (62.59%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAKGMKLAGASKYKGVLDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMH-PVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLL-AGGDESLTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRPMELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLI 1617
VVLSA++ T+NGKA RQFV+++RIR+EGLLAAFPKL+ +G+++HTFI+TESVRYVYQP+E+ F+L++TNK SNIVEDL T++LL+K+VPD+ +E + K FELVF FDE+IT GGH E+I++QQIR NMEM+SHEE+LHNMI ESKR AAKD+ R ++E Q+E A + G A + ++G +KGM L S K +D++ AE+ L IP P +AA H P+ +VVEEK++ L+R+GA EQLE+KGS+ V+ N A C++ L GG E ++F THPKV+K LYD++ VLAL+D++K FP R V LRWSL T DES +PL I CWPEEEG G +NV++EY L R M L +V IVIPLG AP +A+ DG +HN + +L+WH D I +N SG+LEF++ + +AFFPISV F S ++++ VQV V E+ +P+ FG+ LS DSY I
Sbjct: 7 VVLSASLLTRNGKA---RQFVEITRIRLEGLLAAFPKLLSSGSREHTFIDTESVRYVYQPLESFFVLIITNKTSNIVEDLHTIQLLAKLVPDICAPLSETSIRDKQFELVFGFDELITAGGHSENINVQQIRINMEMESHEEKLHNMILESKRAAAKDDMKRHTARIKEEQRERARMERAGLGGSGFGSKSSFGSSFSNAFKSPRSGGSSDNFMNSPSSVATSPTSYNSRPEPIMSKAGGMKLGSSGSSKGMGLG--SGGKSFMDAMAAEDGLKEIP----PMSAAVEIVQKPEVAVAVSHDPIGIVVEEKMTVVLTRDGAPEQLEVKGSMCVSVNDPSAGCCRLKLRTGGVEGISFQTHPKVDKKLYDSESVLALRDSSKPFPTSR-VAFLRWSLKTQDESMVPLNITCWPEEEGNGKINVSVEYSLDRDMVLDNVNIVIPLGGSDAPSVANVDGQYQHNSAEGSLLWHQDQITPANNSGTLEFSIGGNNIDAFFPISVSFFSRSVYSDVQVETVEKIEDGSPIVFGFEKLLSTDSYEI 536
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Match: A0A0P1AVH5_PLAHL (Coatomer subunit delta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVH5_PLAHL) HSP 1 Score: 427 bits (1098), Expect = 3.290e-141 Identity = 252/555 (45.41%), Postives = 339/555 (61.08%), Query Frame = 1
Query: 4 VVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETESVRYVYQPIETLFLLLVTNKASNIVEDLETLRLLSKVVPDVAGGTTEDRVSGKAFELVFAFDEVITTGGHKESISLQQIRTNMEMDSHEERLHNMIQESKREAAKDEALRRAKELRERQKEMALLGTGSGGXXXXXXXXXXXXGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVPASAPRAAAAGPAK------GMKLAGASKYKGV---------LDSLIAEEKLAPIPTVGRPGAAATAXXXXXXXXXXAMH-PVTLVVEEKLSCQLSREGALEQLELKGSLSVTANAEGAVHCKVLLAGGD-ESLTFATHPKVNKALYDAQRVLALKDAAKGFPVQRPVGVLRWSLSTTDESALPLTINCWPEEEGGGVMNVNIEYQLRRPMELHDVRIVIPLGTQAAPEIASADGAPRHNPKDSTLVWHLDLIDRSNASGSLEFNVQSRDREAFFPISVHFSSGNLFAGVQVLGVHSTENDAPMQFGYSASLSADSYLI 1617
VVLSA++ T+NGK L+ARQFV+++RIR+EGLLAAFPKL+ +G ++HTFI+TESVRYVYQP+E F+L++TNK SNIVEDL ++LL+K+VPD+ +E + K FELVF FDE++T GGH E+I++ QIR NMEM+SHEE+LHNMI ESKR AAKD+ R ++E Q+E A L GMG S S A++P + + PA GMKL +S +G+ +D++ AE+ L IP P +A H P+ VVEEK++ ++R+GALEQLE+KGS+ V+ N A C++ L G+ E ++F THPKV+K LYD VLAL+D +K FP R V LRWSL T DES LPL I CWPEEEG G MNV++EY L R M L +V I+IPLG AP +A+ DG +HN + +L+WH D I +N SG+LEF ++ +AFFPISV F S ++++ VQV V E+ + + FG+ LS DSY I
Sbjct: 2 VVLSASLLTRNGKVLVARQFVEITRIRLEGLLAAFPKLLSSGTREHTFIDTESVRYVYQPLENFFVLIITNKTSNIVEDLHIIQLLAKLVPDICAPLSETSIRDKQFELVFGFDELVTAGGHSENINVSQIRMNMEMESHEEKLHNMILESKRAAAKDDMKRHTARIKEEQRERARL---------------ERAGMGGSGSGLHSSFGSSFSSKFKSPRSDNKSSFMSSPRSPS--ATSPTSYNSRPAPVVSKGAGMKLGTSSSGQGMGLGSGGKSFMDAMAAEDGLKEIP----PMSAVVETVQKPEIAVAVSHDPIGAVVEEKITVVITRDGALEQLEVKGSMYVSVNDPSAGCCRLKLRTGEIEGISFQTHPKVDKRLYDKDSVLALRDPSKPFPTSR-VAFLRWSLKTQDESMLPLNITCWPEEEGDGKMNVSVEYSLDRDMVLDNVNIIIPLGGHDAPSVANVDGQYQHNSAEGSLLWHHDQISSANNSGTLEFTIRGNHLDAFFPISVSFFSRSVYSDVQVEAVEKVEDGSSIAFGFEKLLSTDSYQI 534 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5411.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5411.1.1 >prot_P-wetherbeei_contig5411.1.1 ID=prot_P-wetherbeei_contig5411.1.1|Name=mRNA_P-wetherbeei_contig5411.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=541bp QVVLSAAITTKNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIback to top mRNA from alignment at P-wetherbeei_contig5411:962..3227+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5411.1.1 ID=mRNA_P-wetherbeei_contig5411.1.1|Name=mRNA_P-wetherbeei_contig5411.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2266bp|location=Sequence derived from alignment at P-wetherbeei_contig5411:962..3227+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5411:962..3227+ >mRNA_P-wetherbeei_contig5411.1.1 ID=mRNA_P-wetherbeei_contig5411.1.1|Name=mRNA_P-wetherbeei_contig5411.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1623bp|location=Sequence derived from alignment at P-wetherbeei_contig5411:962..3227+ (Phaeothamnion wetherbeei SAG_119_79)back to top |