mRNA_P-wetherbeei_contig54041.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A3C2B3L3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B3L3_9ACTN) HSP 1 Score: 194 bits (494), Expect = 5.560e-58 Identity = 104/142 (73.24%), Postives = 121/142 (85.21%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLN-DEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
GL RLLK+V+VVA +GTAGA+LLGPFVI+KFYDSELSG TLA LA SA+YM ALALAQAVIALRGH LVA GWA+AG+ FLLVTWLN +DLFRRVE+GLV+SS AAL+AFA ALRHRL GV P+ S+++A+TDMP E
Sbjct: 290 GLKRLLKVVVVVAAIGTAGAYLLGPFVIEKFYDSELSGSTLAVLAFGSALYMLALALAQAVIALRGHALVALGWATAGVTFLLVTWLNGSDDLFRRVEIGLVSSSAAALLAFALALRHRLASGVEPSTHSVIDAITDMPFET 431
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A6L6BHG2_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6L6BHG2_9ACTN) HSP 1 Score: 169 bits (427), Expect = 6.370e-48 Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
G +LL +V+ V GT GAF +GPF+I+K Y +EL RT+A LA+ SA+YM ALALAQAVIALRGH LV GW S + F+LVTWL+ +DLFRR+E GLVASS AALV+F ALRH+LR GV PT S+M+A+TDMP E+
Sbjct: 302 GFRKLLVLVVAVGAAGTVGAFAVGPFIIRKMYGAELHARTMAMLAVGSAIYMLALALAQAVIALRGHALVGIGWGSGMVTFVLVTWLSSDDLFRRIEYGLVASSAAALVSFWIALRHKLRTGVEPTHGSMMDAITDMPFES 442
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A7W1CLE8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CLE8_9ACTN) HSP 1 Score: 167 bits (423), Expect = 2.290e-47 Identity = 88/141 (62.41%), Postives = 110/141 (78.01%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
GL L+ +V V VVGT GAF+LGPFVI+ YD++LSGRTLA LAL SA YM ALALAQAVIAL+GH LV+ GW + + FLL TWL+ +DLF+RVE+GL+ SSVAA+ FA LR++L GVVP +S+M+A+TDMPLE
Sbjct: 298 GLKLLMMVVAAVGVVGTVGAFVLGPFVIEIVYDADLSGRTLAMLALGSACYMVALALAQAVIALKGHALVSLGWITGVVAFLLATWLSSDDLFKRVEIGLLTSSVAAMTTFAITLRYKLASGVVPDTDSMMDAITDMPLET 438
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A4R7I1I7_9ACTN (O-antigen/teichoic acid export membrane protein n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7I1I7_9ACTN) HSP 1 Score: 166 bits (419), Expect = 9.500e-47 Identity = 86/141 (60.99%), Postives = 110/141 (78.01%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
GL +L+ +V V VVGTAGAF++GPFVI+ YD+ELSGRTLA LALSSA+YM LA AQAVIAL+GH VA GW+ ++F+L TWL+ + LFRR+E+GLV SS +AL FAFALR +L G PT +S+M+A+TDMP+E
Sbjct: 301 GLRKLMYLVAAVGVVGTAGAFIIGPFVIETVYDTELSGRTLAMLALSSAIYMAGLATAQAVIALQGHKWVALGWSVGVVMFVLGTWLSSDLLFRRIEIGLVISSASALAIFAFALRQKLSSGATPTSDSVMDAITDMPVEG 441
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A6C7EAZ4_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EAZ4_ILUCY) HSP 1 Score: 166 bits (421), Expect = 9.680e-47 Identity = 87/141 (61.70%), Postives = 110/141 (78.01%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
GL +L+ +VL V V+GT+GAF+LGP I+ YD+EL+GRTLA LAL SA YM ALA AQAVIAL+GH LVA GW + F++VTWL ++LFRR+E+GL+ASSVAAL+ FA ALR RLR GV+P S+MEA+TD P E+
Sbjct: 338 GLKKLMYVVLAVGVIGTSGAFVLGPLAIEIVYDAELTGRTLAMLALGSACYMMALAFAQAVIALKGHALVAAGWGIGVVTFVVVTWLASDELFRRIEIGLLASSVAALITFAVALRSRLRSGVIPDQASVMEAITDQPFES 478
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A6N2DQQ8_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQQ8_9ACTN) HSP 1 Score: 164 bits (415), Expect = 2.480e-46 Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
G RL+ +V+VV GT GAFL+GP+VI Y ++L+GRTLA LAL+SA+YM ALA AQAVIALRGH VA GWAS F++VTWL+ + LFRR+E+GL+ASS+ ALV FA LR RLR GV P +S+M+A+TDMPLE+
Sbjct: 281 GFKRLIVLVIVVGATGTVGAFLIGPWVIDLVYGADLTGRTLAMLALASAIYMLALATAQAVIALRGHAYVAVGWASGFATFIVVTWLSSDLLFRRIEIGLLASSIVALVVFATTLRSRLRTGVEPDADSVMDAITDMPLES 421
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A7W0R0Z1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R0Z1_9ACTN) HSP 1 Score: 164 bits (414), Expect = 5.100e-46 Identity = 88/140 (62.86%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLE 420
GL RL+K+VL V V+GT GA +GP VI++ YD+ELSGRTLA LALSSA YM AL+ AQAVIAL+GH +VA GW+ F +VTWL ++LFRR+ELGLVASS+AA+ FA ALR+RL GV P S++EALTD PLE
Sbjct: 300 GLRRLMKVVLTVGVIGTVGALAVGPIVIERVYDAELSGRTLAMLALSSACYMVALSCAQAVIALKGHAMVALGWSIGFGTFCVVTWLAGDELFRRIELGLVASSLAAMTTFALALRNRLNAGVAPDRGSVLEALTDQPLE 439
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A7X9Q0F3_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9Q0F3_9ACTN) HSP 1 Score: 161 bits (408), Expect = 3.220e-45 Identity = 85/141 (60.28%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
G +L+ +VLVV G G++LLGPF+I+K YD+EL+ RTLA LAL SA+YM ALALAQAVIAL+GH LV GW F++VTWL+ +DLFRR+E GLVASS+ A+VAFA ALR++LR G PT S+MEA+ DMP E+
Sbjct: 290 GFRKLMYVVLVVGAGGVVGSYLLGPFIIRKMYDAELTSRTLAMLALGSALYMVALALAQAVIALKGHALVGVGWGLGMAGFIVVTWLSSDDLFRRIEYGLVASSMVAMVAFAVALRYKLRSGSEPTHASVMEAIIDMPFES 430
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A7Y1ZVA7_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZVA7_9ACTN) HSP 1 Score: 162 bits (409), Expect = 4.050e-45 Identity = 84/141 (59.57%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
GL RL+ +VL V VGT+GAF+LGP+ I+ YD+ LSGRTLA LA SSA YM ALA AQAVIAL+GH LVA GW + FLL TWL+ +++FRRVE+GL+ASS+ A+++F ALRH+L G VP +S+M+A+TDMP E+
Sbjct: 320 GLQRLMLVVLAVGAVGTSGAFVLGPWAIEVVYDASLSGRTLALLAFSSACYMVALATAQAVIALKGHALVALGWGVGVVAFLLGTWLSSDEVFRRVEIGLLASSIGAMLSFGLALRHKLVSGAVPDQDSLMDAITDMPFES 460
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Match: A0A848UL41_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UL41_9ACTN) HSP 1 Score: 156 bits (394), Expect = 1.090e-44 Identity = 80/141 (56.74%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 1 GLNRLLKMVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALAQAVIALRGHMLVAFGWASAGIIFLLVTWLNDEDLFRRVELGLVASSVAALVAFAFALRHRLRIGVVPTGESIMEALTDMPLEN 423
GL +L+ +V V ++GT GAFL+GPF I+ Y++ LSGRTLA LALSS YM LA AQAVIALRGH VA GW + ++F L TWL+ + LFRR+E+GL+ SS AL FA ALRH+L++G PT S+M+A+TDMP E+
Sbjct: 135 GLRKLMLLVSAVGIIGTLGAFLIGPFAIETVYNATLSGRTLAMLALSSGTYMAGLATAQAVIALRGHAFVAAGWGAGVVMFFLGTWLSSDLLFRRIEIGLLLSSCTALACFALALRHQLQVGAQPTSGSVMDAITDMPFES 275 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54041.1.1 >prot_P-wetherbeei_contig54041.1.1 ID=prot_P-wetherbeei_contig54041.1.1|Name=mRNA_P-wetherbeei_contig54041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp MVLVVAVVGTAGAFLLGPFVIKKFYDSELSGRTLATLALSSAVYMFALALback to top mRNA from alignment at P-wetherbeei_contig54041:1..426+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54041.1.1 ID=mRNA_P-wetherbeei_contig54041.1.1|Name=mRNA_P-wetherbeei_contig54041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig54041:1..426+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54041:1..426+ >mRNA_P-wetherbeei_contig54041.1.1 ID=mRNA_P-wetherbeei_contig54041.1.1|Name=mRNA_P-wetherbeei_contig54041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig54041:1..426+ (Phaeothamnion wetherbeei SAG_119_79)back to top |