mRNA_P-wetherbeei_contig5400.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5400.1.2
Unique NamemRNA_P-wetherbeei_contig5400.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A836CMS1_9STRA (Putative apoptosis-inducing factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS1_9STRA)

HSP 1 Score: 285 bits (730), Expect = 3.080e-89
Identity = 155/258 (60.08%), Postives = 188/258 (72.87%), Query Frame = 1
Query:    1 SSWADFDTLQYIQEALDCRHVAVIGGGFLGTEIALALSRRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRF----VVSGGSSXXXXXXXXXXXXXAQ-EGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSG-----KLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            SS  DF  L   +E L   H  V+GGGFLGTEIALALSRRG+KVSQVYAE APL R++PIYLAEY++++L +HG+EA+SERLVTDVR     ++S                  Q E L  DYVV+ASTH DP+TT+A+ SG+EIDP NGGIVVNG LEA+GG++AAGACASY+D  LGRRRVDMLDHS++SG      +AG  RV  TG  G      ++PR YMHQP FRSH E+LDIL+EGVGELDA+++TVGIWV
Sbjct:  278 SSLDDFQALNSARETLGIEHATVVGGGFLGTEIALALSRRGVKVSQVYAEIAPLSRQIPIYLAEYMRERLAEHGIEAVSERLVTDVRSDEDALMSDDEEENDDDRVDVEPSEKQGETLLTDYVVMASTHVDPVTTIARASGMEIDPSNGGIVVNGLLEAIGGVYAAGACASYHDPALGRRRVDMLDHSLNSGLRAGYNMAGGRRVPLTGHSG------NHPRLYMHQPTFRSHWEDLDILVEGVGELDASVRTVGIWV 529          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A836C7T6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T6_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.900e-66
Identity = 131/270 (48.52%), Postives = 174/270 (64.44%), Query Frame = 1
Query:    1 SSWADFDTLQYIQEALDCRHVAVIGGGFLGTEIALALSRRG-MKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGST-------GGK--GAAAAALH------------YPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            S   DF  L+ ++++   +HV VIGGGFLG+E+ALAL+RRG ++VSQVYAE AP+ R LP YLA ++Q++LQQ GVE I ERLVTD+RF V  GS               ++ L  DY+VLASTH +P   VA  SG+E+D   GG+VVNGQ EAV G++AAG  ASYYDA LGRRR+D  DHS++SG LAG +   +        GGK  GA   ++             +P  Y HQP+ RS L  +++ MEG+GE+DA L+TVG+W+
Sbjct:  446 SDLEDFQALESLKDSEHIKHVTVIGGGFLGSEVALALARRGGLRVSQVYAEVAPMQRLLPAYLAMHLQRRLQQEGVEPIRERLVTDLRFNVDKGS------VELVLQGWEKQALQTDYIVLASTHIEPRVGVATASGIEVDRDTGGVVVNGQFEAVAGVYAAGGVASYYDAALGRRRIDRYDHSVNSGLLAGYNMAAAVASARAQHGGKVDGAGVDSIGRREVDDSPPPGPFPCTYTHQPMLRSTLSGVEVCMEGLGEIDARLRTVGLWL 709          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: W7U6U0_9STRA (Apoptosis inducing factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6U0_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.830e-60
Identity = 119/248 (47.98%), Postives = 154/248 (62.10%), Query Frame = 1
Query:   13 DFDTLQYIQEALDCRHVAVIGGGFLGTEIALALSRRG----MKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            DF+ L  +   +  +HV+V+GGGFLGTE+ALAL+ RG    M VSQ+YAE  PLCR +P YL  +VQ+ L   GV  ++ERLVTDV+     G                +E +  DY VLA TH +P   VA +SGLE+D    GI VN QLEAVG +F AG  ASYYDA LGRRRV+M DHSI+SG LAG         K   A      R+Y HQP++RS L+++D++ + VGE+D+ + TVGIWV
Sbjct:  306 DFEQLDSLHNIMANKHVSVVGGGFLGTELALALAVRGRETGMTVSQIYAEKGPLCRYIPNYLGMHVQRLLHGAGVRYVNERLVTDVK----DGGDDAPGALRISLMGWNKENIYTDYAVLAPTHVEPCVDVAVKSGLELDANTNGIAVNQQLEAVGNVFVAGGVASYYDAALGRRRVEMFDHSINSGILAG---------KNMTADERRPKRRYTHQPMYRSLLKDIDVVCDVVGEIDSKMHTVGIWV 540          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A4D9D2E6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2E6_9STRA)

HSP 1 Score: 210 bits (534), Expect = 8.090e-60
Identity = 119/248 (47.98%), Postives = 154/248 (62.10%), Query Frame = 1
Query:   13 DFDTLQYIQEALDCRHVAVIGGGFLGTEIALALSRRG----MKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            DF+ L  +   +  +HV+V+GGGFLGTE+ALAL+ RG    M VSQ+YAE  PLCR +P YL  +VQ+ L   GV  ++ERLVTDV+     G                +E +  DY VLA TH +P   VA +SGLE+D    GI VN QLEAVG +F AG  ASYYDA LGRRRV+M DHSI+SG LAG         K   A      R+Y HQP++RS L+++D++ + VGE+D+ + TVGIWV
Sbjct:  370 DFEQLDSLHNIMANKHVSVVGGGFLGTELALALAVRGRETGMTVSQIYAEKGPLCRYIPNYLGMHVQRLLHGAGVRYVNERLVTDVK----DGGDDAPGALRISLMGWNKENIYTDYAVLAPTHVEPCVDVAVKSGLELDANTNGIAVNQQLEAVGNVFVAGGVASYYDAALGRRRVEMFDHSINSGILAG---------KNMTADERRPKRRYTHQPMYRSLLKDIDVVCDVVGEIDSKMHTVGIWV 604          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: K3WXL9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL9_GLOUD)

HSP 1 Score: 192 bits (488), Expect = 1.790e-54
Identity = 103/248 (41.53%), Postives = 155/248 (62.50%), Query Frame = 1
Query:   13 DFDTLQYIQEALDCRHVAVIGGGFLGTEIALALS----RRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            DF  L  + +  + + V VIGGGFLGTE+A AL+       +    V+ E+AP+ R LP YLA+ +  +LQ+ GV+ + + LVT ++     G +              +  L +DYVVLASTH DP     ++S LE+D +NGGI+VN QLEA+ G+F AG  ASYYD  LGRRRVD  DH+++SG +AG +   S       +++    + Y HQP+FRSHL+ +D+++EG+GE++++L+T+G+WV
Sbjct:  179 DFTQLDQLHKRPEIKSVTVIGGGFLGTEVATALATDPRNAELTTRLVFTESAPMSRSLPFYLAQELTTKLQRIGVDVVPDHLVTSLKCE---GDADECEGVIVEGLGKGKMKLHSDYVVLASTHTDPNFRFGRDSCLEVDDVNGGIMVNAQLEAISGLFVAGNAASYYDPYLGRRRVDRYDHAVNSGLVAGRNMAASL------SSSTGKMKNYRHQPMFRSHLQGIDVVIEGIGEINSSLRTIGLWV 417          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A7S2GEZ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEZ9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.840e-54
Identity = 115/259 (44.40%), Postives = 153/259 (59.07%), Query Frame = 1
Query:   10 ADFDTLQYIQEALDCRHVAVIGGGFLGTEIALALSRRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSG----------GSSXXXXXXXXXXXXXAQEGLAADYVVLASTH----ADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANL-KTVGIW 741
            +DF+ L+ I++ + C HV V+GGG LGTE++ AL+ RGM+VSQVYAE  PL R+LP YLA  VQ +L + GV  + ERLVT    VV            G                +  L  DY VLASTH     DP+   A  SGLEIDP NGGI+VN QLEA+  +F AG+ AS+YD  LGRRRVD  DH+++SG  AG +          +   L     Y HQP+FR+++  +D++ E VGE+D+ L +TVG+W
Sbjct:  185 SDFEQLESIRDIIGCGHVVVVGGGMLGTEVSSALASRGMRVSQVYAERVPLQRQLPYYLALEVQARLLKIGVRPMPERLVTAFDPVVDDPDDGASSIVEGEDAESGLMRLTVVGMERANLRCDYAVLASTHIDASVDPIDPQA--SGLEIDPKNGGIMVNAQLEALQNVFVAGSAASFYDTALGRRRVDRFDHAVNSGLAAGHNMTKEFANHDESLNML-----YTHQPMFRNYMPAIDVICEAVGEIDSTLFRTVGVW 436          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A2D4BL96_PYTIN (Apoptosis-inducing factor 1, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL96_PYTIN)

HSP 1 Score: 187 bits (474), Expect = 1.870e-52
Identity = 106/248 (42.74%), Postives = 149/248 (60.08%), Query Frame = 1
Query:   13 DFDTLQYIQEALDCRHVAVIGGGFLGTEIALALS----RRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            DF+ L  + +  D R V V+GGGFLGTE+A A++       +K   ++ E+AP  R LP YLA+ + ++L+  G+E I +RLVT V+     G S              +  L +DYVVLASTH  P     +++  EID  NGGIVVN QLEA+ G+F AG  ASYYD  +GRRRVD  DH+++SG  AG + V S    G     +   + Y HQP+FRS+L  +D+ +E +GE+D+++ TVGIWV
Sbjct:  183 DFEQLSGLGKRSDVRRVTVVGGGFLGTEVATAIATDPRNAHLKTQLIFVESAPESRSLPSYLAKELARKLEGVGIEVIPDRLVTSVKCE---GESVDQDGVTITALGNGKHKLVSDYVVLASTHTXPNLRFDRQTCFEIDDRNGGIVVNAQLEAMAGVFVAGNAASYYDPYIGRRRVDRYDHAVNSGLTAGLNMVASASPPG----MMSRMKLYRHQPMFRSNLPGIDVQIEAIGEIDSSMHTVGIWV 423          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A8K1C9S9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9S9_PYTOL)

HSP 1 Score: 185 bits (470), Expect = 2.020e-51
Identity = 102/248 (41.13%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   13 DFDTLQYIQEALDCRHVAVIGGGFLGTEIALALS----RRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWV 744
            DF+ L  + +  D + V ++GGGFLGTE+A AL+       +K   ++ EAAP  R LP YLA+ + ++L   G++ +++RLVT ++    G                 +  L +DYVVLASTH +P   + ++   E+D  +GGI VN QLEA+ G+F AG  ASYYD  LGRRRVD  DH+++SG LAG + V        A+ + ++ + Y HQPVFRS L+ +D+ +EG+GE+DA+  TVG+WV
Sbjct:  243 DFEQLDALSKRPDIKRVTIVGGGFLGTEVATALATDPRNAHLKTQLLFVEAAPGSRSLPSYLAKELARRLTSVGIDVVADRLVTSLKASTDGHDDCVAITAMGN----GKHKLKSDYVVLASTHTEPNLRLDRQHCFEVDDKHGGIKVNAQLEAMAGVFVAGNAASYYDPYLGRRRVDRYDHAVNSGLLAGRNMV--------ASGSTNHLKLYRHQPVFRSDLKGIDVQIEGIGEIDASFHTVGVWV 478          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: A0A3F2RH58_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH58_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.590e-50
Identity = 116/276 (42.03%), Postives = 155/276 (56.16%), Query Frame = 1
Query:   10 ADFDTLQYI-----QEALDCRHVAVIGGGFLGTEIALALS----RRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSXXXXXXXXXXXXXAQE----GLAADYVVLASTHADPLTTVAKE------SGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWVAAQPGGAGDNSG 780
            ADF  L  +     +E  D + V +IG GFLG+E+A AL+     + ++    + E  P+ R LP YLAE + ++L + GV+ +  RLVT +R   SG                 ++     L ADYVVLASTH DP TT+          GLE D  NGG+VVN QLEAV G+F AG  ASY+D  LGRRRVD  DH+++SG  AG +   S  G G         + Y HQP+FRSHL  L +L+EG+GE+D++L+TVG+WV     G G N G
Sbjct:  158 ADFVRLDQLAAGGSEEGGDIQSVLIIGAGFLGSEVACALATDPRNKHLRTKLAFVEQNPVARTLPPYLAEELARRLSRAGVDVVPNRLVTSLR--PSGDDDDNENDGGVTVGVLGKDKPEASLDADYVVLASTHTDPATTLRMGRPTRAGGGLERDEKNGGLVVNSQLEAVSGLFVAGNAASYFDPYLGRRRVDRYDHAVNSGLTAGRNMARSLHGAGKM-------KTYRHQPLFRSHLPGLGVLIEGIGEVDSSLRTVGVWVQPPNVGVGQNGG 424          
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Match: H3GYI8_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GYI8_PHYRM)

HSP 1 Score: 181 bits (458), Expect = 8.400e-50
Identity = 113/256 (44.14%), Postives = 145/256 (56.64%), Query Frame = 1
Query:   49 DCRHVAVIGGGFLGTEIALALS----RRGMKVSQVYAEAAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSG--GSSXXXXXXXXXXXXXAQEGLAADYVVLASTHADPLTTVAKE------SGLEIDPINGGIVVNGQLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGGKGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWVAAQPGGAGDNSG 780
            D   V VIG GFLG E+A AL+       +K   V+ E AP  R LP YLA+ + ++L + GVE + ++LVT +R  V      S              +  L ADYVVLASTH DP  T+          GLE D  NGG+VVN QLEAV G+F AG  ASYYD  LGRRRVD  DH+++SG  AG +   S  G G         + Y HQP+FRSHL  + +L+EG+GE+D++L+TVG+WV     G G N G
Sbjct:  222 DAHSVLVIGAGFLGCEVACALATDERNDHLKTKLVFVEQAPAARTLPPYLADELGRRLSRAGVEVVPDKLVTSLRPSVDDDDNESDSGVTVGVLGKDKPETALDADYVVLASTHTDPAPTLRMGRATRAGGGLERDEKNGGLVVNAQLEAVSGLFVAGNAASYYDPYLGRRRVDRYDHAVNSGLTAGRNMARSLRGAGKM-------KTYRHQPLFRSHLPGVGVLIEGIGEVDSSLRTVGVWVQPPNIGVGPNGG 470          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5400.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMS1_9STRA3.080e-8960.08Putative apoptosis-inducing factor 1 n=1 Tax=Tribo... [more]
A0A836C7T6_9STRA5.900e-6648.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U6U0_9STRA2.830e-6047.98Apoptosis inducing factor n=1 Tax=Nannochloropsis ... [more]
A0A4D9D2E6_9STRA8.090e-6047.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K3WXL9_GLOUD1.790e-5441.53Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2GEZ9_9STRA5.840e-5444.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2D4BL96_PYTIN1.870e-5242.74Apoptosis-inducing factor 1, putative n=1 Tax=Pyth... [more]
A0A8K1C9S9_PYTOL2.020e-5141.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RH58_9STRA2.590e-5042.03Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
H3GYI8_PHYRM8.400e-5044.14Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5400contigP-wetherbeei_contig5400:23..2182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog65071.PYU1_T009717
PFAMsAIF_C,Pyr_redox_2
Model size792
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.93e-55
EggNOG OGsCOG0446@1|root,KOG1346@2759|Eukaryota,1MGB4@121069|Pythiales
DescriptionApoptosis-inducing factor 1. Source PGD
Cds size792
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186807.2097104-CDS-P-wetherbeei_contig5400:22..2421683186807.2097104-CDS-P-wetherbeei_contig5400:22..242Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5400 23..242 -
1683186807.2201803-CDS-P-wetherbeei_contig5400:960..11971683186807.2201803-CDS-P-wetherbeei_contig5400:960..1197Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5400 961..1197 -
1683186807.229257-CDS-P-wetherbeei_contig5400:1548..17161683186807.229257-CDS-P-wetherbeei_contig5400:1548..1716Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5400 1549..1716 -
1683186807.237848-CDS-P-wetherbeei_contig5400:2015..21821683186807.237848-CDS-P-wetherbeei_contig5400:2015..2182Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5400 2016..2182 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5400.1.2prot_P-wetherbeei_contig5400.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5400 23..2182 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5400.1.2

>prot_P-wetherbeei_contig5400.1.2 ID=prot_P-wetherbeei_contig5400.1.2|Name=mRNA_P-wetherbeei_contig5400.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
SSWADFDTLQYIQEALDCRHVAVIGGGFLGTEIALALSRRGMKVSQVYAE
AAPLCRELPIYLAEYVQQQLQQHGVEAISERLVTDVRFVVSGGSSGDGGG
DGGGGGGGAQEGLAADYVVLASTHADPLTTVAKESGLEIDPINGGIVVNG
QLEAVGGIFAAGACASYYDATLGRRRVDMLDHSISSGKLAGCSRVGSTGG
KGAAAAALHYPRQYMHQPVFRSHLEELDILMEGVGELDANLKTVGIWVAA
QPGGAGDNSGGGAG
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mRNA from alignment at P-wetherbeei_contig5400:23..2182-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5400.1.2 ID=mRNA_P-wetherbeei_contig5400.1.2|Name=mRNA_P-wetherbeei_contig5400.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2160bp|location=Sequence derived from alignment at P-wetherbeei_contig5400:23..2182- (Phaeothamnion wetherbeei SAG_119_79)
AGCTCGTGGGCAGACTTCGACACGCTCCAGTACATCCAGGAGGCTCTCGA CTGTCGCCACGTTGCGGTCATCGGCGGGGGCTTTCTGGGAACGGAAATTG CACTGGCGCTCTCCCGGCGGGGCATGAAAGTGTCTCAGGTCTACGCCGAA GCTGCACCGCTGTGTCGGTGAGTAAATCGAGCGAAGGGAGAACCGGTGAT AGAGGTATCGTTTGCTATGGTTTTCGCAGTTGGAAGTCGGAAGTGTGGCA AATTGCGCGGCCTGGGACTTCAACCTGACGCAGAAGCATTTGAGCTGGCT CAGCATTGCGCGGAACTTCAACAAAGCTAATATTGAGGGGCAGTTGCTTG CCGCCGCCGCTCCCCGTCCGCGACAGCATGCATCGACGCAAGATTATCAT TCGTTTCGTTTTTTCACATACTTCTCGCTGCCGCCGCAATCCTCGCCCGT TTCGATGAATGAACAGGGAGCTGCCCATCTACCTGGCCGAGTACGTACAG CAGCAGTTGCAGCAGCACGGCGTCGAGGCCATCTCCGAGCGCCTTGTCAC CGACGTGCGCTTTGTGGTTAGCGGGGGAAGCAGCGGCGATGGCGGCGGCG ATGGCGGCGGCGGCGGCGGCGGGGCACAGGAGGGGTTAGAGAAAATCCAG CTCAGCCTCATGGGCTGGGCCAAGGACAGGTCCGTCTCGTGAGGCGTGGA ATGCGGGCAATCTGATCCGGTCTTGACCATGTCTAGTTTGCATCATTGCA GTCCGGCGTTGAAGGAACATGGATGGGTTGGTGTTTTTTTTGGTCCTCCC TGGTCTTCCGCTCGTCGCAGCAGCCATCGTCCCGCTTTTTGTTGGAGTAA ACCTTCTTTTTTTATTACATAGTGAAGGGTTGCGCGATGCCACTTTCAAT CCCCCGCAGCGGCCTCGCCGTCCTTAAATGTCCTTCCTCCCTCCGTATTT TTCGTCTTACCCGTCCCTCCCCGCAACGCCCTTAGGCTAGCGGCGGACTA TGTGGTGCTGGCGTCGACGCACGCCGACCCGCTGACGACGGTGGCAAAGG AGAGCGGGCTCGAGATCGACCCCATTAACGGCGGCATCGTCGTCAACGGT CAGCTCGAGGCCGTTGGTGGTATCTTCGCCGCGGGGGCGTGCGCCAGCTA CTACGATGCCACGCTCGGCCGCCGCCGCGTCGACATGCTCGACCACTCCA TCAGCAGCGGAAAGCTCGCCGGGTGAGGCATCCCGCCGGTCGGTCCGGTC AGCATGATGGTTGTGCCTCAGCAATTCTTAGTGGTCTCGATTACAACGCC GGACGCAAGGTTATTTGGTCTGGGTTTGCGCTTTAGGTCTTGCATTGTCA GCCGTTTCGTTCCGGTCGGTGTGGTCAGTCGGTCAGCCGGTGCGGTGGTG GTTTCTCGTCTCGTGATCGGTAGTTCTTCACCTTTTTTGCCAGTACATGT TCCCTCATTCTCCATCCTTCGATTCAGCTTCCAGAGCGATGTTTAACATC GATGGTGTTCCAGTTATCTGGTTTGCACTGCCACTAAGTCCCCACTGCGA TGCGTGCCGCAGGTACAACATGGCCGCCAGTACGTCGCGAAATCCGCTCT TCGACGCCGGATCGCAGGCTGCTCTGACGGAGCCGCCATCACCGCTGTCG CCGCGGGACAAGTCTGTTGTAATTTTTCTGACCTCGCCTCCTTTCTCGAC CACTGCTGTCTGTACATTGAGAGCCGGGTTATAGCCAGCCGTCTTTGACG TGCTCGCACATCTTTCGTCGTGTCTTTATGTGCTTATCCATCGTTCACTC TTACTACCCTGCAGTCAAAAGGCGGCGGCGGCAGCAGCTGCTTCACCGCG GTCGGCAGCTGCAGCGGGCGGCGGCACATCGAGCAGCGATCCCAGCAGCG CGACGGCTGTCGTGGGCGGTGCCAATGGCGGCAGCAGCAGCTGCAGCAGA GTCGGCAGCACCGGCGGCAAGGGCGCCGCGGCCGCGGCGTTGCATTACCC GCGGCAGTACATGCACCAGCCGGTCTTCCGCAGCCATCTGGAAGAGCTGG ATATTTTGATGGAGGGTGTGGGAGAACTTGATGCCAACCTCAAGACGGTG GGCATCTGGGTGGCGGCCCAACCGGGCGGCGCCGGCGACAATAGCGGCGG GGGCGCTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5400:23..2182-

>mRNA_P-wetherbeei_contig5400.1.2 ID=mRNA_P-wetherbeei_contig5400.1.2|Name=mRNA_P-wetherbeei_contig5400.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig5400:23..2182- (Phaeothamnion wetherbeei SAG_119_79)
AGCTCGTGGGCAGACTTCGACACGCTCCAGTACATCCAGGAGGCTCTCGA
CTGTCGCCACGTTGCGGTCATCGGCGGGGGCTTTCTGGGAACGGAAATTG
CACTGGCGCTCTCCCGGCGGGGCATGAAAGTGTCTCAGGTCTACGCCGAA
GCTGCACCGCTGTGTCGGGAGCTGCCCATCTACCTGGCCGAGTACGTACA
GCAGCAGTTGCAGCAGCACGGCGTCGAGGCCATCTCCGAGCGCCTTGTCA
CCGACGTGCGCTTTGTGGTTAGCGGGGGAAGCAGCGGCGATGGCGGCGGC
GATGGCGGCGGCGGCGGCGGCGGGGCACAGGAGGGGCTAGCGGCGGACTA
TGTGGTGCTGGCGTCGACGCACGCCGACCCGCTGACGACGGTGGCAAAGG
AGAGCGGGCTCGAGATCGACCCCATTAACGGCGGCATCGTCGTCAACGGT
CAGCTCGAGGCCGTTGGTGGTATCTTCGCCGCGGGGGCGTGCGCCAGCTA
CTACGATGCCACGCTCGGCCGCCGCCGCGTCGACATGCTCGACCACTCCA
TCAGCAGCGGAAAGCTCGCCGGCTGCAGCAGAGTCGGCAGCACCGGCGGC
AAGGGCGCCGCGGCCGCGGCGTTGCATTACCCGCGGCAGTACATGCACCA
GCCGGTCTTCCGCAGCCATCTGGAAGAGCTGGATATTTTGATGGAGGGTG
TGGGAGAACTTGATGCCAACCTCAAGACGGTGGGCATCTGGGTGGCGGCC
CAACCGGGCGGCGCCGGCGACAATAGCGGCGGGGGCGCTGGC
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