mRNA_P-wetherbeei_contig540.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig540.3.2
Unique NamemRNA_P-wetherbeei_contig540.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: D8LHK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK2_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.280e-70
Identity = 256/622 (41.16%), Postives = 311/622 (50.00%), Query Frame = 3 
Query:   27 MAGQGA-WVFYYLQGEDGESESNPNVFQVPNASRDVRLGQFMESFPLRRHGGQYHFRFRAPDPVSGYCWLELRDPSATLPRYDDMVCAKVLRLDRLPQPKPSRLRRK-PVKAVLLSRAQAPAMSPPAGINGGGATGFSTTPPRPPAPDSSSGPPSEPVRSQSGGALGAQRARSASPIPVPTSAXXXXRTTPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLNFDVPXXXXXXXXXXXXXXGAAEWASPVQTAPSSNGAPNS----GGGVGVGSAADLMSMGAAAAWGGP-----------TGGARSHT----------APNSPDRPGAGAY-GGRGPPGAXXXXXXXXMLXXXIGIXXXSV----------------------------------------------------GGQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQEL 1652
            MAG+G  WVFY+LQGEDG+S  NPN F +  A  +VRLGQF+++FPLR HGGQYHFRFRAPD VSGYCW+++ DPSA LPRY +++CAK LRLDRLP+P+ SRLRRK P  A   + +    +      +GG  + F+                             A R RSA   P                                 XXXXXXX                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX    + L  D P              G    +S  +   S++G+ NS     GG G  S  DL++ G  +  G P           T G RS            A  SP   GAG+  GG  P G   XXXXXX  XXX   XXX                                                      GGQSAYV    +ER+++L+ +  KAL+FKK ID AA ++Q+ +D AK K DA+LTSW EDHGKKRNVRTLLSTMHLVLWEG RW++ SM D+I P+KVK+++RKAML+VHPDKC   G E R IAKRVFEA+NEAY  F  +E+
Sbjct:    1 MAGKGGMWVFYFLQGEDGDSVENPNAFNIMGAVSEVRLGQFLQAFPLRGHGGQYHFRFRAPDQVSGYCWMDVSDPSAVLPRYGNVICAKALRLDRLPKPRSSRLRRKMPYAAGAATTSGGDHLR----ASGGANSRFTEE---------------------------AHRRRSAQDYP---------------------GNARHHGGQPQQXXXXXXXQQWSNQGRPRSVSPAHGHQIHHDDVNKGKSVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLEEFLFSDSPTGSPRASPRAQG--GGIAHSSTPRGGGSNSGSNNSKDREAGGEGR-SGEDLLNFGNDSGGGRPKQAPEPSPRPTTNGGRSPVPAGWGNRPAAARGSPVAGGAGSSNGGASPQGRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFLMNFNSPRAGGXXXXXXXGGQSAYVKTKVQEREEELKANVEKALEFKKGIDEAASKDQDAMDAAKVKHDAKLTSWAEDHGKKRNVRTLLSTMHLVLWEGNRWKSVSMGDIIQPSKVKLSYRKAMLLVHPDKCGSLGPEERLIAKRVFEAVNEAYTLFQEKEM 567
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: A0A835YJL8_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJL8_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.590e-54
Identity = 98/143 (68.53%), Postives = 118/143 (82.52%), Query Frame = 3 
Query: 1224 GQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQEL 1652
            G+SAYV A  EER+KK+EED  +A++FKKD DAA V+EQEE D AK K DA LT W EDHG+KRN+RTLL+TMH V+WEGC+WQ   M DL+ PNKVK+A+R+AMLVVHPDKC +  SE +FIAKRVFEALNEA+ATFAA E+
Sbjct:  314 GKSAYVAACMEEREKKIEEDMQRAVQFKKDRDAALVQEQEEFDAAKAKLDAALTGWAEDHGRKRNIRTLLTTMHAVVWEGCKWQQMGMGDLLAPNKVKMAYRRAMLVVHPDKCADETSEHKFIAKRVFEALNEAWATFAAAEM 456
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: A0A6H5JQN3_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN3_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.750e-46
Identity = 89/143 (62.24%), Postives = 113/143 (79.02%), Query Frame = 3 
Query: 1224 GQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQEL 1652
            GQSAYV    +ER+++L+ +  KAL+FKK ID AA ++Q+ +D AK K DA+LTSW +DHGKKRN+RTLLSTMHLVLWEG RW+  SM D+I P+KVK+++RKAML+VHPDKC   G E R IAKRVFEA+NEAY  F  +E+
Sbjct:  396 GQSAYVKTKVQEREEELKANVEKALEFKKGIDEAASKDQDAMDAAKVKHDAKLTSWAQDHGKKRNIRTLLSTMHLVLWEGNRWKPVSMGDIIQPSKVKLSYRKAMLLVHPDKCGSLGPEERLIAKRVFEAVNEAYTLFQEKEM 538
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: A0A7S3HR35_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR35_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.410e-30
Identity = 64/143 (44.76%), Postives = 94/143 (65.73%), Query Frame = 3 
Query: 1221 GGQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQE 1649
            GG +      K  +  K+     KAL+ K++ D    +EQ++ D A+ K DA+L +W  ++ ++RN+R+LLSTMH VLWEG RW+   + DL+ P +VK+ +RKAMLVVHPD  V   +E R+I+KR+FEA+NEAY  F  +E
Sbjct:  154 GGPTLSRAELKANKDDKINNQVQKALEEKQEQDRKKDQEQDDFDAARAKHDAKLLAWSTNNKERRNIRSLLSTMHTVLWEGTRWKTIGLGDLLEPKQVKLQYRKAMLVVHPDHNVHLTNENRYISKRIFEAVNEAYNEFTTKE 296
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: UPI000711C762 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711C762)

HSP 1 Score: 122 bits (307), Expect = 3.200e-27
Identity = 67/146 (45.89%), Postives = 99/146 (67.81%), Query Frame = 3 
Query: 1215 SVGGQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHG-KKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQE 1649
            S  G+S  V+AA + R+++L E   KAL  KK+ + A+  ++EE D AK K+  +L +W  D G +++N+RTLLSTMH V+W    ++  SMA L+ P+KVK+ +RKAML VHPDK     ++  +IA+R+FEALN A++TF  QE
Sbjct:  137 SYEGKSETVVAAMKAREEQLRERQIKALMEKKEREIASEVKEEERDAAKAKYGKQLNAWAYDMGGERKNIRTLLSTMHTVMWSEAEFKPISMAQLLDPDKVKLYYRKAMLRVHPDKVAGGTADQVYIAQRIFEALNNAWSTFQEQE 282
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: D8LVM2_BLAHO (J domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVM2_BLAHO)

HSP 1 Score: 111 bits (277), Expect = 7.830e-25
Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 
Query: 1260 RKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWG-EDHGKKRNVRTLLST------MHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQE 1649
            R+++L E   KAL  KK+ + AA  ++++   +K K+ A+L  W  E  G+K+N+RTLLST      MH V+WEG  +Q  S+A L+ P KVK+ +RKAML VHPDK  +   +  +IA+R+FEALN+A+ATF  Q+
Sbjct:    4 REQELREKQIKALLVKKEQEVAATVKEQQRQESKEKYQAKLDEWAMEKGGEKKNIRTLLSTVGIERGMHQVMWEGADFQPISLAQLLQPEKVKLYYRKAMLKVHPDKNRDGTPDQIYIAQRIFEALNQAWATFQDQQ 140
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: A0A196S8Y2_BLAHN (Auxilin-like protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S8Y2_BLAHN)

HSP 1 Score: 111 bits (278), Expect = 1.850e-24
Identity = 62/146 (42.47%), Postives = 92/146 (63.01%), Query Frame = 3 
Query: 1215 SVGGQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGED-HGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQE 1649
            S  G+S  V+ A ++R+K+L E   +AL  KK+ +      +E+ + AK  +  +L  W  D  G+K+N+RTLL+TMH VLWEG  ++   M+ L+ P  VK  +RKAML VHPDK  +   E  +IA+RVF+ALN+A+A F  Q+
Sbjct:   38 SYEGKSPEVVKAMKDREKQLREKQIRALMEKKEREITTAINEEKKEEAKKVYGKKLDDWSCDISGEKKNIRTLLTTMHTVLWEGANFKPILMSQLLTPENVKSCYRKAMLKVHPDKNRDGTPEQVYIAQRVFDALNQAWARFQEQQ 183
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: A0A7S2YLR4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLR4_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.150e-23
Identity = 54/138 (39.13%), Postives = 87/138 (63.04%), Query Frame = 3 
Query: 1224 GQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATF 1637
            G+SA+V  A  +R   ++    KAL+  ++ +A A +++EE D  + + + ++ +W E+HGKK+ +R LL T+H +LW G  W+  S+ D++  +KVK  + KA  VVHPDK     SE RF+AKR+F+AL +A   F
Sbjct:  201 GKSAHVAGAVNKRINDMKASQDKALREIREREAKASKDKEEEDEVRKRLEPKIKAWSEEHGKKKQLRALLGTLHTILWPGANWKPVSIGDMLDDSKVKKFYHKASRVVHPDKTHSLNSEQRFLAKRIFDALTQAKVDF 338
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: H3GVC8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVC8_PHYRM)

HSP 1 Score: 114 bits (285), Expect = 4.070e-23
Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 3 
Query: 1227 QSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATF 1637
            +S  V  A EER+++++ D  +A +  +  D AA       DTA T    RL +W ED+G+ +N+RTLLSTMH V+WE C+W   +M  LI PN VK  +RKAM+VVHPDK     +E   IA+RVF ALN A+  F
Sbjct:  333 KSEDVRRAMEERERQVQRDVERAREDLRKRDEAARNLSAMKDTANTVIGPRLKTWAEDNGRVKNIRTLLSTMHQVMWEDCKWTEVNMGKLIQPNDVKKHYRKAMIVVHPDKSGGRNAEQLLIAERVFAALNTAWEEF 469
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BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Match: A0A7S2G5F3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G5F3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 7.710e-23
Identity = 60/139 (43.17%), Postives = 89/139 (64.03%), Query Frame = 3 
Query: 1224 GQSAYVIAAKEERKKKLEEDTAKALK-FKKDIDAAAVREQEELDTAKTKWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKVKVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATF 1637
            G+SA+VI   ++R+ +++E    A++ ++K +D A   EQ E D  +   D +L  W E+HGKK+N+RTLL+ M  ++WEG  W+  ++ DL+    V+   RKA L VHPDK    G E RFIAKRVF+AL +AY+ F
Sbjct:  285 GKSAHVIEKMKQRRTQVDEAAKDAVEEYRKRVDKAKQEEQVE-DQLRATLDPKLKGWSEEHGKKKNIRTLLAGMDKIMWEGSGWKPVAIGDLLIEGSVRKYRRKADLKVHPDKTANLGPEQRFIAKRVFDALTQAYSEF 422
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig540.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHK2_ECTSI1.280e-7041.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJL8_9STRA6.590e-5468.53J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A6H5JQN3_9PHAE3.750e-4662.24J domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
A0A7S3HR35_9STRA5.410e-3044.76Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI000711C7623.200e-2745.89hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
D8LVM2_BLAHO7.830e-2545.26J domain-containing protein n=1 Tax=Blastocystis h... [more]
A0A196S8Y2_BLAHN1.850e-2442.47Auxilin-like protein n=1 Tax=Blastocystis sp. subt... [more]
A0A7S2YLR4_9STRA2.150e-2339.13Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
H3GVC8_PHYRM4.070e-2345.99Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S2G5F3_9STRA7.710e-2343.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig540contigP-wetherbeei_contig540:6303..9412 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHK2
Preferred nameSWA2
PFAMsUBA,Ubiq-assoc
Model size2287
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007029,GO:0008150,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0022411,GO:0030276,GO:0030544,GO:0031072,GO:0031593,GO:0031982,GO:0031984,GO:0032182,GO:0032781,GO:0032984,GO:0032991,GO:0042175,GO:0043085,GO:0043130,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043462,GO:0043624,GO:0043933,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048308,GO:0048309,GO:0050790,GO:0051179,GO:0051234,GO:0051261,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071840,GO:0072318,GO:0072319,GO:0098657,GO:0098827,GO:0140030
Exons4
Evalue2.68e-73
EggNOG OGsKOG0431@1|root,KOG0431@2759|Eukaryota
Descriptionclathrin-coated pit assembly
Cds size1644
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig540.3.2prot_P-wetherbeei_contig540.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig540 6317..8783 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186807.135144-UTR-P-wetherbeei_contig540:6302..63161683186807.135144-UTR-P-wetherbeei_contig540:6302..6316Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig540 6303..6316 +
1683186807.183852-UTR-P-wetherbeei_contig540:8783..94121683186807.183852-UTR-P-wetherbeei_contig540:8783..9412Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig540 8784..9412 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186807.1456373-CDS-P-wetherbeei_contig540:6316..64091683186807.1456373-CDS-P-wetherbeei_contig540:6316..6409Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig540 6317..6409 +
1683186807.154606-CDS-P-wetherbeei_contig540:6602..78281683186807.154606-CDS-P-wetherbeei_contig540:6602..7828Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig540 6603..7828 +
1683186807.163592-CDS-P-wetherbeei_contig540:8142..83201683186807.163592-CDS-P-wetherbeei_contig540:8142..8320Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig540 8143..8320 +
1683186807.1750042-CDS-P-wetherbeei_contig540:8636..87831683186807.1750042-CDS-P-wetherbeei_contig540:8636..8783Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig540 8637..8783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig540.3.2

>prot_P-wetherbeei_contig540.3.2 ID=prot_P-wetherbeei_contig540.3.2|Name=mRNA_P-wetherbeei_contig540.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=548bp
MAAAMAGQGAWVFYYLQGEDGESESNPNVFQVPNASRDVRLGQFMESFPL
RRHGGQYHFRFRAPDPVSGYCWLELRDPSATLPRYDDMVCAKVLRLDRLP
QPKPSRLRRKPVKAVLLSRAQAPAMSPPAGINGGGATGFSTTPPRPPAPD
SSSGPPSEPVRSQSGGALGAQRARSASPIPVPTSAAAAGRTTPRGAAAGG
GASGGQPLPGRNTTPPSSQQDGSAAGSVHDFFQDGSRGGGGGAAASSASA
SPVQPPAAASRGSPRGGIGIAPPPPARQRSSGGPNDLLNFDVPAAGGGAQ
PPPPPPPGAAEWASPVQTAPSSNGAPNSGGGVGVGSAADLMSMGAAAAWG
GPTGGARSHTAPNSPDRPGAGAYGGRGPPGAGGPSSGTGMLGGGIGIGGG
SVGGQSAYVIAAKEERKKKLEEDTAKALKFKKDIDAAAVREQEELDTAKT
KWDARLTSWGEDHGKKRNVRTLLSTMHLVLWEGCRWQAASMADLIPPNKV
KVAFRKAMLVVHPDKCVEFGSEARFIAKRVFEALNEAYATFAAQELG*
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mRNA from alignment at P-wetherbeei_contig540:6303..9412+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig540.3.2 ID=mRNA_P-wetherbeei_contig540.3.2|Name=mRNA_P-wetherbeei_contig540.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3110bp|location=Sequence derived from alignment at P-wetherbeei_contig540:6303..9412+ (Phaeothamnion wetherbeei SAG_119_79)
CGTTCACTCACGCAATGGCGGCTGCAATGGCCGGCCAAGGCGCATGGGTG
TTTTATTACTTGCAAGGCGAGGATGGAGAAAGCGAATCGAACCCGAACGT
CTTCCAGGTCAGCCGAATGAGCCCTTAGCGGCGTTTTGGGCTTCTTTCTT
CGCCCTCTCCCCTCGCTCTCTCTTTTAGTACGTAATTGCTTTGCACCTGC
GACCCCTCGCACTGCCACTTTCACGCGTTTCAATGTTCAATCCCTGGCCA
AAAAAACTCCGCTTTCCGCCTTCCATCTTCGCAAAAATACGTTTTTGCAG
GTGCCCAACGCCTCCCGAGACGTGCGCCTCGGCCAGTTCATGGAAAGTTT
CCCTCTGCGGCGCCACGGCGGACAGTATCACTTCCGCTTCCGGGCGCCGG
ACCCGGTTTCGGGATACTGCTGGCTCGAACTGAGAGACCCGTCGGCAACG
CTGCCCCGTTACGATGACATGGTCTGCGCGAAGGTGCTCCGCCTCGACCG
ACTACCGCAGCCGAAACCGTCGCGCCTCCGCCGTAAGCCCGTGAAGGCGG
TGCTCCTATCGCGGGCGCAGGCGCCGGCCATGTCGCCACCCGCCGGCATC
AACGGCGGCGGCGCCACGGGCTTCTCGACTACGCCGCCTCGGCCGCCGGC
GCCGGACTCTTCTTCCGGACCACCGTCAGAGCCCGTTCGCTCCCAGAGCG
GCGGCGCACTGGGCGCGCAGCGGGCCCGGAGCGCTTCCCCGATACCCGTC
CCGACCAGTGCCGCCGCCGCCGGACGCACAACGCCAAGAGGCGCTGCCGC
CGGCGGTGGCGCCTCGGGAGGACAGCCGCTGCCGGGCAGGAATACGACGC
CGCCGTCGAGCCAGCAAGACGGCAGCGCCGCAGGTAGTGTGCACGACTTC
TTCCAAGACGGCTCACGCGGCGGCGGCGGCGGGGCGGCGGCGTCTTCGGC
GTCGGCAAGCCCCGTACAGCCGCCGGCGGCGGCGTCGCGGGGAAGCCCGC
GTGGCGGAATCGGAATCGCGCCGCCGCCCCCAGCACGGCAGCGTTCCAGT
GGCGGCCCCAATGACCTCTTAAATTTTGATGTGCCGGCGGCCGGCGGGGG
GGCGCAGCCGCCACCACCCCCGCCACCGGGGGCGGCGGAATGGGCGTCGC
CCGTTCAGACGGCGCCGTCCTCCAACGGAGCGCCGAATAGCGGCGGCGGC
GTCGGCGTCGGCAGCGCTGCAGACCTGATGAGTATGGGCGCGGCGGCGGC
GTGGGGAGGCCCCACCGGCGGCGCCCGTTCGCACACGGCGCCGAACTCTC
CGGACCGGCCGGGAGCCGGCGCCTACGGCGGCAGAGGGCCGCCGGGCGCG
GGTGGACCGTCAAGCGGCACGGGGATGTTGGGCGGTGGAATCGGCATCGG
CGGCGGCAGCGTCGGCGGGCAGAGCGCCTACGTGATTGCGGCGAAGGAGG
AGCGCAAGAAGAAGCTAGAGGAGGACACCGCCAAGGCGCTGAAGTTCAAA
AAGGACATTGACGCCGCCGCCGTCAGGCGAGAGGAGGGAGCAGGTTTTCG
CCTTTTTTCCCCTCCTTCTTTTTTTATTCCCTCTTTTGCAATTCTTTTCC
TTGTTTGCGGGGTGGAATAAAGAGGCTTTGTGACGCCCCGGACAATGCGG
AATTGAGATATAATGTGTGAAACGGCCTCATTCAGGCCCTGTTTGCCCGC
TATCGCGACCAACTCGGGTATTCCAACTGCTCAACCTGCTCTGGCCCGTT
CTGTTTAAGTTCCGGAGCCAAGCAAACCATGGATAACAACGCTGCCTCCG
TCCACTCGCTGGCTCGCAATGTCCGCACTCATTGTGACAGGGAGCAGGAG
GAGCTGGACACGGCCAAGACGAAGTGGGACGCGCGACTTACGTCGTGGGG
CGAAGACCACGGCAAAAAGCGTAACGTCCGCACGCTCCTCTCCACAATGC
ACCTTGTGCTCTGGGAGGGGTGCCGCTGGCAGGCCGCCTCCATGGCGGAC
CTCATCCCGCCCAACAAGGTGCGGTTATGTCGGCGGTGCTCTCGGTTTGG
TTCGAATTTGCTTCCTTTCTTTCCGTTTGGATTGGTCTTGTTGGAATCTT
TGACGTGGGCGTGTGGATAAGGGAGAGTGAGGGGCTTTGACGTGGGCTTG
TCTGATGTTGCTTCCTTGGGCTGGCGGGTAGTTTTGCTGGCTGTTTCTCG
TTGCCGCTGCCGCATACCCGTGTTGGAAACCCTGCCTTAGGGTGCCTCAA
CCGCTGAACCGGCAAAGTGCTGCTTCCTCCCCGCGACTTCACCAACTGCT
GCCGGCACACCGGTGCAAAATTGCAAAACAACAGGTGAAGGTTGCGTTCC
GCAAGGCAATGCTGGTGGTGCACCCGGACAAGTGCGTCGAGTTCGGCAGC
GAGGCGCGCTTTATCGCCAAGCGCGTCTTCGAGGCCCTCAACGAGGCCTA
CGCCACCTTCGCCGCCCAGGAGCTCGGATGATATTTGCTACGGAGCTAGG
AACTACTGGCGCGGCTGGCAGCTGTGCCCGGGGAGCGTATACGCGGTGCT
GACCGCTCGGCTGTTGACGATTCGCGGCGTCGCTGCTTTCCTGCGTCGCC
GGCGAGGTGCGTCTTCGCTGGTACGTCGTCTGAGACTGGCGTGAGGCCGG
GCCGGGCACATATCTCTGAGCTGTGTTCGTGGAGCTTGGCCAGGCTAACG
GTCTGCAAGGGAGGCGGATTGGGATCCGCTTCCTTGCTCGTTGCCGTCGC
CGCCGCTACGCCTTGCATAGGGTGTTAAGTTGTAAGGACTCGGCGGTCGA
AGCGGTATGGGCGGCAAAAACGTCAGCTGCTTATTATGGCGACGGGTCTG
GCGACGCCGGCAACGGCGGCTCAATGATGGGGGCGCGGCCCTAGCGACAG
CCATCGCCCCGCAGCTCTTAGCAACAGCCGTCGCCCCGCAGCTCTTAGCA
ACAGCCATCGCCCCGCAGCTCTTAGCAACAGCAGCTGCAGCGCTGTACTG
ACGATGACGGTCGTTCTACGGGTGAGCGAAAGTGAGGCCTGCTATGATAT
ATGGGGCTGATGACCCTAACCGAACGAGGAGACTTTTTAATACCTGTTCC
GTCGCCGCCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig540:6303..9412+

>mRNA_P-wetherbeei_contig540.3.2 ID=mRNA_P-wetherbeei_contig540.3.2|Name=mRNA_P-wetherbeei_contig540.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1644bp|location=Sequence derived from alignment at P-wetherbeei_contig540:6303..9412+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCTGCAATGGCCGGCCAAGGCGCATGGGTGTTTTATTACTTGCA
AGGCGAGGATGGAGAAAGCGAATCGAACCCGAACGTCTTCCAGGTGCCCA
ACGCCTCCCGAGACGTGCGCCTCGGCCAGTTCATGGAAAGTTTCCCTCTG
CGGCGCCACGGCGGACAGTATCACTTCCGCTTCCGGGCGCCGGACCCGGT
TTCGGGATACTGCTGGCTCGAACTGAGAGACCCGTCGGCAACGCTGCCCC
GTTACGATGACATGGTCTGCGCGAAGGTGCTCCGCCTCGACCGACTACCG
CAGCCGAAACCGTCGCGCCTCCGCCGTAAGCCCGTGAAGGCGGTGCTCCT
ATCGCGGGCGCAGGCGCCGGCCATGTCGCCACCCGCCGGCATCAACGGCG
GCGGCGCCACGGGCTTCTCGACTACGCCGCCTCGGCCGCCGGCGCCGGAC
TCTTCTTCCGGACCACCGTCAGAGCCCGTTCGCTCCCAGAGCGGCGGCGC
ACTGGGCGCGCAGCGGGCCCGGAGCGCTTCCCCGATACCCGTCCCGACCA
GTGCCGCCGCCGCCGGACGCACAACGCCAAGAGGCGCTGCCGCCGGCGGT
GGCGCCTCGGGAGGACAGCCGCTGCCGGGCAGGAATACGACGCCGCCGTC
GAGCCAGCAAGACGGCAGCGCCGCAGGTAGTGTGCACGACTTCTTCCAAG
ACGGCTCACGCGGCGGCGGCGGCGGGGCGGCGGCGTCTTCGGCGTCGGCA
AGCCCCGTACAGCCGCCGGCGGCGGCGTCGCGGGGAAGCCCGCGTGGCGG
AATCGGAATCGCGCCGCCGCCCCCAGCACGGCAGCGTTCCAGTGGCGGCC
CCAATGACCTCTTAAATTTTGATGTGCCGGCGGCCGGCGGGGGGGCGCAG
CCGCCACCACCCCCGCCACCGGGGGCGGCGGAATGGGCGTCGCCCGTTCA
GACGGCGCCGTCCTCCAACGGAGCGCCGAATAGCGGCGGCGGCGTCGGCG
TCGGCAGCGCTGCAGACCTGATGAGTATGGGCGCGGCGGCGGCGTGGGGA
GGCCCCACCGGCGGCGCCCGTTCGCACACGGCGCCGAACTCTCCGGACCG
GCCGGGAGCCGGCGCCTACGGCGGCAGAGGGCCGCCGGGCGCGGGTGGAC
CGTCAAGCGGCACGGGGATGTTGGGCGGTGGAATCGGCATCGGCGGCGGC
AGCGTCGGCGGGCAGAGCGCCTACGTGATTGCGGCGAAGGAGGAGCGCAA
GAAGAAGCTAGAGGAGGACACCGCCAAGGCGCTGAAGTTCAAAAAGGACA
TTGACGCCGCCGCCGTCAGGGAGCAGGAGGAGCTGGACACGGCCAAGACG
AAGTGGGACGCGCGACTTACGTCGTGGGGCGAAGACCACGGCAAAAAGCG
TAACGTCCGCACGCTCCTCTCCACAATGCACCTTGTGCTCTGGGAGGGGT
GCCGCTGGCAGGCCGCCTCCATGGCGGACCTCATCCCGCCCAACAAGGTG
AAGGTTGCGTTCCGCAAGGCAATGCTGGTGGTGCACCCGGACAAGTGCGT
CGAGTTCGGCAGCGAGGCGCGCTTTATCGCCAAGCGCGTCTTCGAGGCCC
TCAACGAGGCCTACGCCACCTTCGCCGCCCAGGAGCTCGGATGA
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