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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2102 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Ec32 ortholog description | Transmembrane protein 161A/B |
| Ec32 ortholog | Ec-05_006130.1 |
| Cds size | 1812 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186806.9547014-UTR-P-wetherbeei_contig54:11359..11448 | 1683186806.9547014-UTR-P-wetherbeei_contig54:11359..11448 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig54 11360..11448 - |
| 1683186806.9780586-UTR-P-wetherbeei_contig54:13260..13461 | 1683186806.9780586-UTR-P-wetherbeei_contig54:13260..13461 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig54 13261..13461 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186806.9667933-CDS-P-wetherbeei_contig54:11448..13260 | 1683186806.9667933-CDS-P-wetherbeei_contig54:11448..13260 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig54 11449..13260 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54.8.1 >prot_P-wetherbeei_contig54.8.1 ID=prot_P-wetherbeei_contig54.8.1|Name=mRNA_P-wetherbeei_contig54.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=604bp
MEAPSESVLVLCVVVAVFRVSMKRNIAHLFFDGLHYAEPPTEEAVAKIQP
PEHARRAARADAEAPDALARLQSLDVREAVITPGSLFDEPHFDSLDTVCV
AAFIALLGLAAATVYRCVLPTAAASVWLLLLLVWSGATATVSTARLAWMA
GPRASWEARLSLIAGAAGFFLSFAAVHVPAGWLDFDVHASFEVLHGRLAA
LMLTLGGPPKPGPGAAGSGSVGGGGGNGGEPWQNDIDVLGLSLRSFAGLC
HLLLALAAAGAAAAVPAAALRFGQTAGEQLRDGVLPASRWLRALLWTDVF
LPWLLVLLWVPSVALLPLSPWLATATAAAQGAGGAADVAASAKVAAAAPA
ALAGLRTVRAALAAAALSLRLYLARSHFQTFLNMVLLGALRSELAAPRVD
AARLRSFFSLRRQSLPMVAAQYMAPIVFAGAALAVTLYGGAGAIWACDLG
RRALGLASCGEASAATAAAAPAAAAAGNAAAAGGGGPADASAAIAAAAAA
AAAARNGSLRTVLDAPSRAGFRQLAADLDLSRLFIGPEPASGVASFLLWW
ALLWWASGYTFAVFKYRRRSLAAGAAGPAVRRYQSGVDRTTKKERPAAKA
KAA* back to topmRNA from alignment at P-wetherbeei_contig54:11360..13461- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig54.8.1 ID=mRNA_P-wetherbeei_contig54.8.1|Name=mRNA_P-wetherbeei_contig54.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2102bp|location=Sequence derived from alignment at P-wetherbeei_contig54:11360..13461- (Phaeothamnion wetherbeei SAG_119_79)
AAAGGGGACCGAGAAGAGGCAACCTTTCGGGTTTCTTTCAACTCTTTTGG
ATTCGGTTGTGCGGAGGTCGGTGCACCCTTTCAAAAGGTATGTAGGTGGA
CAACAGTTGGTTTGTGTTCCTCTTTGAATAATCTCTAACCTTCAACCATA
ACTTTGCCCACTGCTTTCGCAACGCCAAGGCCGATTATACGCCGACGGCA
AATGGAGGCGCCTAGCGAAAGCGTGTTGGTGTTGTGCGTGGTTGTGGCTG
TGTTTCGCGTCAGCATGAAGCGCAACATCGCCCACCTGTTCTTTGACGGC
CTCCACTACGCCGAGCCGCCAACCGAGGAGGCGGTGGCGAAGATCCAGCC
GCCCGAGCACGCTCGTAGGGCCGCACGCGCAGACGCCGAAGCGCCGGACG
CCCTGGCCCGGCTGCAGAGCCTCGACGTGCGCGAAGCAGTCATCACTCCG
GGCTCCCTCTTCGACGAGCCGCATTTCGACTCCCTGGACACCGTGTGCGT
GGCCGCCTTCATCGCGCTGCTGGGGCTCGCAGCGGCGACCGTCTACCGCT
GCGTCCTGCCCACTGCAGCGGCCAGCGTCTGGCTGCTGCTACTTCTGGTG
TGGTCCGGCGCCACCGCGACTGTATCCACGGCGCGCCTGGCCTGGATGGC
GGGGCCCCGCGCAAGCTGGGAGGCTCGGCTTTCGCTGATCGCCGGCGCCG
CCGGTTTTTTCCTTTCGTTCGCCGCGGTCCATGTTCCTGCCGGCTGGCTT
GACTTCGACGTCCACGCCTCGTTCGAAGTGCTCCACGGCCGCCTCGCCGC
GCTGATGCTCACACTCGGCGGCCCGCCAAAGCCTGGGCCAGGAGCGGCGG
GAAGCGGCAGTGTCGGTGGTGGCGGCGGCAACGGCGGCGAGCCGTGGCAG
AACGACATCGATGTCCTGGGGTTGTCACTGCGCAGCTTCGCGGGCCTGTG
CCACCTGCTGCTGGCGCTGGCGGCGGCGGGCGCGGCCGCGGCGGTGCCAG
CGGCGGCGCTCCGCTTTGGCCAGACGGCCGGCGAGCAGCTGCGTGACGGC
GTGCTGCCGGCATCGCGCTGGCTCCGCGCGCTTTTGTGGACCGACGTCTT
CCTCCCATGGCTCCTTGTCCTTCTCTGGGTGCCGTCCGTCGCTCTCTTAC
CGCTGTCGCCGTGGCTGGCGACGGCGACAGCGGCGGCGCAAGGTGCGGGA
GGAGCGGCGGATGTGGCGGCATCGGCAAAAGTGGCGGCGGCGGCTCCGGC
GGCCTTGGCGGGGTTGCGGACGGTGCGGGCAGCTCTGGCGGCGGCGGCGC
TGTCCCTCCGGCTGTACCTGGCGCGGTCCCACTTCCAAACCTTCCTCAAC
ATGGTCCTGCTCGGAGCGCTCCGGTCGGAGTTGGCGGCGCCGCGCGTCGA
CGCGGCGCGGCTCCGGTCGTTCTTCAGCCTCCGGCGCCAGTCACTGCCCA
TGGTCGCCGCGCAGTACATGGCTCCGATCGTCTTCGCCGGCGCCGCGCTG
GCCGTGACGCTCTATGGCGGCGCCGGCGCCATCTGGGCGTGCGATCTCGG
CCGCCGGGCGCTGGGGCTCGCCAGCTGCGGAGAGGCTTCCGCTGCTACTG
CAGCGGCAGCGCCGGCGGCGGCGGCGGCGGGAAACGCGGCGGCAGCCGGA
GGTGGGGGGCCGGCAGATGCGTCGGCGGCAATTGCTGCGGCGGCGGCGGC
GGCGGCGGCGGCGCGGAACGGCTCGCTGCGAACGGTACTGGATGCGCCGA
GCCGAGCCGGCTTCCGGCAACTGGCGGCGGACCTGGACCTATCGCGGCTG
TTTATCGGACCGGAGCCGGCATCCGGCGTGGCCAGTTTTCTGTTATGGTG
GGCGTTGCTGTGGTGGGCGAGTGGCTACACGTTCGCCGTTTTCAAGTACC
GCCGGCGCTCGCTGGCGGCCGGGGCGGCGGGGCCGGCGGTGCGGCGCTAC
CAGAGCGGGGTAGACCGAACCACGAAGAAGGAGAGGCCTGCGGCAAAGGC
CAAGGCAGCATGATAGTCTCATGATAACCCTCACACAGCGCACGGCCGCG
AAGAAAATGGGAGGCATACAGCTCCATTTAAAACATATTGGTAATTAAGG
TC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig54:11360..13461- >mRNA_P-wetherbeei_contig54.8.1 ID=mRNA_P-wetherbeei_contig54.8.1|Name=mRNA_P-wetherbeei_contig54.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1812bp|location=Sequence derived from alignment at P-wetherbeei_contig54:11360..13461- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGCGCCTAGCGAAAGCGTGTTGGTGTTGTGCGTGGTTGTGGCTGT
GTTTCGCGTCAGCATGAAGCGCAACATCGCCCACCTGTTCTTTGACGGCC
TCCACTACGCCGAGCCGCCAACCGAGGAGGCGGTGGCGAAGATCCAGCCG
CCCGAGCACGCTCGTAGGGCCGCACGCGCAGACGCCGAAGCGCCGGACGC
CCTGGCCCGGCTGCAGAGCCTCGACGTGCGCGAAGCAGTCATCACTCCGG
GCTCCCTCTTCGACGAGCCGCATTTCGACTCCCTGGACACCGTGTGCGTG
GCCGCCTTCATCGCGCTGCTGGGGCTCGCAGCGGCGACCGTCTACCGCTG
CGTCCTGCCCACTGCAGCGGCCAGCGTCTGGCTGCTGCTACTTCTGGTGT
GGTCCGGCGCCACCGCGACTGTATCCACGGCGCGCCTGGCCTGGATGGCG
GGGCCCCGCGCAAGCTGGGAGGCTCGGCTTTCGCTGATCGCCGGCGCCGC
CGGTTTTTTCCTTTCGTTCGCCGCGGTCCATGTTCCTGCCGGCTGGCTTG
ACTTCGACGTCCACGCCTCGTTCGAAGTGCTCCACGGCCGCCTCGCCGCG
CTGATGCTCACACTCGGCGGCCCGCCAAAGCCTGGGCCAGGAGCGGCGGG
AAGCGGCAGTGTCGGTGGTGGCGGCGGCAACGGCGGCGAGCCGTGGCAGA
ACGACATCGATGTCCTGGGGTTGTCACTGCGCAGCTTCGCGGGCCTGTGC
CACCTGCTGCTGGCGCTGGCGGCGGCGGGCGCGGCCGCGGCGGTGCCAGC
GGCGGCGCTCCGCTTTGGCCAGACGGCCGGCGAGCAGCTGCGTGACGGCG
TGCTGCCGGCATCGCGCTGGCTCCGCGCGCTTTTGTGGACCGACGTCTTC
CTCCCATGGCTCCTTGTCCTTCTCTGGGTGCCGTCCGTCGCTCTCTTACC
GCTGTCGCCGTGGCTGGCGACGGCGACAGCGGCGGCGCAAGGTGCGGGAG
GAGCGGCGGATGTGGCGGCATCGGCAAAAGTGGCGGCGGCGGCTCCGGCG
GCCTTGGCGGGGTTGCGGACGGTGCGGGCAGCTCTGGCGGCGGCGGCGCT
GTCCCTCCGGCTGTACCTGGCGCGGTCCCACTTCCAAACCTTCCTCAACA
TGGTCCTGCTCGGAGCGCTCCGGTCGGAGTTGGCGGCGCCGCGCGTCGAC
GCGGCGCGGCTCCGGTCGTTCTTCAGCCTCCGGCGCCAGTCACTGCCCAT
GGTCGCCGCGCAGTACATGGCTCCGATCGTCTTCGCCGGCGCCGCGCTGG
CCGTGACGCTCTATGGCGGCGCCGGCGCCATCTGGGCGTGCGATCTCGGC
CGCCGGGCGCTGGGGCTCGCCAGCTGCGGAGAGGCTTCCGCTGCTACTGC
AGCGGCAGCGCCGGCGGCGGCGGCGGCGGGAAACGCGGCGGCAGCCGGAG
GTGGGGGGCCGGCAGATGCGTCGGCGGCAATTGCTGCGGCGGCGGCGGCG
GCGGCGGCGGCGCGGAACGGCTCGCTGCGAACGGTACTGGATGCGCCGAG
CCGAGCCGGCTTCCGGCAACTGGCGGCGGACCTGGACCTATCGCGGCTGT
TTATCGGACCGGAGCCGGCATCCGGCGTGGCCAGTTTTCTGTTATGGTGG
GCGTTGCTGTGGTGGGCGAGTGGCTACACGTTCGCCGTTTTCAAGTACCG
CCGGCGCTCGCTGGCGGCCGGGGCGGCGGGGCCGGCGGTGCGGCGCTACC
AGAGCGGGGTAGACCGAACCACGAAGAAGGAGAGGCCTGCGGCAAAGGCC
AAGGCAGCATGA back to top
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