mRNA_P-wetherbeei_contig53995.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A7C3DAM9_9GAMM (UDP-glucose 4-epimerase n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7C3DAM9_9GAMM) HSP 1 Score: 272 bits (696), Expect = 5.290e-89 Identity = 131/178 (73.60%), Postives = 151/178 (84.83%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDG-ICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GD+ELV +LR++ +DTV+HFAA TIVPESV PLKYYANNT NTRNLLECC AG+ FVFSSTAAVYG+P D +CAEDT T PINPYG SKLMSE M+RD G A +R V+LRYFNVAGSDP+GRIGQST ++TLLIKVAAEAA+GKRD L+++GTD+PT DGTGVRDYIHV DL
Sbjct: 55 GDQELVSHLLRDYNVDTVLHFAAHTIVPESVEKPLKYYANNTCNTRNLLECCANAGVRHFVFSSTAAVYGIPADSPVCAEDTPTAPINPYGSSKLMSEQMIRDLGKASDMRHVILRYFNVAGSDPEGRIGQSTKNATLLIKVAAEAAVGKRDTLYIFGTDFPTPDGTGVRDYIHVEDL 232
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: UPI0005EBDC1A (UDP-glucose 4-epimerase GalE n=1 Tax=Methyloterricola oryzae TaxID=1495050 RepID=UPI0005EBDC1A) HSP 1 Score: 270 bits (690), Expect = 3.790e-88 Identity = 130/177 (73.45%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GD ELV RVLRE+ +++V+HFAA TIVPESV NPLKYY NNT TRNLLECC AG+ F+FSSTAA YG+P +C EDT T PINPYG SKLMSE MLRD A LR V+LRYFNVAGSDPDG+IGQST ++TLLIKVAAE A+GKR+KL+V+GTDYPT DGTGVRDYIHVSDL
Sbjct: 55 GDMELVSRVLREYDVESVIHFAAHTIVPESVENPLKYYGNNTCKTRNLLECCQKAGVKHFIFSSTAATYGIPEGSLCTEDTPTSPINPYGMSKLMSETMLRDLSLACDLRHVILRYFNVAGSDPDGQIGQSTKNATLLIKVAAEVAVGKREKLYVFGTDYPTADGTGVRDYIHVSDL 231
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A3B0ZJT8_9ZZZZ (UDP-glucose 4-epimerase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0ZJT8_9ZZZZ) HSP 1 Score: 269 bits (687), Expect = 1.050e-87 Identity = 130/177 (73.45%), Postives = 148/177 (83.62%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GD+ +V RVL+EHAIDTV+HFAA TIVPESV NPLKYY NNT TRNLLECC AAG+ F+FSSTAAVYG+P C ED+ PINPYG SKLMSE+MLRD G A +R V+LRYFNVAGSDP+G+IGQST +TLLIKVAAE A+GKR+KL+V+GTDYPT DGTGVRDYIHV DL
Sbjct: 54 GDKTVVKRVLKEHAIDTVLHFAAHTIVPESVENPLKYYGNNTCCTRNLLECCSAAGVKHFIFSSTAAVYGIPDGPECTEDSPLAPINPYGTSKLMSEMMLRDLGKASDMRHVILRYFNVAGSDPEGQIGQSTEKATLLIKVAAEVAVGKREKLYVFGTDYPTADGTGVRDYIHVDDL 230
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A1V3N9X0_9GAMM (UDP-glucose 4-epimerase n=1 Tax=Thioalkalivibrio denitrificans TaxID=108003 RepID=A0A1V3N9X0_9GAMM) HSP 1 Score: 266 bits (681), Expect = 8.230e-87 Identity = 134/177 (75.71%), Postives = 145/177 (81.92%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GDR LV RVL EH IDTVMHFAA TIVPESVS+PLKYY NNT TRNLLECC AG+ FVFSSTAAVYG+P DG+ ED+ T PINPYG SKLMSE MLRD A LR V+LRYFNVAGSDP GRIGQST ++TLLIKVA E ALGKR +L V+GTDYPT DGTGVRDYIHV+DL
Sbjct: 55 GDRALVSRVLAEHDIDTVMHFAAHTIVPESVSDPLKYYRNNTCATRNLLECCRDAGVRHFVFSSTAAVYGIPDDGLAREDSPTAPINPYGTSKLMSEWMLRDLSAATDLRHVILRYFNVAGSDPGGRIGQSTREATLLIKVACEVALGKRPELTVFGTDYPTPDGTGVRDYIHVTDL 231
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A4R1HFM4_9GAMM (UDP-glucose 4-epimerase n=3 Tax=root TaxID=1 RepID=A0A4R1HFM4_9GAMM) HSP 1 Score: 264 bits (675), Expect = 6.680e-86 Identity = 126/177 (71.19%), Postives = 146/177 (82.49%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GD+ LV +VL +H +DTV+HFAA TIVPESV PLKYY NNT TRNLLECC AG+ F+FSSTAAVYG+P D +C ED+ PINPYG SKLMSE+MLRD G A +R V+LRYFNVAGSDP+GRIGQST +TLLIKVAAE A+GKR++L+V+GTDYPT DGTGVRDYIHV DL
Sbjct: 55 GDKALVSKVLADHNVDTVLHFAAHTIVPESVEKPLKYYGNNTCCTRNLLECCSEAGVKHFIFSSTAAVYGIPEDSMCTEDSPLSPINPYGTSKLMSEMMLRDLGKATDMRHVILRYFNVAGSDPEGRIGQSTEKATLLIKVAAEVAVGKREQLYVFGTDYPTPDGTGVRDYIHVDDL 231
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A2W4QAH2_9GAMM (UDP-glucose 4-epimerase n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4QAH2_9GAMM) HSP 1 Score: 263 bits (673), Expect = 1.470e-85 Identity = 125/177 (70.62%), Postives = 146/177 (82.49%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GD ELV ++L++H I+ V+HFAA TIVPESV NPLKYY NNT TRNLL+CC AG++ F+FSSTAA YG+P D IC+EDT T PINPYG SKLMSE+MLRD A LR V+LRYFNVAGSDP+ +IGQST ++TLLIKVA E A+GKR+KL V+G DYPT DGTGVRDYIHVSDL
Sbjct: 55 GDTELVSKILQQHDIEAVIHFAAHTIVPESVENPLKYYGNNTCKTRNLLQCCQQAGVSHFIFSSTAAAYGIPKDTICSEDTVTAPINPYGSSKLMSEMMLRDLSAASSLRHVILRYFNVAGSDPESQIGQSTRNATLLIKVAVEVAVGKREKLLVFGDDYPTLDGTGVRDYIHVSDL 231
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A370DT46_9GAMM (UDP-glucose 4-epimerase n=8 Tax=Bacteria TaxID=2 RepID=A0A370DT46_9GAMM) HSP 1 Score: 263 bits (673), Expect = 1.570e-85 Identity = 124/177 (70.06%), Postives = 145/177 (81.92%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GD+ LV RVL+EH IDTV+HFAA T+VPESV +PLKYY NNT NTR++L+CC AG+ F+FSSTAAVYG P GI EDT T PINPYG SKLMSE MLRD A ++ V+LRYFNVAG DP+GRIGQ+TP++TLL KVA EAA+GKRD +++YGTDYPT DGTGVRDYIHV DL
Sbjct: 55 GDQALVSRVLKEHDIDTVLHFAAHTVVPESVEDPLKYYGNNTCNTRSMLQCCAEAGVENFIFSSTAAVYGTPESGIAHEDTPTSPINPYGTSKLMSEWMLRDLSAATDMKHVILRYFNVAGCDPEGRIGQATPNATLLTKVACEAAVGKRDSVYIYGTDYPTPDGTGVRDYIHVEDL 231
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A1E2UUV9_9GAMM (UDP-glucose 4-epimerase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1E2UUV9_9GAMM) HSP 1 Score: 263 bits (673), Expect = 1.570e-85 Identity = 127/177 (71.75%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GDRELV R+L EH IDTVMHFAA TIVPESV NPLKYYANNT NTR+LL+CC AG+ FVFSSTAAVYG+P G+ EDT T PINPYG SKLMSE+ML D A + + LRYFNVAG D +GRIGQSTP +TLL KVA EAA+GKRD ++++GTDYPT DGTGVRDYIHV DL
Sbjct: 55 GDRELVSRILEEHEIDTVMHFAAHTIVPESVENPLKYYANNTCNTRSLLQCCAEAGVKNFVFSSTAAVYGIPEKGVAYEDTPTSPINPYGTSKLMSEMMLHDLSQATEMNYIALRYFNVAGCDLEGRIGQSTPKATLLTKVACEAAVGKRDAVYIFGTDYPTADGTGVRDYIHVEDL 231
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A3B1AX85_9ZZZZ (UDP-glucose 4-epimerase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1AX85_9ZZZZ) HSP 1 Score: 263 bits (673), Expect = 1.570e-85 Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GDRELV ++L+EH I +VMHFAA TIVPESVSNPLKYY NNT N+RNLLECC AAG+ F+FSSTAAVYG+P EDT T PIN YG SKLM+E ML+D FA LR V LRYFNVAGSDP+GRIGQST +TLL+KVA E ALGKRDK+ ++GTDYPT DGTG+RDYIHV DL
Sbjct: 56 GDRELVSQILKEHNIGSVMHFAAHTIVPESVSNPLKYYGNNTCNSRNLLECCAAAGVEHFIFSSTAAVYGIPDVDQVTEDTPTAPINAYGSSKLMTEQMLKDLSFATDLRHVALRYFNVAGSDPEGRIGQSTKKATLLVKVACETALGKRDKICIFGTDYPTPDGTGIRDYIHVEDL 232
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Match: A0A841HG63_9GAMM (UDP-glucose 4-epimerase n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HG63_9GAMM) HSP 1 Score: 263 bits (671), Expect = 3.060e-85 Identity = 131/177 (74.01%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 1 GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLECCVAAGITQFVFSSTAAVYGMPGDGICAEDTATLPINPYGQSKLMSELMLRDTGFAHGLRSVVLRYFNVAGSDPDGRIGQSTPDSTLLIKVAAEAALGKRDKLFVYGTDYPTKDGTGVRDYIHVSDL 531
GDRELV +LREH IDTV+HFAA TIVPESVSNPLKYY NNT +TRNLL+CC AAG+ FVFSSTAAVYG+P GI AED+ PINPYG SKLMSE MLRD A LR VVLRYFNVAGSDP GRIGQST + TLL KVA E A+GKR + ++GTDYPT DGTGVRDYIHV DL
Sbjct: 52 GDRELVSGLLREHGIDTVLHFAAHTIVPESVSNPLKYYGNNTCSTRNLLQCCEAAGVKHFVFSSTAAVYGIPDGGIAAEDSPNRPINPYGTSKLMSEWMLRDLAAASPLRYVVLRYFNVAGSDPGGRIGQSTINGTLLTKVACETAVGKRPHVSIFGTDYPTPDGTGVRDYIHVEDL 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53995.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53995.1.1 >prot_P-wetherbeei_contig53995.1.1 ID=prot_P-wetherbeei_contig53995.1.1|Name=mRNA_P-wetherbeei_contig53995.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp GDRELVGRVLREHAIDTVMHFAAFTIVPESVSNPLKYYANNTANTRNLLEback to top mRNA from alignment at P-wetherbeei_contig53995:2..532+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53995.1.1 ID=mRNA_P-wetherbeei_contig53995.1.1|Name=mRNA_P-wetherbeei_contig53995.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig53995:2..532+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53995:2..532+ >mRNA_P-wetherbeei_contig53995.1.1 ID=mRNA_P-wetherbeei_contig53995.1.1|Name=mRNA_P-wetherbeei_contig53995.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig53995:2..532+ (Phaeothamnion wetherbeei SAG_119_79)back to top |