mRNA_P-wetherbeei_contig53937.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53937.1.1
Unique NamemRNA_P-wetherbeei_contig53937.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A6J5RPY1_9CAUD (Uncharacterized protein n=1 Tax=uncultured Caudovirales phage TaxID=2100421 RepID=A0A6J5RPY1_9CAUD)

HSP 1 Score: 166 bits (420), Expect = 1.810e-44
Identity = 98/179 (54.75%), Postives = 122/179 (68.16%), Query Frame = 1
Query:    1 SGATVNRYKVTAIAADGLEESY---PVTVTSGAPINITAVTQANPGVLSVAAHGRAVGDPVLISGATGMPSINGEWLVNTVPGANTLSLKSTSGVVLDTTLLPAYIGGGTLSYAAVVNALTTAGNLNTITIALAALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPPIIDD 528
            SG    RYK+T++A DGLEES    P  V  GA I IT +T+A+PGVLSVAAHGR+VGD V I    GM  I+GE+LVN+ P A TL+LK+  GV +DTT    Y  GG   +  VVN L+TAGN NT+T    A A R +VYK  +GL+GYIGQT+ ++F D NITAD ++TPP IDD
Sbjct:  251 SGTDRTRYKITSVATDGLEESIASGPCVV--GAGIAITGITKASPGVLSVAAHGRSVGDGVYIENVLGMTEIDGEYLVNSTPTAGTLTLKTLDGVAVDTTAFSTYTAGGMFYFTDVVNTLSTAGNKNTVTFTKNADAIRSNVYKLKNGLYGYIGQTALSSFEDANITADLSKTPPEIDD 427          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A2D6RTX8_9BURK (Uncharacterized protein n=1 Tax=Sutterellaceae bacterium TaxID=2026794 RepID=A0A2D6RTX8_9BURK)

HSP 1 Score: 142 bits (358), Expect = 5.080e-36
Identity = 81/176 (46.02%), Postives = 111/176 (63.07%), Query Frame = 1
Query:    1 SGATVNRYKVTAIAADGLEESYPV--TVTSGAPINITAVTQANPGVLSVAAHGRAVGDPVLISGATGMPSINGEW-LVNTVPGANTLSLKSTSGVVLDTTLLPAYIGGGTLSYAAVVNALTTAGNLNTITIALAALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPPI 519
            +G  +  Y +T +  DG+EESY     +       +T++T A+PGV  V  HG    DPV + G  G  S+N E+ LVN+ P  +TL+LK+ +GV +DT+ LPAY+ GGT++ AAV N L  A   NTI    A  A RY+VYK F+G+WGYIGQ    +F+D+NIT DTT+TPPI
Sbjct:  217 TGTILYAYTLTTVNEDGVEESYQADQALNPATAKAVTSLTAASPGVFGVVGHGFVENDPVYLDGLVGPVSLNDEYYLVNSAPTVDTLTLKTRNGVAIDTSALPAYVSGGTITLAAVKNDLAAADAKNTIRWTAAPGAFRYNVYKDFNGVWGYIGQAQGTSFIDDNITPDTTKTPPI 392          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A1L3ZVI0_9SPHN (Uncharacterized protein n=1 Tax=Tardibacter chloracetimidivorans TaxID=1921510 RepID=A0A1L3ZVI0_9SPHN)

HSP 1 Score: 103 bits (258), Expect = 1.350e-22
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 1
Query:   10 TVNRYKVTAIAADGLEESYPVTVTSGAPINITAVTQANPGVLSVAAH---GRAVGDPVLISGATGMPSINGEW-LVNT------------VPGANTLSLKSTS-GVVLDTTLLPAYIGGGTLSYAAVV---NALTTAGNLNTITIALAALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPPI 519
            T+  Y VTA++  G +ES P   +    + +T +T+ANPGV S  +    G  VGD V +SG  GM  +NG + L+N+             PG  +++LK  S G  L+T+    Y GGGT++        N L   G  NTI+ A    A RY+VYK  +GL+G+IGQT   +F D+NI AD +RTPPI
Sbjct:  179 TLQSYTVTAVS--GQDESAPAANSLSGSVTLTGITKANPGVFSATSFTDPGFTVGDKVYVSGVGGMSEVNGNYYLINSYSFTPPGGGEFPTPGIVSMTLKDVSTGTPLNTSSFSTYSGGGTVALVGAARCSNNLFDTGAYNTISWAAVTGAKRYNVYKLSNGLYGFIGQTENLSFTDDNIAADLSRTPPI 366          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A516LLT7_9VIRU (Uncharacterized protein n=1 Tax=Prokaryotic dsDNA virus sp. TaxID=2591644 RepID=A0A516LLT7_9VIRU)

HSP 1 Score: 95.9 bits (237), Expect = 9.020e-20
Identity = 65/174 (37.36%), Postives = 99/174 (56.90%), Query Frame = 1
Query:    1 SGATVNRYKVTAIAADGLEESYPVTVTSGAPINITAVTQANPGVLSVAAHGRAVGDPVLISGATGMPSINGEWLVNTVPGANTLSLKSTSGVVLDTTLLPAYIGGGTLS--YAAVVNALTTAGNLNTITIALAALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPP 516
            +G+  +RY VTA+  D  EES  +   +    +ITA+T+A+PGV++ ++HG + GD V I    GM  +N E         NT +L  T+G  ++TT    Y  GGT +  +  V N+  T  N  T+    AA A  Y+VY+  +GL+G+IG+T + +F D+N+  DTT TPP
Sbjct:  249 TGSETDRYVVTAVNRDTAEES--LRGLNSTAKSITAITKADPGVVTSSSHGFSDGDEVYIQSVGGMVEVNNEVYKAAGVTTNTFNLTDTTGANVNTTNFTTYTSGGTANQMFVKVTNSHETRDN--TVAWTAAADAESYNVYREKNGLFGFIGRTEDTSFTDSNVAPDTTDTPP 418          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A5C7PK35_9DELT (Uncharacterized protein n=1 Tax=Desulfurellales bacterium TaxID=2482794 RepID=A0A5C7PK35_9DELT)

HSP 1 Score: 88.2 bits (217), Expect = 3.740e-17
Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  217 WLVNTVPGANTLSLKSTSGVVLDTTLLPAYIGGGTLSYAAVVNALTTAGNLNTITIALAALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPPIIDD 528
            + VNTVP +NT++L   +G V+DT+   AY GGG L  + + N L   G  NT+T A    A+RY+VYK+  G++GYIGQT   +F+D+NI  D  ++PP+ ++
Sbjct:    9 YTVNTVPSSNTMTLADAAGNVIDTSAFGAYTGGGKLYASGIKNNLLATGGANTVTWADVPGASRYNVYKFQGGVYGYIGQTEGTSFIDDNIAPDLGKSPPVYEE 112          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A6J5LFD6_9CAUD (Uncharacterized protein n=1 Tax=uncultured Caudovirales phage TaxID=2100421 RepID=A0A6J5LFD6_9CAUD)

HSP 1 Score: 63.2 bits (152), Expect = 1.970e-8
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query:  325 SYAAVVNALTTAGNLNTITIALAALATRYSVYKYFSG-LWGYIGQTSENTFVDNNITADTTRTPPI 519
            S A V N L T+GN NTIT    + A RY+VYK  +G L+GYIGQ+   TF+D+NITAD ++TPP+
Sbjct:  195 SAANVTNNLLTSGNKNTITWGSVSGAVRYNVYKQANGALYGYIGQSDGTTFIDDNITADISKTPPL 260          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A6M3M7G8_9ZZZZ (Putative tail tubular protein (Fragment) n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6M3M7G8_9ZZZZ)

HSP 1 Score: 62.8 bits (151), Expect = 2.650e-8
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1
Query:  100 ITAVTQANPGVLSVAAHGRAVGDPVLISGATGMPSINGEWLVNTVPGANTLSLKSTSGVVLDTTLLPAYIGGGT 321
            ITA+TQA+PGV+++ AHG + GD + I    GM  +N ++ +    GA+T SL    G  +DTT   AY  GGT
Sbjct:  323 ITAITQADPGVITITAHGYSTGDEIYIENIEGMTELNNKFYLVVKIGADTFSLTDVDGNAIDTTAYTAYTAGGT 396          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A6M3M3Q7_9ZZZZ (Putative tail tubular protein n=2 Tax=viral metagenome TaxID=1070528 RepID=A0A6M3M3Q7_9ZZZZ)

HSP 1 Score: 62.8 bits (151), Expect = 2.790e-8
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1
Query:  100 ITAVTQANPGVLSVAAHGRAVGDPVLISGATGMPSINGEWLVNTVPGANTLSLKSTSGVVLDTTLLPAYIGGGT 321
            ITA+TQA+PGV+++ AHG + GD + I    GM  +N ++ +    GA+T SL    G  +DTT   AY  GGT
Sbjct:  323 ITAITQADPGVITITAHGYSTGDEIYIENIEGMTELNNKFYLVVKIGADTFSLTDVDGNAIDTTAYTAYTAGGT 396          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: UPI0003498C8F (hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 TaxID=1075768 RepID=UPI0003498C8F)

HSP 1 Score: 61.6 bits (148), Expect = 6.550e-8
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  331 AAVVNALTTAGNLNTITIAL-AALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPPIID 525
            A + N LT +G+ NTI+ A  A    RY+VYK  +GL+G+IGQ +  +FVDNNIT D  RTPPI D
Sbjct:  197 AVITNDLTISGHYNTISWAAPAGTIARYNVYKLANGLYGFIGQAASLSFVDNNITPDVARTPPIND 262          
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Match: A0A4Y5NYA2_9CAUD (Uncharacterized protein n=2 Tax=unclassified Rauchvirus TaxID=2315200 RepID=A0A4Y5NYA2_9CAUD)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-7
Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  343 NALTTAGNLNTITIALAALATRYSVYKYFSGLWGYIGQTSENTFVDNNITADTTRTPP 516
            N L+  GN NT++   A  ATRY+VYKY  G++G+IGQ++  +FVD+NI+ADT   PP
Sbjct:  249 NNLSGIGNYNTVSWTAATGATRYNVYKYEGGVYGFIGQSTTTSFVDDNISADTAYAPP 306          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53937.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J5RPY1_9CAUD1.810e-4454.75Uncharacterized protein n=1 Tax=uncultured Caudovi... [more]
A0A2D6RTX8_9BURK5.080e-3646.02Uncharacterized protein n=1 Tax=Sutterellaceae bac... [more]
A0A1L3ZVI0_9SPHN1.350e-2238.95Uncharacterized protein n=1 Tax=Tardibacter chlora... [more]
A0A516LLT7_9VIRU9.020e-2037.36Uncharacterized protein n=1 Tax=Prokaryotic dsDNA ... [more]
A0A5C7PK35_9DELT3.740e-1743.27Uncharacterized protein n=1 Tax=Desulfurellales ba... [more]
A0A6J5LFD6_9CAUD1.970e-854.55Uncharacterized protein n=1 Tax=uncultured Caudovi... [more]
A0A6M3M7G8_9ZZZZ2.650e-843.24Putative tail tubular protein (Fragment) n=1 Tax=v... [more]
A0A6M3M3Q7_9ZZZZ2.790e-843.24Putative tail tubular protein n=2 Tax=viral metage... [more]
UPI0003498C8F6.550e-853.03hypothetical protein n=1 Tax=Janthinobacterium sp.... [more]
A0A4Y5NYA2_9CAUD1.220e-751.72Uncharacterized protein n=2 Tax=unclassified Rauch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53937contigP-wetherbeei_contig53937:1..528 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog575564.HMPREF0014_00743
Model size528
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.27e-07
EggNOG OGs28I8X@1|root,2Z8BQ@2|Bacteria,1MW9X@1224|Proteobacteria,1RR0M@1236|Gammaproteobacteria,3NM85@468|Moraxellaceae
Cds size528
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186806.0781205-CDS-P-wetherbeei_contig53937:0..5281683186806.0781205-CDS-P-wetherbeei_contig53937:0..528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53937 1..528 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53937.1.1prot_P-wetherbeei_contig53937.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53937 1..528 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53937.1.1

>prot_P-wetherbeei_contig53937.1.1 ID=prot_P-wetherbeei_contig53937.1.1|Name=mRNA_P-wetherbeei_contig53937.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
SGATVNRYKVTAIAADGLEESYPVTVTSGAPINITAVTQANPGVLSVAAH
GRAVGDPVLISGATGMPSINGEWLVNTVPGANTLSLKSTSGVVLDTTLLP
AYIGGGTLSYAAVVNALTTAGNLNTITIALAALATRYSVYKYFSGLWGYI
GQTSENTFVDNNITADTTRTPPIIDD
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mRNA from alignment at P-wetherbeei_contig53937:1..528-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53937.1.1 ID=mRNA_P-wetherbeei_contig53937.1.1|Name=mRNA_P-wetherbeei_contig53937.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig53937:1..528- (Phaeothamnion wetherbeei SAG_119_79)
TCGGGCGCAACGGTCAACCGCTACAAAGTCACGGCGATCGCGGCCGATGG TCTCGAAGAATCTTACCCTGTCACTGTCACGTCGGGCGCCCCCATCAACA TCACGGCGGTGACGCAGGCGAACCCCGGCGTGCTGTCGGTCGCGGCGCAC GGTCGCGCGGTCGGCGATCCGGTGCTGATTAGCGGCGCTACGGGCATGCC GTCGATCAACGGTGAGTGGTTGGTCAACACCGTGCCGGGGGCGAACACCT TATCGCTCAAGAGCACGAGCGGTGTCGTTCTCGACACGACGCTGCTGCCT GCGTATATAGGCGGCGGCACACTTAGCTATGCAGCCGTCGTGAACGCGCT GACGACCGCAGGCAATCTCAATACGATCACCATCGCGCTCGCAGCGCTTG CAACCCGCTACAGCGTTTATAAATACTTCAGCGGCCTGTGGGGCTACATC GGGCAGACGAGCGAGAACACGTTCGTCGATAACAACATCACGGCTGACAC AACGCGAACCCCGCCGATCATTGATGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53937:1..528-

>mRNA_P-wetherbeei_contig53937.1.1 ID=mRNA_P-wetherbeei_contig53937.1.1|Name=mRNA_P-wetherbeei_contig53937.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig53937:1..528- (Phaeothamnion wetherbeei SAG_119_79)
TCGGGCGCAACGGTCAACCGCTACAAAGTCACGGCGATCGCGGCCGATGG
TCTCGAAGAATCTTACCCTGTCACTGTCACGTCGGGCGCCCCCATCAACA
TCACGGCGGTGACGCAGGCGAACCCCGGCGTGCTGTCGGTCGCGGCGCAC
GGTCGCGCGGTCGGCGATCCGGTGCTGATTAGCGGCGCTACGGGCATGCC
GTCGATCAACGGTGAGTGGTTGGTCAACACCGTGCCGGGGGCGAACACCT
TATCGCTCAAGAGCACGAGCGGTGTCGTTCTCGACACGACGCTGCTGCCT
GCGTATATAGGCGGCGGCACACTTAGCTATGCAGCCGTCGTGAACGCGCT
GACGACCGCAGGCAATCTCAATACGATCACCATCGCGCTCGCAGCGCTTG
CAACCCGCTACAGCGTTTATAAATACTTCAGCGGCCTGTGGGGCTACATC
GGGCAGACGAGCGAGAACACGTTCGTCGATAACAACATCACGGCTGACAC
AACGCGAACCCCGCCGATCATTGATGAC
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