mRNA_P-wetherbeei_contig53930.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: A0A0N1C9H5_9BRAD (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodopseudomonas sp. AAP120 TaxID=1523430 RepID=A0A0N1C9H5_9BRAD) HSP 1 Score: 298 bits (763), Expect = 5.130e-98 Identity = 141/178 (79.21%), Postives = 161/178 (90.45%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
LLAIAMDQP + PRWAK+ W+RYL R+L+QFNPR RSR NVAHHYDLDGRLYSLFLD+DKQYSCAYFES D++LDDAQLAKKRH+AAKLL+ PGQRVLDIGSGWGGLG+YLAET A VTG+TLS EQLQ++N+RA+ESGLSSS +F+L DYRDVPG FDR+VSVGMFEHVG+ HYD
Sbjct: 78 LLAIAMDQPAWTPRWAKLHGWLRYLTRSLRQFNPRTRSRDNVAHHYDLDGRLYSLFLDADKQYSCAYFESADSTLDDAQLAKKRHIAAKLLVAPGQRVLDIGSGWGGLGLYLAETCGAAVTGITLSREQLQVANSRAEESGLSSSAKFILEDYRDVPGPFDRVVSVGMFEHVGVTHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: A0A0D7ET48_RHOPL (Cyclopropane-fatty-acyl-phospholipid synthase n=2 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=A0A0D7ET48_RHOPL) HSP 1 Score: 298 bits (763), Expect = 5.790e-98 Identity = 143/179 (79.89%), Postives = 160/179 (89.39%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSS-SVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
+LAIAMDQPD APRWA+ QWW+RYL R L QFNPR+R++ NVAHHYDLDGRLY LFLD+DKQYSCAYF+SPDA+LDDAQLAKKRHVAAKLL+ P RVLDIGSGWGGLG+YLAE+ ADVTG+TLS+EQLQ SNARA E GL+S S +FLL DYRD+PG FDRIVSVGMFEHVGIAHYD
Sbjct: 81 VLAIAMDQPDMAPRWARAQWWIRYLVRDLMQFNPRRRAKHNVAHHYDLDGRLYGLFLDADKQYSCAYFDSPDATLDDAQLAKKRHVAAKLLLAPSHRVLDIGSGWGGLGLYLAESCAADVTGITLSQEQLQASNARAAEKGLNSGSAQFLLQDYRDIPGPFDRIVSVGMFEHVGIAHYD 259
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: A0A336JNW7_9BRAD (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodopseudomonas pentothenatexigens TaxID=999699 RepID=A0A336JNW7_9BRAD) HSP 1 Score: 296 bits (757), Expect = 4.140e-97 Identity = 144/178 (80.90%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
LLA+AMDQPD+ PRWAK+ +RY RTL QFNPR+RSR NVAHHYDLDGRLY+LFLDSD+QYSCAYFE+PD SLDDAQLAKKRH+AAKLLI PGQRVLDIGSGWGGLG+YLA T ADVTGVTLS+EQL+ SNARA E GLS RFLL DYRDVPG FDRIVSVGMFEHVG+AHYD
Sbjct: 78 LLAVAMDQPDWTPRWAKLHGLIRYWIRTLHQFNPRRRSRHNVAHHYDLDGRLYALFLDSDRQYSCAYFETPDTSLDDAQLAKKRHIAAKLLIAPGQRVLDIGSGWGGLGLYLAGTCGADVTGVTLSQEQLEQSNARASEHGLSERARFLLQDYRDVPGPFDRIVSVGMFEHVGVAHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: Q1QL18_NITHX (Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Nitrobacter TaxID=911 RepID=Q1QL18_NITHX) HSP 1 Score: 295 bits (754), Expect = 1.180e-96 Identity = 138/178 (77.53%), Postives = 155/178 (87.08%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
+L+I +DQPD PRWAK+QWW+RYL R +QQFNPR RSR NVA HYDLDGRLYSLFLD+DKQYSCAYFE+PD +LDDAQLAKKRHV AKLL+EPGQ VLDIGSGWGGLG+YLAE AD+TGVTLS EQLQ+SNARA E L+ S +FLL DYRD+PG FDRIVSVGMFEHVG+ HYD
Sbjct: 78 VLSIILDQPDIMPRWAKLQWWLRYLVRNIQQFNPRGRSRNNVARHYDLDGRLYSLFLDADKQYSCAYFETPDTTLDDAQLAKKRHVTAKLLVEPGQTVLDIGSGWGGLGLYLAEMTGADITGVTLSTEQLQVSNARAGEKNLTQSAKFLLQDYRDIPGPFDRIVSVGMFEHVGVDHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: UPI0003B52A34 (cyclopropane-fatty-acyl-phospholipid synthase family protein n=1 Tax=Rhodopseudomonas sp. B29 TaxID=95607 RepID=UPI0003B52A34) HSP 1 Score: 294 bits (753), Expect = 1.670e-96 Identity = 141/178 (79.21%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
LLAI MDQP + P WAK+Q W RYL R++ QFNPR RSR NVAHHYDLDGRLYSLFLD+DKQYSCAYFE+PD+SLDDAQLAKKRH+AAKLL +PG RVLDIGSGWGGLG+YLAET ADVTGVTLS EQLQ+SN+RA E GLS + RFL+ DYRD+PG FDRIVSVGMFEHVG+AHYD
Sbjct: 78 LLAIVMDQPVWTPGWAKLQAWARYLTRSIAQFNPRTRSRDNVAHHYDLDGRLYSLFLDADKQYSCAYFETPDSSLDDAQLAKKRHIAAKLLPQPGHRVLDIGSGWGGLGLYLAETCGADVTGVTLSSEQLQVSNSRAAECGLSEAARFLMQDYRDIPGPFDRIVSVGMFEHVGVAHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: UPI0019841D0E (Class I SAM-dependent methyltransferase n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI0019841D0E) HSP 1 Score: 293 bits (750), Expect = 4.740e-96 Identity = 140/178 (78.65%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
LLAIA+ QPD APRWA+ QWW+RYL R +QQFNPRQRSR NVAHHYDLDGRLY+LFLD+D+QYSCAYFE+P ASLDDAQLAKKRH+AAK+LI PGQRVLDIGSGWGGLG+YLA+ ADVTGVTLS EQLQ++NAR E L +S RFLL DYRD+PG FDRIVSVGMFEHVG+ HYD
Sbjct: 78 LLAIALAQPDLAPRWARAQWWLRYLIRHVQQFNPRQRSRNNVAHHYDLDGRLYALFLDADRQYSCAYFETPFASLDDAQLAKKRHLAAKMLIAPGQRVLDIGSGWGGLGLYLAQMTGADVTGVTLSTEQLQVANARTAEQKLDNSARFLLQDYRDIPGPFDRIVSVGMFEHVGVDHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: UPI001794E19D (Class I SAM-dependent methyltransferase n=1 Tax=Rhodopseudomonas sp. TaxID=1078 RepID=UPI001794E19D) HSP 1 Score: 292 bits (747), Expect = 1.350e-95 Identity = 140/178 (78.65%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
+LAIAMDQ D AP WAK+QWW RYL R L QFNPR+R+++N +HHYDLDGRLY+LFLD+DKQYSCAYFES DA+LDDAQLAKKRHVAAKLL+ PG R+LDIGSGWGGLG+YLAE+ ADVTGVTLS+EQL+ SNARA E GL+ S RFL DYRDVPG FDRIVSVGMFEHVGIAHYD
Sbjct: 78 VLAIAMDQTDLAPGWAKLQWWFRYLGRYLIQFNPRRRAKRNASHHYDLDGRLYALFLDADKQYSCAYFESADATLDDAQLAKKRHVAAKLLVAPGHRILDIGSGWGGLGIYLAESCGADVTGVTLSDEQLRASNARAAEKGLTGSARFLAQDYRDVPGPFDRIVSVGMFEHVGIAHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: UPI001BA7E95A (cyclopropane-fatty-acyl-phospholipid synthase family protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA7E95A) HSP 1 Score: 292 bits (747), Expect = 1.350e-95 Identity = 140/178 (78.65%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
+LAIA+DQPD PRWAK+QW RY+ R +QQFNPR RSR+N+AHHYDLDGRLYSLFLD+DKQYSCAYFESPDA+LDDAQLAKKRH+AAKL++ GQRVLDIGSGWGGLG+YLAE A ADVTGVTLSEEQL ISNARA E L+ RFLL DYRD+PG FDRIVSVGMFEHVG+ +YD
Sbjct: 78 VLAIALDQPDMVPRWAKLQWLTRYILRHVQQFNPRSRSRRNIAHHYDLDGRLYSLFLDADKQYSCAYFESPDATLDDAQLAKKRHIAAKLVLARGQRVLDIGSGWGGLGLYLAEMAGADVTGVTLSEEQLAISNARATEKKLAQQARFLLQDYRDIPGPFDRIVSVGMFEHVGLDYYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: A0A7G6TXV5_9BRAD (Class I SAM-dependent methyltransferase n=7 Tax=Tardiphaga TaxID=1395974 RepID=A0A7G6TXV5_9BRAD) HSP 1 Score: 289 bits (740), Expect = 1.540e-94 Identity = 138/178 (77.53%), Postives = 154/178 (86.52%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
LLAIA++QPD APRWAK+QWW+RY+ R QQFNPR RSR NVAHHYDLD RLYSLFLD+DKQYSCAYFE PDA+LDDAQLAKKRH+AAK+LIE GQRVLDIGSGWGGLG+YLAE A+VTGVTLS EQLQ++NARA E L +FLL DYRD+PG F RIVSVGMFEHVG+ HYD
Sbjct: 78 LLAIALNQPDMAPRWAKLQWWLRYVLRHAQQFNPRTRSRNNVAHHYDLDARLYSLFLDADKQYSCAYFEGPDATLDDAQLAKKRHLAAKMLIEKGQRVLDIGSGWGGLGLYLAEMTGANVTGVTLSTEQLQVANARAGEKNLKDRAKFLLEDYRDIPGPFHRIVSVGMFEHVGVDHYD 255
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Match: A0A418VRJ1_RHOPL (Class I SAM-dependent methyltransferase n=1 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=A0A418VRJ1_RHOPL) HSP 1 Score: 289 bits (739), Expect = 2.190e-94 Identity = 137/178 (76.97%), Postives = 153/178 (85.96%), Query Frame = 1
Query: 1 LLAIAMDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLFLDSDKQYSCAYFESPDASLDDAQLAKKRHVAAKLLIEPGQRVLDIGSGWGGLGMYLAETARADVTGVTLSEEQLQISNARADESGLSSSVRFLLNDYRDVPGRFDRIVSVGMFEHVGIAHYD 534
LLA+ MDQPD+ PRW K+ W+RYL R+L QFNPR RSR NVAHHYDLDGRLYSLFLD+DKQYSCAY+ESPDASLDDAQLAKKRH+AAKLL+ G VLDIGSGWGGL +YLAET ADVTGVTLS EQLQ++ RA E GLSS+ RFLL DYRD+PG +DRIVSVGMFEHVG+ HYD
Sbjct: 78 LLAVVMDQPDWTPRWTKLHGWMRYLTRSLHQFNPRPRSRDNVAHHYDLDGRLYSLFLDADKQYSCAYYESPDASLDDAQLAKKRHIAAKLLVRAGHHVLDIGSGWGGLALYLAETCGADVTGVTLSREQLQVAGNRAAERGLSSTTRFLLEDYRDIPGPYDRIVSVGMFEHVGVTHYD 255 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53930.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53930.1.1 >prot_P-wetherbeei_contig53930.1.1 ID=prot_P-wetherbeei_contig53930.1.1|Name=mRNA_P-wetherbeei_contig53930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp MDQPDFAPRWAKMQWWVRYLARTLQQFNPRQRSRKNVAHHYDLDGRLYSLback to top mRNA from alignment at P-wetherbeei_contig53930:2..535- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53930.1.1 ID=mRNA_P-wetherbeei_contig53930.1.1|Name=mRNA_P-wetherbeei_contig53930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig53930:2..535- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53930:2..535- >mRNA_P-wetherbeei_contig53930.1.1 ID=mRNA_P-wetherbeei_contig53930.1.1|Name=mRNA_P-wetherbeei_contig53930.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig53930:2..535- (Phaeothamnion wetherbeei SAG_119_79)back to top |