mRNA_P-wetherbeei_contig53905.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: A0A5A7W3Y3_9BRAD (Lytic transglycosylase domain-containing protein n=2 Tax=Tardiphaga sp. P9-11 TaxID=2024614 RepID=A0A5A7W3Y3_9BRAD) HSP 1 Score: 275 bits (702), Expect = 6.840e-86 Identity = 139/177 (78.53%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERRAL+R+LLD+GKARLAYRVA +AAP+KETYRVDRAFMAGWIALRFLR+PQTATQ+FA I IT+GPTALARA YWLGRAA+A RN+P+AQQHYALAA H TTYYGQLACARLGCR KLRTPPTLTQAQR L RE VRAVEILY TGNR+LVVPFV L +A+D LLA++
Sbjct: 301 WVERRALVRSLLDEGKARLAYRVAQEAAPEKETYRVDRAFMAGWIALRFLRDPQTATQHFAGIPNITRGPTALARAQYWLGRAADAGRNRPAAQQHYALAAEHGTTYYGQLACARLGCRKAKLRTPPTLTQAQRVTLAGRELVRAVEILYGTGNRRLVVPFVGDLTRASDTTLLAMI 477
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: A0A257KR50_9BRAD (Murein transglycosylase n=1 Tax=Bradyrhizobiaceae bacterium PARB1 TaxID=2015576 RepID=A0A257KR50_9BRAD) HSP 1 Score: 268 bits (686), Expect = 1.330e-83 Identity = 135/177 (76.27%), Postives = 158/177 (89.27%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERRAL+R+LLDDGKA+LAYR+A +AAPDKETYRVDRAFMAGWIALRFLR+PQTAT++F +I A+T+GPTALARA YWLGRAAEA RN+ SAQQHYALAA+H TTYYGQLACAR+GCR T+LRTPP LT+ QRA +RE VRAVEILYA+GNR+LVVPFV L ++ND LLA+V
Sbjct: 292 WVERRALVRSLLDDGKAKLAYRLAQEAAPDKETYRVDRAFMAGWIALRFLRDPQTATRHFNEIPALTRGPTALARAQYWLGRAAEAGRNRGSAQQHYALAAQHGTTYYGQLACARIGCRHTRLRTPPVLTRTQRATFANREVVRAVEILYASGNRRLVVPFVGDLHRSNDTALLAMV 468
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: UPI001BAE523B (lytic transglycosylase domain-containing protein n=1 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BAE523B) HSP 1 Score: 263 bits (673), Expect = 1.010e-81 Identity = 132/177 (74.58%), Postives = 154/177 (87.01%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERRAL+R+LLDDGKARLAYR+A +AAPDKETYRVDRAFMAGWI+LRFLR+ QTAT++F +I +T+GPTALARA YWLGRAAEA RN+PSAQQHY LAA+H TTYYGQLACAR+GCR TK+R PTLT AQRA +RE VRAVEILY +GNR+LVVPFV L ++ND LLA+V
Sbjct: 287 WVERRALVRSLLDDGKARLAYRLAAEAAPDKETYRVDRAFMAGWISLRFLRDAQTATRHFNEIPGLTRGPTALARAQYWLGRAAEAGRNRPSAQQHYTLAAQHGTTYYGQLACARIGCRNTKVRAAPTLTPAQRATFANRELVRAVEILYGSGNRRLVVPFVGDLHRSNDTALLAMV 463
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: UPI001E33DA3C (lytic transglycosylase domain-containing protein n=1 Tax=Rhodopseudomonas boonkerdii TaxID=475937 RepID=UPI001E33DA3C) HSP 1 Score: 258 bits (660), Expect = 9.360e-80 Identity = 127/177 (71.75%), Postives = 157/177 (88.70%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERRAL+R+LLDDG+A+LAYR+A DAAP+KETYRVDR+FMAGWIALRFLR+PQTAT++F +I +T+GPTALARA YWLGRAA+A RN+ +AQQHYALA++H TTYYGQLACAR+GCR T+LRTPP L+ AQR L +R+ VRAVE+LYA+GNR+LVVPFV L ++ND LLA+V
Sbjct: 292 WVERRALVRSLLDDGQAKLAYRLAHDAAPEKETYRVDRSFMAGWIALRFLRDPQTATRHFNEIPGLTRGPTALARAQYWLGRAADAGRNRAAAQQHYALASQHGTTYYGQLACARIGCRHTRLRTPPALSPAQRTTLANRDLVRAVEVLYASGNRRLVVPFVGDLHRSNDTALLAMV 468
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: A0A4V1ZL72_9BRAD (Lytic transglycosylase domain-containing protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A4V1ZL72_9BRAD) HSP 1 Score: 247 bits (631), Expect = 1.300e-75 Identity = 126/177 (71.19%), Postives = 149/177 (84.18%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERRAL+R+LLDDG A+LAYR+A DAAPDKETYRVDR+FMAGWIALRFLR+ TAT++F++I +T+GPTALARA YWLGRAAEA RN+ SAQQHYA AA H TTYYGQLACAR+GCR T+LR PP A R A+ RE +RA+EILYA+GNR+LVVPFV L ++ND LLAVV
Sbjct: 276 WVERRALVRSLLDDGDAKLAYRLAHDAAPDKETYRVDRSFMAGWIALRFLRDHATATRHFSEIPGLTRGPTALARAQYWLGRAAEAGRNRASAQQHYARAAEHGTTYYGQLACARIGCRHTRLRAPPAPGAAARNAVTHRELLRAIEILYASGNRRLVVPFVGDLGRSNDTALLAVV 452
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: UPI001985B5FB (Lytic transglycosylase domain-containing protein n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI001985B5FB) HSP 1 Score: 209 bits (532), Expect = 5.700e-61 Identity = 108/174 (62.07%), Postives = 130/174 (74.71%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLL 522
W+ER AL R LLD G ARLAYR DAAP K+TY+VDRAFM GWIALRFLR+P TA +NFA+I +T PT++ARA+YW+GR A+A N SA+QHY +AA HSTTYYGQLACARLGCR T LR PP+ ++A++ R+ +RA E+LY TGNRK VV F AGL D LL
Sbjct: 295 WVERGALARQLLDGGHARLAYRTVSDAAPAKDTYQVDRAFMMGWIALRFLRDPPTAEKNFARILTVTSQPTSVARAHYWMGRTAQARHNAKSARQHYQVAAEHSTTYYGQLACARLGCRDTHLRKPPS-ADVRQASIAQRDLLRAAELLYLTGNRKQVVAFAAGLGATADRALL 467
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: A0A0Q5ZC67_9BRAD (SLT domain-containing protein n=1 Tax=Bradyrhizobium sp. Leaf396 TaxID=1736363 RepID=A0A0Q5ZC67_9BRAD) HSP 1 Score: 195 bits (495), Expect = 3.910e-56 Identity = 106/178 (59.55%), Postives = 130/178 (73.03%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAA-PDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERR L+R LLDDGKA++AYR+A DAA P +E+ RVD+ F AGWIALRFL P ATQ+FA+IA +T PT+LARA YWLGRAAEA ++ A+ HYA A+R + YYGQLA ARLG R L PP+L +RA L R+ VRAVE+LYATGN LV+PFVA L + D LL V+
Sbjct: 213 WVERRILVRRLLDDGKAQIAYRIARDAASPSRESLRVDQTFTAGWIALRFLNNPHLATQHFARIARMTTHPTSLARAAYWLGRAAEAGGDREKARGHYAAASRRTAAYYGQLASARLGRRDVSLPRPPSLGPRERANLSKRDLVRAVELLYATGNSDLVIPFVADLGRTADIGLLTVI 390
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: UPI001FD91607 (lytic transglycosylase domain-containing protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI001FD91607) HSP 1 Score: 193 bits (491), Expect = 1.820e-54 Identity = 105/178 (58.99%), Postives = 130/178 (73.03%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAA-PDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
W+ERR L+R LLDDGKA++AYR+A DAA P +E+ RVD+ F AGWIALRFL P A+Q+FA+IA +T PT+LARA YWLGRAAEA ++ A+ HYA A+R + YYGQLA ARLG R L PP+L +RA L R+ VRAVE+LYATGN LV+PFVA L + D LL V+
Sbjct: 411 WVERRILVRRLLDDGKAQIAYRIARDAASPSRESLRVDQTFTAGWIALRFLNNPHLASQHFARIARMTTHPTSLARAAYWLGRAAEAGGDREKARGHYAAASRRTAAYYGQLASARLGRRDVSLPRPPSLGPRERANLSKRDLVRAVELLYATGNSDLVIPFVADLGRTADIGLLTVI 588
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: A0A4Y3WG38_NITWI (Lytic transglycosylase n=2 Tax=Nitrobacter winogradskyi TaxID=913 RepID=A0A4Y3WG38_NITWI) HSP 1 Score: 192 bits (487), Expect = 4.380e-54 Identity = 105/178 (58.99%), Postives = 131/178 (73.60%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAA-PDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLAVV 531
WIERR L+R +LDDGKAR+AYR+A +AA P KE+ RVD+ F AGWIALRFL +P +ATQ+FA+I IT PT+LARA YWLGRAAE A+++Y AA+HS YYGQLA ARLG R +R PP L A+R AL + + V AVE+LYATGNR LVVPFVA L + D ++L ++
Sbjct: 365 WIERRILVRKMLDDGKARIAYRIARNAALPSKESLRVDQPFTAGWIALRFLHDPHSATQHFARIPQITTHPTSLARAGYWLGRAAETAGRASEARRYYKAAAQHSAAYYGQLARARLGRREIPVRRPPALDSARRMALRNVDLVHAVELLYATGNRDLVVPFVADLNRVGDVDVLTLI 542
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Match: A0A4R3U390_9BRAD (Soluble lytic murein transglycosylase n=2 Tax=Bradyrhizobium sp. Y-H1 TaxID=2485167 RepID=A0A4R3U390_9BRAD) HSP 1 Score: 189 bits (479), Expect = 1.170e-53 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 1
Query: 1 WIERRALIRALLDDGKARLAYRVAVDAA-PDKETYRVDRAFMAGWIALRFLREPQTATQNFAQIAAITKGPTALARANYWLGRAAEANRNQPSAQQHYALAARHSTTYYGQLACARLGCRTTKLRTPPTLTQAQRAALGSREQVRAVEILYATGNRKLVVPFVAGLAQANDGNLLA 525
W+ERR L+R LLDDGKA++AYR+A DAA P +E+ RVD++F AGWIALRFL +P A Q+FA+I+ +T PT+LARA YWLGRAAEA+ + AQ +YA A+R + YYGQLA ARLG R L PP L +RA L + VRAVE+LYATGN LV+PFVA + ++ D LLA
Sbjct: 233 WVERRILVRRLLDDGKAQIAYRIARDAASPSRESLRVDQSFTAGWIALRFLNDPDVAAQHFARISGMTTHPTSLARAAYWLGRAAEASGHSEKAQGYYAAASRRTAAYYGQLAGARLGRRAISLPRPPGLGPRERAKLSQNDLVRAVELLYATGNNDLVIPFVADVGRSADIGLLA 408 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53905.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53905.1.1 >prot_P-wetherbeei_contig53905.1.1 ID=prot_P-wetherbeei_contig53905.1.1|Name=mRNA_P-wetherbeei_contig53905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp WIERRALIRALLDDGKARLAYRVAVDAAPDKETYRVDRAFMAGWIALRFLback to top mRNA from alignment at P-wetherbeei_contig53905:3..533- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53905.1.1 ID=mRNA_P-wetherbeei_contig53905.1.1|Name=mRNA_P-wetherbeei_contig53905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig53905:3..533- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53905:3..533- >mRNA_P-wetherbeei_contig53905.1.1 ID=mRNA_P-wetherbeei_contig53905.1.1|Name=mRNA_P-wetherbeei_contig53905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig53905:3..533- (Phaeothamnion wetherbeei SAG_119_79)back to top |