|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 225 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 225 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186805.4911506-CDS-P-wetherbeei_contig539:295..395 | 1683186805.4911506-CDS-P-wetherbeei_contig539:295..395 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig539 296..395 - |
| 1683186805.4995565-CDS-P-wetherbeei_contig539:8370..8495 | 1683186805.4995565-CDS-P-wetherbeei_contig539:8370..8495 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig539 8371..8495 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig539.1.1 >prot_P-wetherbeei_contig539.1.1 ID=prot_P-wetherbeei_contig539.1.1|Name=mRNA_P-wetherbeei_contig539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=75bp
PVGALAGVQVPNAAAGPTADPAAAAAAAVAAAGSTGWPWPTPGHSAARSA
AGAAPAPAGPAAPAAAAASPAAGCA back to topmRNA from alignment at P-wetherbeei_contig539:296..8495- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig539.1.1 ID=mRNA_P-wetherbeei_contig539.1.1|Name=mRNA_P-wetherbeei_contig539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=8200bp|location=Sequence derived from alignment at P-wetherbeei_contig539:296..8495- (Phaeothamnion wetherbeei SAG_119_79)
CCGGTGGGCGCTCTGGCCGGTGTCCAGGTGCCGAATGCTGCTGCCGGCCC
CACCGCTGACCCTGCCGCCGCCGCCGCTGCCGCCGTCGCCGCCGCTGGGA
GCACCGGCTGGCCATGGCCGACGCCGTACTGCTCTGTGAGCAGGTGGAAG
GCCGAGCGCAAACCGATGGCGTTGGGCGTGCTGACAGCCGCAGCGTCCTC
CCGGTTGACAATGTTCCCGTCCGCGTCGCGCCCCAGTCGCACGCCGCCGC
CCATACCACCGCCGCCGCCAAAAACGCCGTTGCCGCCGATGCCGCCCACG
CCGCCCTCCCCAGCGCCGGTAGTGTCGGCTTTGGTGGGGTCGTAAACAGC
CTGCGCGCCCGCTTGCTGCATCCGCCATGTGTCCATGAAGCGGGAGCCGG
TCGTGATGAGCTCGATGCCATTCTCGTCGACGCGGCCTTCCGCCAGGTCG
ACGTACACTTCGCCGCTCTTGAGATTGTCATAGCCGACAATCGCCTTGCT
ATTGTCGAGGCCGGCCATCTGCGGCGCCGACCAGTCGACCCGCGGGTCCC
GCCGCCGGTTAGCGTTACCGCCGCTTCCGCCGCCGTAACCATCGCCGTCC
AACTCGTCGTCTACTTCGTCTTCATCCTCGTCCGAGTCGTCCGAGTCGGC
GGCAATGTTCTTGCTGATGTTCTGCAGGCCGTCGCTGTGACCTTTCATGA
CGCGGTCGCGCTCTTCGGCGTCCTCCTTGATGTCACGCGTCATTCGTTTG
AGGGCGGCGCGGCGGCAGTACACAATCACCTTCTTGCGCTCCGCCTCGAG
GGTCGACCGGAGGTTGCGTCGATGGCTGAACAATGGCAAGCAAGGAAGTC
GGAGATAACGGATGCGGCAGTGGTGAGCGGTCAGAGACGGGCACGTGAGC
AGTTGTGGCAGCGGCATGGAGGCGGTGATAGCGGCATAACGGCGGCAATG
TTGAAATAAAGTTTTCTGGACTGGGTGTTCCTGTCATCCAGCGATATGGA
GACCGAACGCAAACAAATCGAACGTGCAGCGGCAGCAGCGACCATCAGTT
GCGCCGGACGGCGGAAGAACCGCCACCAAAAACAGGAGATAAATTTAGAA
GTCAGCCTCACATGTCGTGCTGTTTCTTGAGCAGCGCCATCTTTTCGGTG
TGGGTCTCCTCTAGGCTGGCCATGGCCTTCTGCTGCTTCTCGATCATCTG
CTCCAGTCGGCTCTTGCCGCCCGCCCACGCGCTGCTCACGATGCTCTGCT
CAATTTTCTTGCGCCACCTGCCGCGCCGCCACCGTCGCCGCCATACCGCG
ATGCCACACGAGATCGCGCCGGACATTCGCCCGTTTGAAAATATGCAACT
TACAAAGGGTACAGCCTCGATGCCACCCGCTACCTTTCTGGCGTTTACAA
AGACTGCGCGTCTCCACCCGCCCCACTGCTTCTTGCACTGGACAAATGTA
GTAATGATATGTAAGAGCGCAAATGTGGCTTACCTTTCCTCGGCGGCCTG
CTCCATGGCCGATGCCTGGCGCTCAAACTCCTCCGCCTCCTCCATCCGCC
CCGTCGTTCGCAGCCGCTCAGCCTGTATCGCCGCCGATGCGACGGCGACC
CGCAAAAGAGAAGACAGGCGCTTGTTGGCGTCCAATATTTTACAAACCAA
GCATAATGTGCAACGCACTCACCAATTTAACTACCACCTAACAACAGCTA
TTACAGCTTCTCGTTTTCCTTGAACGGATGATGCATGCAGCCAACGCAAG
AAGTAGAGAAATGCCGGCTGCTGCGCTTACGTTTTGTCGGAGTCGGATGA
CGTCCTTGGTGGGCTTGCGGGTGTTGTAGGACGCACTTTTGTTGTGGCGG
CAGAGGTGCTCGCTGGTGCACGTGCAGCTCGACACGCCGCCCGTCGCCCG
TGTCGCTGTCTCCTCAATCTGCGTGCACGTTGGTCCACCTCATTCATCGT
GAAGACATGCCAAAGGAGTAACTTAAACAAAGAAGACCTTTGGTCTGAAA
ACAAAACCTGTTCATCCAGGACGCTGTACAGACAGCTTTTCTAAGGCAAG
GCGCGAAAAGCGAGCCACAAAAGGTACGCGAGCCACAAAAGGTACTTTCA
AAATTTGGTAACACGTGGAGTCTTCTGTATTATCACAGAGAGCGGAAAGA
AGAGAGTGAAGTCAGCGTAGAGAAAGGAGGAAGGGGAACAAAAGAAAGAA
GAAATGCGCACCAGCTGGTCGTATGCAGACTTGTGCTTAGCGTGGAGCTC
CTCGGCCTCTTTCTCGCAGCGCCTTCGGAGCGCCGTCTCCTCCGCCACGA
GCCGCCCCTCCAGGCCGACGATGCGCCGCCGCTGCGACATCTCGAGCCCT
GCCAGCTTTTGGTCCAAAATCTGCTTCTCTTTCTCCTCCCGGGACTGCTC
TTTCCCGAGCGCAGTTGCATCAACGACGTCATCAGAGAAGCATTTTTCCA
GAATGATAGATGCAAGGGGGAAGGGGGCAGATGGTCTGTTGTTTGGTTTA
GCGACAGAGGTGTGTCACTCGCCTCTTGACGGATATTCCTGCTTTCGTCT
TGTGGTCTTTCACAAAGCTGAGGACAAGTGCTTCTTTGCAGTTGCCCGTA
AGCACACCAATAAAACTTTGTACCCACCTCACGTAGTCGCTCGCGTTCCC
GTTCGATGGCGGCATCAATCTCCTCCACTTTGTCGAGGAACCCCATCCGG
CTCATGGCGATCCGCTCCAGCTGCAGCTCCTGCAGGTCCATCGCGGCTAT
AATCTCCGCTCTCGTTTTCTTCTTCTTCACCCGGCCGAGCCTCTCGTTCT
CTCTCTGCAGGTCTTGCTTGTTCTTGACGACGGCGTTCAAGATGCAGTTT
CTATCGCGACAAGGCGGGAAAAACGGAGAATCTGTCCTAAGATTAGATCG
GGAGCAGTGCTAGCAAAGCACACACGTAATAGATTGGATCCTGAAAGCAC
AGCATAGCCAAAAACAACCCAAAACAAAACAAAACCTCCGTCCTCTTACC
GAGTCACCTTGCGAAGCACCTCGCGCACAGTTGGCGTCATCCCACCAACA
GGCTGGACGTGCGCTTTCCTCATCCCTGCGCCCGAACGGCGTTCTGCCGA
GGAAGACGGCATGAGGCTTCAATGAGTGACCAAAGCGTGAAAATGAGACG
AGCTCTCGATGTTTCACGTCGAGCGTCGCGGGATGTGGATTGAAGGAGAG
AGATTCTTTCCCACTTGCACCTCACAACCGCTGTGACCGCTCTTTCAATT
AACGGTTTCGAACGTTTCCTCGCACAATCGCAATAACATAAACATGATCA
CCTCATTCGTTTCTCTCCTTTCAGTGTCCTCTCAACCTACTTCTCCGTTT
CTGCTGGATAGAAGGCAGGTACCTCCCACCTCTCGCTATTCCAGGCGGTA
TGGAACCCCTTTCAGCAGCGACCATGTTGTGGCCAAACAGCGCGAGAAAG
ACGCAAGCCTTGAAAGCCAATTTTCCCTACAGCAGACTGAGTTGGATCAG
GACGAAATGCCTTTGGCAGCGGCCCTGGCTACAGCGGCGGGCCGAGTGCG
GGCGCCTTTCTTCTTCCCAGGGCACAAGATGGGACGCGGGGCGGCGAGGC
CGTTTATAGACGACGTGCTGGGCGGCCACCCCGAAATGCTAGGTCGCGAC
TTGCCAGAGCTGAAGGAGCTGGGCAACCTCTTTGCCCATGACGACGACGG
TCCCATCCAGCAGGCAGAAGCCTTGGCTGCAGCTGCGTTCGGCGCAAAGC
GCACGTGGTTCCTCGCGAACGGCAGCACCGCCGGCGTTATCGCCGCCGTC
CTCGCCTGCGTGCAGTGGCACCGCCACTGCGACGGCCAACGAAGGCAGCA
GGTGGAGGAGCCACGCAGTGTGGTCGTCCTGCCCCGCAACGTCCACAAGT
CGGCGATTCAGGCGCTCATCCTCACCGGCGCCTCACCCGCCTTCCTGATG
CCGCGCTACGACCCCGAATTCGACATCTGCCACGGCGTCGACATCGAAAC
GGACCTGCCGGCGGCGCTGGCGATGCACGGCCCAGACGTGGCGGCCGTCC
TGCTCGTCTCGCCAACCTACCACGGCGCCGTAACGGACGTAACGGCCGCT
GCGCGCTTCTGCCGCGCCGTCGGTGTGCCCCTTATCGTCGACGAGGCGCA
CGGCGGACACTTGCAGTTCCTCCACAAGAAACTGCCGCCGGATCCGACAG
GACAGCCAGCAATAGTTGCGGCGGCGGCAGTGGCGGCGGCGACGGCGGCG
GCGGTAGGAAAAGCGGCAGGCGACACATCTGGCTTTCCGTTTCCGGCGTG
TCCTCCTGGAGCACTGCAGGGTGGCGCTGACTTAGTGGTGCAGAGCGCGC
ACAAGACGCTTACCTCGCTCACGCAGAGCGCCCTGCTGCACCTGGGGCCC
GACGGCTTCTTCGGCACGCCAACGACGCCCGAAACTGCCAGCAGCGGAGA
AAGAAAGGAGGAGGAAGGCGAAAATGACGGCGGCTTTTCCATCCGCCGGG
CGGTGGAAGCGGCGCTGGAGATGGTGCAGAGCACCAGCCCGAGCTACGTG
CTGCTGGCCTCGCTGGACGCCGCCCGCTGGCAGCTGGCGAGCACCAGGCG
GCCGGGAGTCGCCCTGCTGCAGCGGGCGGCCGCGGCGGCGGCGGCGGCAC
GGGCGCGGATCGCGCATATCGACGGGCTGGCGGTCCTCGGGCCTGAAAGC
GTATCAGCGACAGTTGCAGCAACGGCGGCAACAATGGTAGCGGCGACGAC
GCCAGTAGTGACATCGGTGGCGACGGCGGCGGCGACGACGGCGGGGACAA
AGGTTCCAAGAGTAGCAGCTGTGGCAAAAGTAGCGACGGCAGCGGCGACG
GCGGGGGCAGTGGAATCGTGCTGGTTGGATCCGCTCCGCATCACCGTGCG
AATCGGTGACCGTAACGACGTTGGCGCAAACGGCCGCACGATGATGATGA
GCGGTTATGAGGCCGATGACATCATGATAGCACAGTTCGGCGTCTACGCT
GAGCTGCCTATGGAACGGACAGTCATGTTCGCTTTTGGGCCTGGCTCTGC
CGACGCAGACGTCGATTTGCTGGTCGAGGCGCTCGAATACGTGGCCTCCG
TCGCTCGGGATCGGAGGTGCAGTGCCATTGCCACCGCAGCGACTCCAGCA
GGCTCATTTTCGGATGCTGACGGAGTGGGTGCCACCGTCTCTGATGCTAC
CCTCGCCACCGCAGCAGCAGCAACAAACGCTGCCGCAAGTGCGGGCGGCG
TTGTCTTCCCCAGCAGCACTGTGCGGCGGCAACTGCGTACACCGCGTGAG
GCCTTCTTTTCGCGTGCAGAAACCGTCGCGGCGGCCGACGCGGTGGGGCG
AGCGAGCGCCGAGACGGTGTGTCCCTACCCGCCGGGCATTCCGGCGTTGC
TTCCGGGCGAAGAGGTGACGGCGGAGTGTCTGGAAGACCTGAGGCGGCTG
GCGGCGGCGGGCGGCAGCTTCGTCGTCACAGGCTGCGCCGACCCAAGCCT
CGCCACGCTGCGGGTCCTCATGAGCACTCGAAAGCTTATATAAAGCTTGC
TAAGAACGCGAATAAAAGAAACTGAAAGCCCTCAACGAGGCGGTCTTGGC
GATTGATGCTGCTTCGAAAGAGGTACACATTCGCCTGTTTTGTTTCGCGC
CTCTCTCTTTTGGGCGGACATTACTCACACTGATGGAGAAGTAGTTTATG
TTTACTGTCAATGGTATACTACTCTTTTGACCGACCTTTTCACACAGGCA
ACTACAAAATTTCTGGGACCGGTGATCCAGCGAGCGAGTCGCCCGCCGCC
CGTCTCTCTCTACGGGCGGGAGAGCGACGCTGCGATAGCTTTGCTCAATT
CCTCGTCATCCACGTCCACCAGCCCCAAATCACCCCACGCCAGCGCCGCC
ATCGCCTCATCCGAGAAGCCGTCCTCGCCGCAGCGGCCGCGGTTTGCGCC
GCTGCCGTTACCTCCGCCGCCGTCCTCCTTCAAAGACAGGGCGAGCGCGG
CCGCCAACTCGGGGTCTTCGGCATCCGCCGCGATCCCTGCGGCGACCCCA
GCGAGCGCAGCGGACAGCCGCAGCGCCTGCTGCAGCTCGGCGTCCTCGTC
CGCCGCCGCCGGCACCCCGCGCAGCGACGCCCGGATGGCTGAGTCAAGGT
CGTCCGCGTCCGCTCCGGTCATCGCCATCCCCGCCACCGGCCCCGCCACC
GGCCCTGCCGTCGGCCCCACCACCGCCAACGCCGGTGACGATGCCGCGGC
TGTTGACCCGCCCTCCTTGCTGGTGGCTGTGAAGGAAGCGCCGGCAGCGG
CAGCGCCCGCAGCGCCGGCGCCTGCTAGCCCCGGGCCGCCGGAGGTCGAA
TGGACTATCATTGAGGCCCGAAGTGCCTTCTGCAGCTGATCCTCCTCGCT
CTGCGTCTGGGCGCTGCGCAGCATCTGCTCCTGCAGCGCGATGAGCTCTG
AATCCTGCGCCACCGCAGCGACGTTGGCTGCCTCTTGCCTCTCGATGTGC
TCCATGCTGCCGGGCGCAGGAGAGAAGTGCCAGTCGTAAGTTTTCAGTGG
CGGGCGGGAGGGAAAGCGGTTCGGTGAAAGAAAACAGCTGCAATGCGGCC
TTGAATCGTCAAAAATCAACCCACACCAGCGAATAGACGACGAGTTGAAC
CAACAAACAGGGCTTGGCAGATCCGCCAGCTTTTAACCCCAGCCCAGGAA
AGACAACGGGCGAAGCTAGAAGCAAGCCAGCTAGCTGATTACGCTGGCGC
AAACACGTGCCAGAAGCGTGCCGCAAATGTGGCCCCGATCAGCAACCCTA
GCTGAAAAACCCTTGTGCAAAGATCGATTGTTGAAGAAAGCGTCTTCCCA
GCCGCCTTCCTCACCTAGCGCAGAGGGCGCCCTCGAGGTCGTCGAACTGG
GCGTCAAACTCGTCGCGGCTCGATAGCAACGCCAAATCCAGCGCCGCCTG
TTCTGTTGCCAACTCGTCGCTCCGCCGCGACACGGCCTCCAGCAGACCAC
CCCCACTCCTTGCGCTCTCCGCCGCCGCCGCCGCCGACGACGACGCGCCG
CCACCGCCGCCGCCGCCGCCGTTGCTGCCGAGGGCGCCGGCCACGCGGGC
GCGGGAACGGGCAATGGCCTCATCCTCGACGGCGCCCGGTGGGTGGCGCT
CGTGTGCCGGCAGGTCCGTGCAAGAGACAACGGAGTCGTAGTGGCCGCCG
CCGTAGTAGCTGAGGCGGACGGGCGGCATCCGCTTGGAGCCGCCCGTCTC
GTGGAAGGTGCGGAGCATCTTGGCGCCCTCCGCGGCGTCGTACGCCCAAA
TCTCCGCCGCCCGGTTGTACATTTCGCATAGCGCCTGGCAAAAGATCGAC
GCGGCAATGGCCGAAAGAAGTTCCTTCAGAGGTATGCGGCGCAAAAGCGT
CTCCTTCAGCAGGTCAACAAGACCGCGATGAAACCTTCTATCCCGTCAAA
TAGCTGTCATTGCTAGGAAAGGATAACTGCATTCCAATGCAGTTCCTGCA
CACCTTTTCCTTCCTCTCTCCTCCAACACACGAAACGGACCGCAGAACAG
GGCGGGACTGGACAGAACAGCAATGAAGAGGATCAGAAACGGGACTTTAC
TGTACCTGGACCTCGGGGTCGTCGCCCCAGACAGCGTTGCGGCGCTTCAT
GTCGACGTAGCGCAAAAAGCCATCCATGCCGCCCTCCACGTACGGCTCGA
AGTAGTGCCGCTCGCTCTCCATGTAGTCCATGCACTTGGCGCGGACCAGT
GCATGGTGCCTTTCAAGAAAGAGGTTATGTAAAGCAGGCAAAGCGATGCC
GCAGGCAGGGGCAGCGAATTGATATTCAGCCACTGACGCTTGAAGCGTTC
TTTACAGCAGGGGTTACATAGTTCTAAAAAGAGAGGATAGAAGCACTAAA
TCTGCTTTCCAGGAAAAGCCACAGAAATTTCTTGCCAGAAGGGCGTCCTT
CTCCGTTTTCCCCTATTCCTCCTCTTACGCTCTCACCGATCGTCGCCGTA
GATCTGATGGCTGACGCTGCGGAACAGACAGTTGCCGTCGCCCTGCACCG
GGTGGATGACCAACTCCCGCTTGAGCAGCGCGGACAGGTAGTGGCCATAG
CGGTCACTCAGCGGCACGATCTGCCGCCGGTGCTGCTCCGGCTCCGGCTG
GCCCGGCTGCCCCGGCAGCAGCGGCAGCGTCGCCAGCCGCCGGCTGCGCT
back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig539:296..8495- >mRNA_P-wetherbeei_contig539.1.1 ID=mRNA_P-wetherbeei_contig539.1.1|Name=mRNA_P-wetherbeei_contig539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=225bp|location=Sequence derived from alignment at P-wetherbeei_contig539:296..8495- (Phaeothamnion wetherbeei SAG_119_79)
CCGGTGGGCGCTCTGGCCGGTGTCCAGGTGCCGAATGCTGCTGCCGGCCC
CACCGCTGACCCTGCCGCCGCCGCCGCTGCCGCCGTCGCCGCCGCTGGGA
GCACCGGCTGGCCATGGCCGACGCCCGGTCACTCAGCGGCACGATCTGCC
GCCGGTGCTGCTCCGGCTCCGGCTGGCCCGGCTGCCCCGGCAGCAGCGGC
AGCGTCGCCAGCCGCCGGCTGCGCT back to top
|