mRNA_P-wetherbeei_contig5386.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5386.1.1
Unique NamemRNA_P-wetherbeei_contig5386.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A7S2RZ89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ89_9STRA)

HSP 1 Score: 265 bits (678), Expect = 4.600e-80
Identity = 187/393 (47.58%), Postives = 222/393 (56.49%), Query Frame = 2
Query:    5 PAAPRDAEDAVPE-------VEWWDEAFVDRDMRARRQRGEAGLDEWTTAALYGGASLENARTFAYVQHPAPDGG-GPREEAPALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKA------ARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDLCL 1141
            P AP+ A   V +       VEWWD AF+  D R               AA Y  A L N++  A V HPAP    G  E+ P LPV LT KERKR+RRQAR+ER  E  DKIALGL+PA EPK+KL+NFMKVLG+QAVADPSK+E+ VM+Q+  R + HEM N+A+ LTP+ER+ KK R+L EDTS++V VAV+RV    L + +H+FKVD NAQQ  +TG VL CK         +  VVVEGGPKAIK Y+RLMLRRIQW   G                                 XXXXXXXXXXX G  G T   R                          C+LVW G V +R FNAFRFQEC S   ARKVM  +GV HYWD+ L
Sbjct:  220 PVAPKPAASLVGQTQSVPHSVEWWDVAFLPSDKRK------------DAAAAYDLAKLTNSKFHALVVHPAPTKPLGYDEKGPQLPVFLTKKERKRIRRQAREERRNEMLDKIALGLMPAPEPKLKLANFMKVLGDQAVADPSKIEKKVMEQVQQRVMNHEMRNMAQKLTPQERKDKKRRKLTEDTSRQVVVAVYRVK--DLSNQQHQFKVDMNAQQNSLTGGVLTCKGDVIQGEPNLSLVVVEGGPKAIKRYSRLMLRRIQWTEEGE-------------------------------DXXXXXXXXXXXAGEAGRTRNNR--------------------------CDLVWTGTVVRRSFNAFRFQECKSGAAARKVMESKGVAHYWDMVL 541          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A5D6XZ83_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ83_9STRA)

HSP 1 Score: 260 bits (664), Expect = 3.420e-77
Identity = 167/404 (41.34%), Postives = 219/404 (54.21%), Query Frame = 2
Query:    8 AAPRDAEDAVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAPDGGGPR--EEAPALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDLCLLRGRVAGAAIGG--PGTSG 1192
            A P   E  VP++EWWD  ++ +D RA   +      ++  +  T A  Y    ++   T   ++HPA      +  EE   LP+ LT  ERK++RRQ R +RE+EKQDKIALGLLP  EPK+KLSN M+VL +QAVADPS +ER V +Q+  R+  HEM NLAR LTPEERR KK R+++ED + ++HVAVFRV    L +P+HRFKVD NAQQ+++TG VL CK      VVVEGG KAIK+YTRL+ +RI W    +   GG                                                           S    + +        C LVWQG+V ++ F  FRFQEC S ETARKVM  +GV  YWDL +++   +G A GG   G+SG
Sbjct:  289 AVPPPPEAPVPDIEWWDIEYLPKDKRAVVDKFGFLKAKSRKEHPTVAVAYIDMKIKFCGTLHVIEHPARVSSLVKKDEEPVVLPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLADQAVADPSAIERKVREQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVP--DLSNPQHRFKVDVNAQQYHLTGGVLICKEENANMVVVEGGKKAIKHYTRLLTKRIDWLGDADDSYGGD----------------------------------------------------------SDDXDDESKQRRRSNSCSLVWQGIVARKAFTNFRFQECRSVETARKVMEAKGVVQYWDL-VVQSTGSGDARGGIAEGSSG 631          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A8K1CCE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCE6_PYTOL)

HSP 1 Score: 257 bits (657), Expect = 2.250e-76
Identity = 158/374 (42.25%), Postives = 205/374 (54.81%), Query Frame = 2
Query:   35 VPEVEWWDEAFVDRDMRARRQRG-----EAGLDEWTTAALYGGASLENARTFAYVQHPAPDGGGPRE--EAPALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
             P+VEWWD  ++ +D +A   +      +A  D       Y     +   T   ++HPA      ++  E  A+P+ LT  ERK++RRQ R ERE+EKQDKIA+GL+P  EPK+KLSN MKVLGEQAVADPS +ER V QQ+  R+  HEM NLAR LTPEERR KK R+++ED + ++HVAVFRV    L +P+HRFKVD NAQQ+++TG VL CK   +  ++VEGG KAIK+YTRL+ +RI+W   G                                                G+ A                      +  N   C LVWQG+V +R FN FRFQEC +A TARKVM  + V HYWDL
Sbjct:  292 TPDVEWWDIEYLPKDKKAAVDKFGFIKVQARKDNPEITIEYAEMKAKFCGTLHVIEHPARLNPAFKQDTEPVAIPLMLTAAERKKIRRQNRAEREKEKQDKIAIGLMPPPEPKVKLSNMMKVLGEQAVADPSAIERKVRQQMAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVP--DLANPQHRFKVDVNAQQYHLTGGVLICKEDNINVIIVEGGRKAIKHYTRLLTKRIRWNDNGT-----------------------------------------------GDDA-------------XXXXXXXXXNAENTSGCVLVWQGIVARRAFNNFRFQECRTATTARKVMETKNVVHYWDL 603          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A2D4CF61_PYTIN (U4/U6 small nuclear ribonucleoprotein Prp3, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF61_PYTIN)

HSP 1 Score: 254 bits (649), Expect = 1.420e-75
Identity = 172/384 (44.79%), Postives = 218/384 (56.77%), Query Frame = 2
Query:   26 EDAVPEVEWWDEAFVDRDMR------------ARRQRGEAGLDEWTTAALYGGASLENARTFAYVQHPAPDGGGPREEAP--ALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
            E   P+VEWWD  ++ ++ R            AR++R +  +      A Y G       T   ++HPA      +++    A+P+ LT  ERK++RRQ R ERE+ KQD IALGL+P  EPK+KLSN MKVLGEQAVADPS VER V QQ+  R+  HEM NLAR LTPEERR KK ++++ED S ++H AVFRV+   L +P+HRFKVD NAQQ+++TG VL CK   V  VVVEGG KAIK+YTRLM +RI+W     +  G XXXXXXX                                           A +T G          ADD      C LVWQG+V +R FN FRFQEC+++ TARKVM  + V HYWDL
Sbjct:  244 ESTTPDVEWWDLDYLPKEKRDAMDKFGFIKAQARKERADITVSYTXMKAKYCG-------TLHVIEHPARVKPIVKQDTTPVAIPLMLTAAERKKIRRQNRAEREKXKQDXIALGLMPPPEPKVKLSNMMKVLGEQAVADPSAVERKVRQQMAQREKNHEMRNLARKLTPEERREKKLKKIKEDASGDIHAAVFRVS--DLSNPQHRFKVDXNAQQFHLTGGVLCCKQNNVTMVVVEGGRKAIKHYTRLMTKRIRWR---EQADGDXXXXXXX-------------------------------------------ADSTDG----------ADDTGKDSGCALVWQGIVAKRAFNNFRFQECSTSVTARKVMEAKHVVHYWDL 562          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: K3W6M6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6M6_GLOUD)

HSP 1 Score: 256 bits (653), Expect = 1.680e-75
Identity = 168/377 (44.56%), Postives = 215/377 (57.03%), Query Frame = 2
Query:   26 EDAVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAPDGG-GPREEAPA-LPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
            E   P+VEWWD  ++ +D R    +      ++  +       Y    ++   T   ++HPA       ++E P  LP+ LT  ERK++RRQ R +RE+EKQDKIALGLLP  EPK+KLSN M+VL +QAVADPS +ER V QQ+  R+  HEM NLAR LTPEERR KK R+++ED + ++HVAVF+V    L +P+HRFKVD NAQQ+++TG VL CK   +  VVVEGG KAIK+YTRL+ +RIQW A    G   XXXXXXXXXX                                                        A+   N   C+LVWQGVV ++ F  FRFQEC +A TARKVM  +GV HYWDL
Sbjct:  317 ESQTPDVEWWDIEYLPKDKRVNVDKFGLIKAKSRKENPEITVTYTEMKIKYCGTMHVIEHPARVASIVKKDEGPVVLPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLADQAVADPSAIERKVRQQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFKVP--DLSNPQHRFKVDVNAQQFHLTGGVLICKEDNLNMVVVEGGKKAIKHYTRLLTKRIQWLASSEHGDSXXXXXXXXXXX--------------------------------------------------------AESKGNG--CKLVWQGVVARKAFTTFRFQECRTAATARKVMEAKGVVHYWDL 633          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A662WEV1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEV1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 8.680e-75
Identity = 157/381 (41.21%), Postives = 209/381 (54.86%), Query Frame = 2
Query:   14 PRDAEDAVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAP-DGGGPREEAP-ALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
            P   E A P+VEWWD  ++ +D RA   +      +   +       Y    L+   T   ++HPA  +    R++ P A+P+ LT  ERK++RRQ R +RE+EKQDKIALGLLP  EPK+KLSN M+VL EQAVADPS +ER V QQ+  R+  HEM NLAR LTPEERR KK R+++ED + ++HVA+F+V    L +P+HRFKVD NAQQ+++TG V+ CK   +  VVVEGG KA+K+YT+L+++RI W                                                  +  E A +RG                         C+LVWQGV  ++ FN FRFQEC +A TARKVM  + V HYWDL
Sbjct:  295 PPKPEMATPDVEWWDVEYLTKDKRALMDKFGFIKAKVRKENPEATVAYADMKLKCCGTVHVIEHPARLNLIVKRDDGPVAVPLMLTTAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVRQQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVALFKVP--DLSNPQHRFKVDVNAQQYHLTGGVIICKEDNINVVVVEGGKKAVKHYTKLLMKRIDW---------------------------------------LETRDADHDSDSEAEDAASRGNG-----------------------CQLVWQGVAARKAFNNFRFQECRTAITARKVMEAKNVVHYWDL 611          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: D0MZE8_PHYIT (U4/U6 small nuclear ribonucleoprotein Prp3, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0MZE8_PHYIT)

HSP 1 Score: 253 bits (645), Expect = 1.670e-74
Identity = 163/377 (43.24%), Postives = 208/377 (55.17%), Query Frame = 2
Query:   32 AVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAPDGGGPREEAP--ALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPL--CELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
            + PEVEWWD  ++ +D RA   +       A  +       Y    L+   T   V+HPA      R +    A+P+ LT  ERK++RRQ R +RE+EKQDKIALGLLP  EPK+KLSN M+VL EQAVADPS +ER V +QI  R+  HEM NLAR LTPEERR KK R+++ED + ++HVA+F+V    L +P+HRFKVD NAQQ+++TG VL CK + +  VVVEGG KAIK YT+LM+RRI W                                                        GAR A             ++ D+DA      C LVWQGVV ++ FN FRFQEC ++ TARKVM  + V HYWDL
Sbjct:  298 STPEVEWWDVEYLPKDKRAVVDKFGFIKARARKENPDVTVSYADMKLKYCGTAHVVEHPARLNLIIRHDNKPVAVPLMLTAVERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVREQIAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVALFKVP--DLSNPQHRFKVDVNAQQYHLTGGVLICKDSNINMVVVEGGKKAIKQYTKLMIRRIDWN-------------------------------------------------------GAREAEHES---------DSEDEDATKRGNGCLLVWQGVVARKAFNNFRFQECRTSVTARKVMEAKNVVHYWDL 608          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A421H1J6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H1J6_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.740e-74
Identity = 163/381 (42.78%), Postives = 213/381 (55.91%), Query Frame = 2
Query:   14 PRDAEDAVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAP-DGGGPREEAP-ALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
            P   E A P+VEWWD  ++ ++ R    +      +   +    A  Y    L+   T   V+HPA  +    R++AP ++P+ LT  ERK++RRQ R +RE+EKQDKIALGLLP  EPK+KLSN M+VL EQAVADPS +ER V +Q+  R+  HEM NLAR LTPEERR KK R++++D + ++HVA+F+V    L +P+HRFKVD NAQQ+++TG VL CK + +  VVVEGG KAIK+YT+LMLRRI W                                                        G R A        S + G  A   +N   C LVWQGVV ++ FN FRFQEC +  TARKVM  + V HYWDL
Sbjct:  299 PPKPEMATPDVEWWDVEYLRKEKRGMVDKFGFIKAKIRNENPGVAIAYADMKLKYCGTVHVVEHPARLNLIVKRDDAPVSVPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVREQMAQREKNHEMRNLARKLTPEERREKKLRKIKQDAAGDIHVALFKVP--DLSNPQHRFKVDVNAQQYHLTGGVLICKDSNINMVVVEGGKKAIKHYTKLMLRRIDW-------------------------------------------------------QGTREAEQD-----SDSEGEDASQRSNG--CLLVWQGVVARKAFNNFRFQECRNTTTARKVMEAKNVVHYWDL 615          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: A0A6A3TVC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TVC5_9STRA)

HSP 1 Score: 251 bits (642), Expect = 5.240e-74
Identity = 161/383 (42.04%), Postives = 213/383 (55.61%), Query Frame = 2
Query:   14 PRDAEDAVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAP-DGGGPREEAP-ALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDA--NVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDL 1135
            P   E + P+VEWWD  ++ +D RA   +      +   ++      Y    L+   T   ++HPA  +    +++ P A+P+ LT  ERK++RRQ R +RE+EKQDKIALGLLP  EPK+KLSN M+VL EQAVADPS +ER V +QI  R+  HEM NLAR LTPEERR KK R+++ED + ++HVAVF+V    L +P+HRFKVD NAQQ+++TG VL CK   +  VVVEGG KAIK YT+LM+RRI W                                                 G++                 +    ++ D+DA      C LVWQGVV ++ FN FRFQEC +A TARKVM  + V HYWDL
Sbjct:  298 PPKPETSTPDVEWWDVEYLPKDKRAMVDKFGFIKAKVRKEDPGATVCYTDMKLKYCGTAHVIEHPARLNLIVKQDDKPVAVPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVREQIAQRENNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFKVP--DLSNPQHRFKVDVNAQQYHLTGGVLICKDGNINMVVVEGGKKAIKQYTKLMMRRIDW------------------------------------------------QGSHE----------------AEQESDSEDEDAAKRGNGCLLVWQGVVARKAFNNFRFQECRTAVTARKVMEAKSVVHYWDL 614          
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Match: H3GNM0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNM0_PHYRM)

HSP 1 Score: 251 bits (640), Expect = 7.780e-74
Identity = 164/399 (41.10%), Postives = 214/399 (53.63%), Query Frame = 2
Query:   14 PRDAEDAVPEVEWWDEAFVDRDMRARRQR-----GEAGLDEWTTAALYGGASLENARTFAYVQHPAP-------DGGGPREEAPALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKVLGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQEDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVGAVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGTYGETAGARGASATFGGGGSATFGNAADDDA--NVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYWDLCLLRGRVAGAA 1168
            P   E A P+VEWWD  ++ +D RA   +      +   +       Y    L+   T   ++HPA        D     ++  ++P+ LT  ERK++RRQ R +RE+EKQDK+ALGLLP  EPK+KLSN M+VL EQAVADPS +ER V +QI  R+  HEM NLAR LTPEERR KK R+++ED + ++HVA+F+V    L +P+HRFKVD NAQQ+++TG VL CK + +  VVVEGG KAIK YT+LM+RRI W                                                        GAR A             ++ D+DA      C LVWQGVV ++ FN+FRFQEC +  TARKVM  + V HYWDL       A AA
Sbjct:  285 PPKTEMATPDVEWWDVEYLPKDKRAMVDKFGFIKAKVLKENPDATVSYTEMKLKYCGTVHVIEHPARLNLIIKHD-----DKPVSVPLMLTAVERKKIRRQNRADREKEKQDKVALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVREQIAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVALFKVP--DLSNPQHRFKVDVNAQQYHLTGGVLICKDSDINTVVVEGGKKAIKQYTKLMMRRIDW-------------------------------------------------------QGAREAEQES---------DSEDEDAAKRGNGCLLVWQGVVARKAFNSFRFQECRTTVTARKVMEAKNVVHYWDLVEKSAEAAAAA 612          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5386.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RZ89_9STRA4.600e-8047.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XZ83_9STRA3.420e-7741.34Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CCE6_PYTOL2.250e-7642.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CF61_PYTIN1.420e-7544.79U4/U6 small nuclear ribonucleoprotein Prp3, putati... [more]
K3W6M6_GLOUD1.680e-7544.56Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662WEV1_9STRA8.680e-7541.21Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D0MZE8_PHYIT1.670e-7443.24U4/U6 small nuclear ribonucleoprotein Prp3, putati... [more]
A0A421H1J6_9STRA3.740e-7442.78Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A6A3TVC5_9STRA5.240e-7442.04Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
H3GNM0_PHYRM7.780e-7441.10Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5386contigP-wetherbeei_contig5386:2662..3878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T000617
PFAMsDUF1115,PRP3
Model size1217
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.5e-71
EggNOG OGsKOG2769@1|root,KOG2769@2759|Eukaryota,1MGK4@121069|Pythiales
DescriptionU4 U6 small nuclear ribonucleoprotein Prp3. Source PGD
Cds size1128
COG categoryA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186805.1409922-UTR-P-wetherbeei_contig5386:2661..26711683186805.1409922-UTR-P-wetherbeei_contig5386:2661..2671Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5386 2662..2671 -
1683186805.1611469-UTR-P-wetherbeei_contig5386:3799..38781683186805.1611469-UTR-P-wetherbeei_contig5386:3799..3878Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5386 3800..3878 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186805.1521003-CDS-P-wetherbeei_contig5386:2671..37991683186805.1521003-CDS-P-wetherbeei_contig5386:2671..3799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5386 2672..3799 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5386.1.1prot_P-wetherbeei_contig5386.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5386 2672..3799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5386.1.1

>prot_P-wetherbeei_contig5386.1.1 ID=prot_P-wetherbeei_contig5386.1.1|Name=mRNA_P-wetherbeei_contig5386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=376bp
MRARRQRGEAGLDEWTTAALYGGASLENARTFAYVQHPAPDGGGPREEAP
ALPVHLTDKERKRVRRQARQEREREKQDKIALGLLPAAEPKMKLSNFMKV
LGEQAVADPSKVERLVMQQIGARKVKHEMANLARALTPEERRAKKARRLQ
EDTSQEVHVAVFRVALAALEDPRHRFKVDKNAQQWYMTGAVLACKAARVG
AVVVEGGPKAIKYYTRLMLRRIQWGAGGNRGPGGGTGGGSGGGGDDSGND
SGDDAEDDEGDGVGGGGGDGIGMGTYGETAGARGASATFGGGGSATFGNA
ADDDANVPLCELVWQGVVKQRGFNAFRFQECTSAETARKVMAQRGVPHYW
DLCLLRGRVAGAAIGGPGTSGDMAL*
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mRNA from alignment at P-wetherbeei_contig5386:2662..3878-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5386.1.1 ID=mRNA_P-wetherbeei_contig5386.1.1|Name=mRNA_P-wetherbeei_contig5386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1217bp|location=Sequence derived from alignment at P-wetherbeei_contig5386:2662..3878- (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGGCGGCGCCGCGGGATGCGGAAGATGCGGTGCCAGAGGTGGAGT GGTGGGACGAGGCGTTCGTGGACCGGGACATGCGCGCGCGGCGGCAGCGC GGCGAGGCCGGGCTGGATGAGTGGACGACGGCAGCGCTCTACGGTGGCGC ATCGCTGGAGAACGCGCGGACCTTTGCATACGTTCAGCACCCGGCACCGG ACGGCGGCGGGCCGCGGGAGGAGGCGCCGGCGCTGCCGGTGCACCTGACG GACAAGGAGCGCAAACGGGTGCGACGGCAGGCGCGGCAGGAGCGCGAACG CGAGAAGCAGGACAAAATCGCCCTTGGCCTGCTGCCGGCGGCGGAGCCCA AGATGAAGCTCAGCAATTTCATGAAGGTTTTGGGCGAGCAGGCCGTCGCC GACCCGAGCAAAGTCGAGCGGCTCGTCATGCAGCAGATCGGTGCCCGCAA GGTCAAGCACGAGATGGCCAACCTGGCGCGGGCGCTGACGCCCGAGGAGC GGCGCGCCAAGAAGGCGCGGCGGCTGCAAGAGGACACGAGCCAGGAGGTG CACGTGGCGGTGTTTCGGGTGGCGCTGGCGGCGCTCGAGGACCCACGTCA CCGCTTCAAGGTGGACAAGAACGCACAGCAGTGGTACATGACGGGCGCCG TGCTTGCGTGCAAGGCGGCGCGGGTCGGCGCCGTGGTGGTGGAGGGCGGG CCCAAGGCAATAAAGTACTACACGCGCCTCATGCTGCGCCGCATCCAGTG GGGGGCCGGCGGCAACAGGGGTCCTGGTGGTGGCACCGGTGGCGGTTCTG GCGGCGGCGGCGATGACAGCGGCAATGACAGCGGCGACGACGCCGAGGAT GACGAGGGGGATGGCGTTGGCGGTGGTGGCGGTGACGGGATTGGGATGGG CACTTACGGCGAAACGGCAGGTGCAAGAGGTGCGAGCGCCACGTTTGGCG GCGGCGGCAGCGCTACGTTCGGCAACGCGGCGGACGACGACGCAAATGTC CCGCTGTGCGAGCTGGTGTGGCAGGGTGTGGTGAAGCAGCGCGGCTTCAA TGCCTTCCGCTTTCAGGAGTGCACGTCGGCCGAAACGGCCCGCAAGGTCA TGGCACAGCGCGGCGTCCCACACTACTGGGACCTGTGCCTGCTCCGCGGC CGAGTGGCAGGAGCCGCTATTGGCGGCCCAGGAACCAGCGGCGACATGGC GCTGTAATGGAATCCCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5386:2662..3878-

>mRNA_P-wetherbeei_contig5386.1.1 ID=mRNA_P-wetherbeei_contig5386.1.1|Name=mRNA_P-wetherbeei_contig5386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1128bp|location=Sequence derived from alignment at P-wetherbeei_contig5386:2662..3878- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGCGCGGCGGCAGCGCGGCGAGGCCGGGCTGGATGAGTGGACGAC
GGCAGCGCTCTACGGTGGCGCATCGCTGGAGAACGCGCGGACCTTTGCAT
ACGTTCAGCACCCGGCACCGGACGGCGGCGGGCCGCGGGAGGAGGCGCCG
GCGCTGCCGGTGCACCTGACGGACAAGGAGCGCAAACGGGTGCGACGGCA
GGCGCGGCAGGAGCGCGAACGCGAGAAGCAGGACAAAATCGCCCTTGGCC
TGCTGCCGGCGGCGGAGCCCAAGATGAAGCTCAGCAATTTCATGAAGGTT
TTGGGCGAGCAGGCCGTCGCCGACCCGAGCAAAGTCGAGCGGCTCGTCAT
GCAGCAGATCGGTGCCCGCAAGGTCAAGCACGAGATGGCCAACCTGGCGC
GGGCGCTGACGCCCGAGGAGCGGCGCGCCAAGAAGGCGCGGCGGCTGCAA
GAGGACACGAGCCAGGAGGTGCACGTGGCGGTGTTTCGGGTGGCGCTGGC
GGCGCTCGAGGACCCACGTCACCGCTTCAAGGTGGACAAGAACGCACAGC
AGTGGTACATGACGGGCGCCGTGCTTGCGTGCAAGGCGGCGCGGGTCGGC
GCCGTGGTGGTGGAGGGCGGGCCCAAGGCAATAAAGTACTACACGCGCCT
CATGCTGCGCCGCATCCAGTGGGGGGCCGGCGGCAACAGGGGTCCTGGTG
GTGGCACCGGTGGCGGTTCTGGCGGCGGCGGCGATGACAGCGGCAATGAC
AGCGGCGACGACGCCGAGGATGACGAGGGGGATGGCGTTGGCGGTGGTGG
CGGTGACGGGATTGGGATGGGCACTTACGGCGAAACGGCAGGTGCAAGAG
GTGCGAGCGCCACGTTTGGCGGCGGCGGCAGCGCTACGTTCGGCAACGCG
GCGGACGACGACGCAAATGTCCCGCTGTGCGAGCTGGTGTGGCAGGGTGT
GGTGAAGCAGCGCGGCTTCAATGCCTTCCGCTTTCAGGAGTGCACGTCGG
CCGAAACGGCCCGCAAGGTCATGGCACAGCGCGGCGTCCCACACTACTGG
GACCTGTGCCTGCTCCGCGGCCGAGTGGCAGGAGCCGCTATTGGCGGCCC
AGGAACCAGCGGCGACATGGCGCTGTAA
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