mRNA_P-wetherbeei_contig53846.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53846.1.1
Unique NamemRNA_P-wetherbeei_contig53846.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: UPI001FEB0D3F (UMP kinase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001FEB0D3F)

HSP 1 Score: 282 bits (722), Expect = 2.920e-94
Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVATDTP 477
            NA AIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEK RIVIFAGGTGNPFFTTDTTAALRALEIGAE ILMAKNAVEGV+ ADPR+ P A LIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNM DERNIGRLLEGERIGTMV T++P
Sbjct:  101 NALAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKRRIVIFAGGTGNPFFTTDTTAALRALEIGAECILMAKNAVEGVLSADPRVDPSATLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMGDERNIGRLLEGERIGTMVVTESP 259          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: UPI001FE89C72 (UMP kinase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001FE89C72)

HSP 1 Score: 281 bits (719), Expect = 8.360e-94
Identity = 144/158 (91.14%), Postives = 151/158 (95.57%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVATDT 474
            NA AIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEK R+VIFAGGTGNPFFTTDTTAALRALEIGAE ILMAKNAVEGV+DADPR+VP A+LIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNM DE NIGRLL+GERIGTMV T++
Sbjct:  101 NALAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKGRVVIFAGGTGNPFFTTDTTAALRALEIGAECILMAKNAVEGVLDADPRVVPDARLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMGDESNIGRLLDGERIGTMVVTES 258          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A538IS36_9ACTN (Uridylate kinase n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538IS36_9ACTN)

HSP 1 Score: 232 bits (591), Expect = 1.410e-74
Identity = 115/156 (73.72%), Postives = 136/156 (87.18%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVAT 468
            NA A+QDALEKLG  TRVQSAI + EVAEPYIRRRAIRHLE+ RIVIFA GTGNPFFTTDT AALRALE+ AEA+LMAKN VEGV DADPR+ PGA+ +P ++H +AIER L+VMD+TAL+LCMDN LPI+VFNM+DE NI R++ GER+GT+V+T
Sbjct:   89 NALALQDALEKLGAVTRVQSAIEVSEVAEPYIRRRAIRHLERGRIVIFAAGTGNPFFTTDTAAALRALEMHAEALLMAKNGVEGVYDADPRVTPGARFLPEVTHRQAIERRLEVMDSTALSLCMDNSLPIYVFNMDDEANIDRIVCGERVGTLVST 244          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7W0LUP2_9ACTN (Uridylate kinase n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0LUP2_9ACTN)

HSP 1 Score: 230 bits (586), Expect = 1.050e-73
Identity = 119/157 (75.80%), Postives = 132/157 (84.08%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVATD 471
            NA A+QDALEK G  TRVQSAI + EVAEPYIRRRA+RHLE  R+VIFA GTGNPFFTTDT AALRALEI AEAILMAKN VEGV  ADPR VP A+ IP ISH EAIE+ L+VMD TAL+LCMDN LPI VFNM+DERNI R++ GER+GT+VATD
Sbjct:   95 NALALQDALEKAGAITRVQSAITISEVAEPYIRRRAMRHLEHGRVVIFAAGTGNPFFTTDTAAALRALEIHAEAILMAKNGVEGVFSADPRKVPDAKFIPAISHREAIEQQLQVMDVTALSLCMDNNLPIHVFNMDDERNIDRIVCGERVGTVVATD 251          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7J9YSM7_9ACTN (Uridylate kinase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YSM7_9ACTN)

HSP 1 Score: 228 bits (580), Expect = 6.000e-73
Identity = 116/157 (73.89%), Postives = 133/157 (84.71%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVATD 471
            NA  +QDALE+LG  TRV SAI + EVAEPYIRRRAIRHLEK R+VIFA GTGNPFFTTDT AALRALEI AEAILMAK+ VEGV DADP  VP A+ +P I+HMEAIE+GL+VMD+TAL+LCMDN LPI VFNM DERNI R++ GER+GT+V T+
Sbjct:   84 NALTLQDALERLGAHTRVLSAIEVTEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRALEIHAEAILMAKHGVEGVYDADPSQVPEARFLPEITHMEAIEKGLRVMDSTALSLCMDNALPIHVFNMADERNIDRIVSGERVGTIVRTN 240          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7V9CCG2_9ACTN (Uridylate kinase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9CCG2_9ACTN)

HSP 1 Score: 227 bits (579), Expect = 8.520e-73
Identity = 113/156 (72.44%), Postives = 133/156 (85.26%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVAT 468
            NA  +QDALE++G+ TRVQSA+ + EVAEPYIRRRA+RHLEK R+VIFAGGTGNPFFTTDT AALRA+E+ AEAILMAKN VEGV  ADPR  P A+L+  ISH EAI+RGLKVMD TALTLC +NG PI VFNM+DERNI R++ GER+GT+V+T
Sbjct:   84 NALPLQDALEQIGVRTRVQSALTIAEVAEPYIRRRAMRHLEKGRVVIFAGGTGNPFFTTDTAAALRAVEVKAEAILMAKNGVEGVYTADPRTDPSAELLHEISHTEAIQRGLKVMDATALTLCRENGTPIHVFNMDDERNIDRIVSGERVGTLVST 239          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7W0MUM0_9ACTN (Uridylate kinase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W0MUM0_9ACTN)

HSP 1 Score: 227 bits (578), Expect = 1.290e-72
Identity = 115/156 (73.72%), Postives = 132/156 (84.62%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVAT 468
            NA A+QDALEK G  TRVQSAI + EVAEPYIRRRA+RHLEK R+VIFA GTGNPFFTTDT AALRA+EI AEAILMAKN VEGV+ ADPR   GAQLIP ISHM+A+ RGL+VMD TALTLC +N +P+ VFNM+DERNI R++ GER+GT+V T
Sbjct:   85 NALALQDALEKQGANTRVQSAITISEVAEPYIRRRAMRHLEKGRVVIFAAGTGNPFFTTDTAAALRAVEIHAEAILMAKNGVEGVLSADPREDAGAQLIPEISHMDALRRGLRVMDYTALTLCAENQMPLHVFNMDDERNIERIVSGERVGTVVIT 240          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7V9HPF2_9ACTN (Uridylate kinase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9HPF2_9ACTN)

HSP 1 Score: 227 bits (579), Expect = 1.560e-72
Identity = 115/156 (73.72%), Postives = 132/156 (84.62%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVAT 468
            NA  +QDALEK G  TRV SAI++ EVAEPYIRRRA+RHLEK+RIVIFA GTGNPFFTTDT A+LRALEI AE ILMAK+ VEGV DADP LVP A  +P ISH EAIERGLKVMD+TAL+LCMDN LPI+VFNM DE NI R++ GER+GT+V++
Sbjct:   87 NALTLQDALEKQGSHTRVMSAISVTEVAEPYIRRRAVRHLEKDRIVIFAAGTGNPFFTTDTAASLRALEIHAEVILMAKHGVEGVYDADPALVPDASFLPEISHREAIERGLKVMDSTALSLCMDNDLPIYVFNMADETNIARIVRGERVGTLVSS 242          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7V9F083_9ACTN (Uridylate kinase n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9F083_9ACTN)

HSP 1 Score: 227 bits (578), Expect = 1.660e-72
Identity = 119/157 (75.80%), Postives = 132/157 (84.08%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVATD 471
            NA A+QDALEKLG  TRV SAI + EVAEPYIRRRA+RHLE+ RIVIFA GTGNPFFTTDT AALRALEI AEAILMAKN VEGV  ADPR VP A+ IP ISH EAIER L+VMD TAL+LCMDN LPI VFNM+DE NI R++ GER+GT+V+TD
Sbjct:   94 NALALQDALEKLGAITRVLSAIEISEVAEPYIRRRAMRHLERGRIVIFAAGTGNPFFTTDTAAALRALEIHAEAILMAKNGVEGVYTADPRKVPDAEFIPAISHREAIERQLQVMDVTALSLCMDNRLPIHVFNMDDELNIDRIVCGERVGTVVSTD 250          
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Match: A0A7V8WA69_9ACTN (Uridylate kinase n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V8WA69_9ACTN)

HSP 1 Score: 226 bits (577), Expect = 2.510e-72
Identity = 115/156 (73.72%), Postives = 132/156 (84.62%), Query Frame = 1
Query:    1 NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAGGTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIPRISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERIGTMVAT 468
            NA A+QDALEKLG  TRVQSAI + EVAEPYIRRRAIRHLEK R+VIFA GTGNPFFTTDT AALRALEI AE ILMAKN VEGV DADP   P A+ +P ++H EAIER L+VMD+TAL+LCMDN +PI VFNM+DERNI R++ GER+GT+V+T
Sbjct:   98 NALALQDALEKLGADTRVQSAITISEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRALEIHAEVILMAKNGVEGVFDADPAQTPDARFLPAVTHREAIERRLQVMDSTALSLCMDNEVPIHVFNMDDERNIDRIVCGERVGTVVST 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53846.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FEB0D3F2.920e-9491.82UMP kinase n=1 Tax=Miltoncostaea oceani TaxID=2843... [more]
UPI001FE89C728.360e-9491.14UMP kinase n=1 Tax=Miltoncostaea marina TaxID=2843... [more]
A0A538IS36_9ACTN1.410e-7473.72Uridylate kinase n=2 Tax=Actinomycetia bacterium T... [more]
A0A7W0LUP2_9ACTN1.050e-7375.80Uridylate kinase n=1 Tax=Thermoleophilaceae bacter... [more]
A0A7J9YSM7_9ACTN6.000e-7373.89Uridylate kinase n=1 Tax=Solirubrobacterales bacte... [more]
A0A7V9CCG2_9ACTN8.520e-7372.44Uridylate kinase n=1 Tax=Solirubrobacterales bacte... [more]
A0A7W0MUM0_9ACTN1.290e-7273.72Uridylate kinase n=1 Tax=Solirubrobacterales bacte... [more]
A0A7V9HPF2_9ACTN1.560e-7273.72Uridylate kinase n=1 Tax=Solirubrobacterales bacte... [more]
A0A7V9F083_9ACTN1.660e-7275.80Uridylate kinase n=1 Tax=Thermoleophilaceae bacter... [more]
A0A7V8WA69_9ACTN2.510e-7273.72Uridylate kinase n=1 Tax=Thermoleophilaceae bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53846contigP-wetherbeei_contig53846:53..535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1380390.JIAT01000010_gene4534
Preferred namepyrH
PFAMsAA_kinase
Model size483
Max annot lvl84995|Rubrobacteria
KEGG rclassRC00002
KEGG koko:K09903
KEGG ReactionR00158
KEGG Pathwayko00240,ko01100,map00240,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.23e-72
EggNOG OGsCOG0528@1|root,COG0528@2|Bacteria,2GKWQ@201174|Actinobacteria,4CPH9@84995|Rubrobacteria
EC2.7.4.22
DescriptionCatalyzes the reversible phosphorylation of UMP to UDP
Cds size483
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186805.078086-CDS-P-wetherbeei_contig53846:52..5351683186805.078086-CDS-P-wetherbeei_contig53846:52..535Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53846 53..535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53846.1.1prot_P-wetherbeei_contig53846.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53846 53..535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53846.1.1

>prot_P-wetherbeei_contig53846.1.1 ID=prot_P-wetherbeei_contig53846.1.1|Name=mRNA_P-wetherbeei_contig53846.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp
NARAIQDALEKLGLTTRVQSAIAMQEVAEPYIRRRAIRHLEKNRIVIFAG
GTGNPFFTTDTTAALRALEIGAEAILMAKNAVEGVMDADPRLVPGAQLIP
RISHMEAIERGLKVMDTTALTLCMDNGLPIFVFNMNDERNIGRLLEGERI
GTMVATDTPG*
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mRNA from alignment at P-wetherbeei_contig53846:53..535-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53846.1.1 ID=mRNA_P-wetherbeei_contig53846.1.1|Name=mRNA_P-wetherbeei_contig53846.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig53846:53..535- (Phaeothamnion wetherbeei SAG_119_79)
AACGCCCGGGCGATCCAGGACGCGCTGGAGAAGCTGGGACTGACGACCCG TGTCCAGTCGGCGATCGCGATGCAGGAGGTGGCCGAGCCCTACATCCGCC GCCGCGCGATCCGCCACCTGGAGAAGAACCGGATCGTCATCTTCGCCGGG GGCACCGGCAACCCGTTCTTCACCACCGACACGACGGCGGCGTTGCGGGC GCTGGAGATCGGCGCGGAGGCCATCCTGATGGCCAAGAACGCCGTGGAGG GCGTGATGGACGCCGATCCGCGCCTTGTGCCCGGCGCGCAGCTGATCCCC CGCATCAGCCACATGGAGGCCATCGAGCGCGGCCTCAAGGTGATGGACAC CACGGCTCTCACGCTCTGCATGGACAATGGCCTGCCGATCTTCGTCTTCA ACATGAACGACGAGCGCAACATCGGACGGCTGCTGGAGGGTGAGCGCATC GGCACCATGGTCGCCACCGATACCCCTGGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53846:53..535-

>mRNA_P-wetherbeei_contig53846.1.1 ID=mRNA_P-wetherbeei_contig53846.1.1|Name=mRNA_P-wetherbeei_contig53846.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig53846:53..535- (Phaeothamnion wetherbeei SAG_119_79)
AACGCCCGGGCGATCCAGGACGCGCTGGAGAAGCTGGGACTGACGACCCG
TGTCCAGTCGGCGATCGCGATGCAGGAGGTGGCCGAGCCCTACATCCGCC
GCCGCGCGATCCGCCACCTGGAGAAGAACCGGATCGTCATCTTCGCCGGG
GGCACCGGCAACCCGTTCTTCACCACCGACACGACGGCGGCGTTGCGGGC
GCTGGAGATCGGCGCGGAGGCCATCCTGATGGCCAAGAACGCCGTGGAGG
GCGTGATGGACGCCGATCCGCGCCTTGTGCCCGGCGCGCAGCTGATCCCC
CGCATCAGCCACATGGAGGCCATCGAGCGCGGCCTCAAGGTGATGGACAC
CACGGCTCTCACGCTCTGCATGGACAATGGCCTGCCGATCTTCGTCTTCA
ACATGAACGACGAGCGCAACATCGGACGGCTGCTGGAGGGTGAGCGCATC
GGCACCATGGTCGCCACCGATACCCCTGGATGA
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