mRNA_P-wetherbeei_contig53823.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53823.2.1
Unique NamemRNA_P-wetherbeei_contig53823.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A1H8NAL4_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8NAL4_9PROT)

HSP 1 Score: 112 bits (280), Expect = 5.160e-28
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V ELAK      + + VDGYL +GG+ D  + QQ  FD+   M+A+GRKL EAE       QHQAQRWTFIGSG+SHPNFLGTV+ ++P + ++LA++AP F
Sbjct:  201 VAELAKGMPEAEIVSCVDGYLEIGGMIDDGLKQQALFDLAAMMKASGRKLGEAEHATLAEQQHQAQRWTFIGSGMSHPNFLGTVQQLSPASGKRLAEIAPVF 302          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A4R6X274_9PROT (Uncharacterized protein n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6X274_9PROT)

HSP 1 Score: 110 bits (276), Expect = 2.050e-27
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  LA    A  +A AVDGY+++G   D  +AQQ+KFD+E+F +ATGR+L   EQ  F+ VQHQA RWTFIGSG++H NF+GT+  +AP   +++ +VAPAF
Sbjct:  202 VAHLAARTDAAGIAEAVDGYMSIGAFLDAGLAQQSKFDLESFQEATGRRLGADEQETFLNVQHQALRWTFIGSGMTHQNFIGTLGQMAPDGRKRVEEVAPAF 303          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A6A0IGG1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6A0IGG1_9BACT)

HSP 1 Score: 103 bits (258), Expect = 7.710e-25
Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  LA+   AE+LA AVDGYL +GG  D  + QQ  FD++ F +ATGRKL EAE+ + + VQ QA RWT++G+G++HP  L +V  + P   EKL +VAPAF
Sbjct:  192 VEALAEGLDAEALARAVDGYLEIGGFIDAGLEQQMLFDLDAFERATGRKLTEAEREKAVAVQRQANRWTYLGTGMTHPELLRSVERMGPALREKLEKVAPAF 293          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A6C1SRX2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SRX2_9PROT)

HSP 1 Score: 102 bits (254), Expect = 3.490e-24
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 1
Query:   46 AVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            A+D YLT+GG  D  + QQ  FD+ +F++ATGR++ + E+ EF  VQHQA RWTF+GSG++HPNFL +V AI  GA +KL   AP F
Sbjct:  216 AMDDYLTIGGFLDQGLNQQVAFDLGSFVRATGRRMTDEEEAEFTTVQHQANRWTFLGSGMTHPNFLESVGAIREGARQKLEAAAPCF 302          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A3D0NXF5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A3D0NXF5_9BACT)

HSP 1 Score: 100 bits (249), Expect = 1.540e-23
Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = 1
Query:   10 LAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            LA   S + +   V  YL +GG  D  + QQT FD+E F  ATGR L EAE+  F+ VQHQA RWT++G+G+SHP FL TV A+ P   EKL +V PAF
Sbjct:  192 LAAGMSEKQIKEGVADYLDIGGFLDTGLKQQTLFDLEAFEAATGRTLTEAEREAFITVQHQANRWTYLGTGMSHPKFLETVGALDPAEREKLEEVVPAF 290          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A3A0EVT9_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0EVT9_9PROT)

HSP 1 Score: 98.6 bits (244), Expect = 1.050e-22
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  +AKDR A+ +A A+DGYL +G + DG + QQT FD++ F +A  R+L+  E   F+  QHQA RWTF+G+G+SH  FL TV ++AP    +L  + PAF
Sbjct:  203 VETIAKDRDADGIAKAIDGYLEIGMLLDGGLKQQTIFDVDAFCRAAQRRLDAEELEAFVNHQHQAMRWTFLGTGMSHRRFLQTVESLAPAQRARLEGIVPAF 304          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A2E5KTP9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KTP9_9PROT)

HSP 1 Score: 94.0 bits (232), Expect = 3.340e-22
Identity = 46/102 (45.10%), Postives = 67/102 (65.69%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  LA+  S   +A  VD Y  +G + D  +A+Q K+  ++F +AT R L+E E  +FM VQHQA RWT++GSG++HPNFL T+  +A    E++ +VAPAF
Sbjct:   60 VEALAEGLSPREIAETVDEYFQIGEMLDQGLAKQVKYGADSFTKATERNLSEWEHKQFMAVQHQANRWTYLGSGMTHPNFLATIDQLASEQRERIEEVAPAF 161          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A0T2QEC6_9SPHN (Uncharacterized protein n=3 Tax=Erythrobacteraceae TaxID=335929 RepID=A0A0T2QEC6_9SPHN)

HSP 1 Score: 96.3 bits (238), Expect = 7.690e-22
Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  LA+ R   S+ +A+D YL +G   DG +  Q + +++ F +A GR+L E E+G  +  QHQA RWT++GSG++HP F+ T+ AI+P A +++A+VAPAF
Sbjct:  201 VEALAEGRDEASIQSALDEYLEIGMFLDGGLKTQAELNLDAFEKAVGRQLGEDERGALIAQQHQALRWTYLGSGMTHPKFVATLAAISPAARDRIAEVAPAF 302          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: A0A2V8QI16_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8QI16_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 7.690e-22
Identity = 45/102 (44.12%), Postives = 71/102 (69.61%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  +A +R+ E +   V+ YL +GG  DG + QQ +FDM + M ATGR  +EA++ EF  VQ QA RWT++GSG++HP  L T+ +++P A++++A+V+ AF
Sbjct:  201 VESMAANRTEEEILKGVEEYLEIGGFIDGGLTQQVEFDMASLMDATGRYFDEAQKEEFRHVQRQANRWTYLGSGMTHPKVLETLESLSPKAKQRVAEVSIAF 302          
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Match: UPI001658567D (diiron oxygenase n=1 Tax=Sphingomonas sp. JC676 TaxID=2768065 RepID=UPI001658567D)

HSP 1 Score: 94.4 bits (233), Expect = 4.120e-21
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 1
Query:    1 VMELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLNEAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPAF 306
            V  LA+ RS   + AA+DGYL +G   D  +A QT+ ++  F + TGR L   E+  F+  QHQA RWT++GSG+ HP F  T+ AI+P A +++  VAPAF
Sbjct:  201 VEALAEGRSPAEIDAALDGYLEIGSFLDNGLASQTELNLAAFERVTGRTLGPDERDAFLAAQHQAARWTYLGSGMVHPRFRATLGAISPAARDRIDAVAPAF 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53823.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8NAL4_9PROT5.160e-2852.94Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
A0A4R6X274_9PROT2.050e-2751.96Uncharacterized protein n=1 Tax=Dongia mobilis Tax... [more]
A0A6A0IGG1_9BACT7.710e-2550.98Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A6C1SRX2_9PROT3.490e-2454.02Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A3D0NXF5_9BACT1.540e-2351.52Uncharacterized protein (Fragment) n=1 Tax=Blastoc... [more]
A0A3A0EVT9_9PROT1.050e-2247.06Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A2E5KTP9_9PROT3.340e-2245.10Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A0T2QEC6_9SPHN7.690e-2244.12Uncharacterized protein n=3 Tax=Erythrobacteraceae... [more]
A0A2V8QI16_9BACT7.690e-2244.12Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
UPI001658567D4.120e-2145.10diiron oxygenase n=1 Tax=Sphingomonas sp. JC676 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53823contigP-wetherbeei_contig53823:224..535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog450851.PHZ_c1673
Model size312
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.74e-19
EggNOG OGs2CCCK@1|root,2Z7UH@2|Bacteria,1R3SV@1224|Proteobacteria,2UH90@28211|Alphaproteobacteria
Cds size309
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186804.8442628-CDS-P-wetherbeei_contig53823:223..5321683186804.8442628-CDS-P-wetherbeei_contig53823:223..532Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53823 224..532 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186804.8535173-UTR-P-wetherbeei_contig53823:532..5351683186804.8535173-UTR-P-wetherbeei_contig53823:532..535Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig53823 533..535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53823.2.1prot_P-wetherbeei_contig53823.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53823 224..532 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53823.2.1

>prot_P-wetherbeei_contig53823.2.1 ID=prot_P-wetherbeei_contig53823.2.1|Name=mRNA_P-wetherbeei_contig53823.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
MELAKDRSAESLAAAVDGYLTLGGIFDGAVAQQTKFDMETFMQATGRKLN
EAEQGEFMLVQHQAQRWTFIGSGISHPNFLGTVRAIAPGAEEKLAQVAPA
FA*
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mRNA from alignment at P-wetherbeei_contig53823:224..535-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53823.2.1 ID=mRNA_P-wetherbeei_contig53823.2.1|Name=mRNA_P-wetherbeei_contig53823.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig53823:224..535- (Phaeothamnion wetherbeei SAG_119_79)
GTGATGGAGCTGGCCAAGGACCGCTCGGCCGAGAGCCTGGCGGCAGCGGT CGACGGCTATCTGACCCTGGGCGGCATCTTCGATGGCGCGGTGGCGCAGC AGACGAAGTTCGACATGGAGACCTTCATGCAGGCGACCGGCCGCAAGCTG AACGAAGCGGAGCAGGGCGAGTTCATGCTGGTCCAGCATCAAGCGCAGCG CTGGACCTTCATCGGTTCCGGCATCAGCCATCCGAACTTCCTCGGCACCG TGCGGGCGATCGCACCCGGCGCGGAAGAGAAGCTGGCGCAGGTCGCGCCG GCCTTTGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53823:224..535-

>mRNA_P-wetherbeei_contig53823.2.1 ID=mRNA_P-wetherbeei_contig53823.2.1|Name=mRNA_P-wetherbeei_contig53823.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig53823:224..535- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCTGGCCAAGGACCGCTCGGCCGAGAGCCTGGCGGCAGCGGTCGA
CGGCTATCTGACCCTGGGCGGCATCTTCGATGGCGCGGTGGCGCAGCAGA
CGAAGTTCGACATGGAGACCTTCATGCAGGCGACCGGCCGCAAGCTGAAC
GAAGCGGAGCAGGGCGAGTTCATGCTGGTCCAGCATCAAGCGCAGCGCTG
GACCTTCATCGGTTCCGGCATCAGCCATCCGAACTTCCTCGGCACCGTGC
GGGCGATCGCACCCGGCGCGGAAGAGAAGCTGGCGCAGGTCGCGCCGGCC
TTTGCCTGA
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