mRNA_P-wetherbeei_contig53815.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53815.1.1
Unique NamemRNA_P-wetherbeei_contig53815.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig53815.1.1 vs. uniprot
Match: A0A849RZL2_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A849RZL2_9GAMM)

HSP 1 Score: 76.3 bits (186), Expect = 3.250e-15
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:   22 TGLLAFKTMKTAIEAGDWKKAAASCHRKGPSEARNNWARDRFLESA 159
            TGL  FKT+K A+E+GDWKKA+ +CHRKGPSE RNNW RD FLE+A
Sbjct:  243 TGLHQFKTLKAAVESGDWKKASENCHRKGPSEERNNWTRDLFLEAA 288
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BLAST of mRNA_P-wetherbeei_contig53815.1.1 vs. uniprot
Match: A0A7Y5UKL2_9BURK (Uncharacterized protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7Y5UKL2_9BURK)

HSP 1 Score: 66.2 bits (160), Expect = 1.200e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   25 GLLAFKTMKTAIEAGDWKKAAASCHRKGPSEARNNWARDRFLESA 159
            GLL FK ++ A+EAG W +AAA CHR GPSE RN+W RD FLE+A
Sbjct:  207 GLLKFKKLEAAVEAGQWTEAAAQCHRVGPSEERNDWTRDLFLEAA 251
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BLAST of mRNA_P-wetherbeei_contig53815.1.1 vs. uniprot
Match: A0A5B9EFZ7_9BACT (Uncharacterized protein n=1 Tax=Terriglobus albidus TaxID=1592106 RepID=A0A5B9EFZ7_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.350e-7
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:   22 TGLL-AFKTMKTAIEAGDWKKAAASCHRKGPSEARNNWARDRFL 150
            TGLL A+  +  AI AGDWK AAA CHR GP+ ARN W R +FL
Sbjct:  136 TGLLQAYPKLLHAIVAGDWKTAAAECHRSGPAPARNEWTRQQFL 179
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BLAST of mRNA_P-wetherbeei_contig53815.1.1 vs. uniprot
Match: A0A3P5XF32_9RHOB (Uncharacterized protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A3P5XF32_9RHOB)

HSP 1 Score: 47.4 bits (111), Expect = 6.780e-5
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 1 
Query:   25 GLLAFKTMKTAIEAGDWKKAAASCHRKGPSEARNNWARDRFLESA 159
            GL  F+ ++ AI  GDW++AA   HR GPSE RN +  D F+++A
Sbjct:  133 GLAQFRMLRQAILDGDWEEAAEQSHRNGPSEERNRYVFDLFIDAA 177
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53815.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A849RZL2_9GAMM3.250e-1571.74Uncharacterized protein n=1 Tax=Methylococcaceae b... [more]
A0A7Y5UKL2_9BURK1.200e-1164.44Uncharacterized protein n=1 Tax=Burkholderiaceae b... [more]
A0A5B9EFZ7_9BACT1.350e-761.36Uncharacterized protein n=1 Tax=Terriglobus albidu... [more]
A0A3P5XF32_9RHOB6.780e-546.67Uncharacterized protein n=2 Tax=Rhodobacteraceae T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53815contigP-wetherbeei_contig53815:366..530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267534.KB906759_gene1687
Preferred nameVP1109
PFAMsPhage_lysozyme
Model size165
Max annot lvl2|Bacteria
KEGG koko:K01185
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.37e-06
EggNOG OGsCOG3772@1|root,COG3772@2|Bacteria
EC3.2.1.17
Descriptioncytolysis by virus of host cell
Cds size165
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186804.8191764-CDS-P-wetherbeei_contig53815:365..5301683186804.8191764-CDS-P-wetherbeei_contig53815:365..530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53815 366..530 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53815.1.1prot_P-wetherbeei_contig53815.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53815 366..530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53815.1.1

>prot_P-wetherbeei_contig53815.1.1 ID=prot_P-wetherbeei_contig53815.1.1|Name=mRNA_P-wetherbeei_contig53815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=55bp
MGSASKNTGLLAFKTMKTAIEAGDWKKAAASCHRKGPSEARNNWARDRFL
ESAP*
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mRNA from alignment at P-wetherbeei_contig53815:366..530-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53815.1.1 ID=mRNA_P-wetherbeei_contig53815.1.1|Name=mRNA_P-wetherbeei_contig53815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig53815:366..530- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTTCGGCTTCGAAGAACACCGGGCTGCTGGCCTTCAAGACGATGAA
GACCGCGATCGAGGCCGGCGACTGGAAGAAGGCCGCCGCGTCGTGCCACC
GCAAAGGCCCTTCCGAAGCGCGCAACAACTGGGCGCGTGACCGCTTTCTC
GAGTCTGCGCCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53815:366..530-

>mRNA_P-wetherbeei_contig53815.1.1 ID=mRNA_P-wetherbeei_contig53815.1.1|Name=mRNA_P-wetherbeei_contig53815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig53815:366..530- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTTCGGCTTCGAAGAACACCGGGCTGCTGGCCTTCAAGACGATGAA
GACCGCGATCGAGGCCGGCGACTGGAAGAAGGCCGCCGCGTCGTGCCACC
GCAAAGGCCCTTCCGAAGCGCGCAACAACTGGGCGCGTGACCGCTTTCTC
GAGTCTGCGCCATGA
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