mRNA_P-wetherbeei_contig538.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A836CLC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC2_9STRA) HSP 1 Score: 190 bits (482), Expect = 6.660e-55 Identity = 120/220 (54.55%), Postives = 142/220 (64.55%), Query Frame = 3
Query: 417 SSMYGSSSMYGGGXX--------YGXXXXXXXXXXXXXXXYNRYGMGAGLGVGSP--GPMGEQYAWLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVGNALAALQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAF---RIVRGIHNR--LNPRSA-VPLLRQTAFEDVYRAGQRRSLPPLAPRPPAAGGFAAGEAWE 1028
+S YG S YGGG X YG XXXXXXXXX +R GM G MG Q++WLHS+QHFTSS+GYLTELLGMNTQAIGFF+GN M F+E+ G ALA+LQPWREFP GHPRHGEPPPTAEEER+RV+RVRVLRW L +AYA F R++RG R L R+A +L +TA E+++ G RS P A R P + W
Sbjct: 2 ASSYGGMSSYGGGMXXXXXXXXXYGGSSYGGXXXXXXXXXXSRMGMXXXXXXXXXMEGGMGPQFSWLHSIQHFTSSMGYLTELLGMNTQAIGFFVGNLMSFIENAGLALASLQPWREFPPGHPRHGEPPPTAEEERRRVTRVRVLRWVASLLIAYAGFKLLRLLRGAPQRRALTHRAAPTRMLAETAMENIFSGG--RSAPQSA-RAPVMPAVDLSDPWS 218
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A6H5KL98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL98_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.200e-52 Identity = 91/149 (61.07%), Postives = 111/149 (74.50%), Query Frame = 3
Query: 516 NRYGMGAGLGVGSPGPMGEQYAWLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVGNALAALQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAV-PLLRQTAFEDVYRAGQR 959
+RYGMG G M QY+WLHS+QHFTSSLGYLTE+LGMNTQAIGF N MGFLEH+GN+L ++QPWREFP GHPRHGEPPPT EEER+R+SR+RVLR+A+ L +AYA FR R +H ++ R P + Q + ED+Y QR
Sbjct: 253 SRYGMGGMGXXXXXGGMDHQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRASRALHRLISGRHRPRPAIAQASLEDIYSLQQR 401
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: D8LEW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW3_ECTSI) HSP 1 Score: 125 bits (315), Expect = 6.670e-31 Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 3
Query: 675 NAMGFLEHVGNALAALQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAV-PLLRQTAFEDVYRAGQRRSLPPLAPRPPAAGGFA 1010
N MGFLEH+GN+L ++QPWREFP GHPRHGEPPPT EEER+R+SR+RVLR+A+ L +AYA FR+ R +H ++ R P + Q + ED+Y QR + R AA G A
Sbjct: 14 NLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGGGNGRANAAAGAA 126
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A7S2UWF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF4_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.050e-22 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 3
Query: 585 LHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVGNALAALQPWR-EFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFR 863
LH SLG LTELLGMNT A+G + +G LE V + ++ LQPW+ +FP GHPRHGEP PT EEER+R+ R+RVLR+ F AY A++
Sbjct: 5 LHGFHQAIMSLGQLTELLGMNTHALGQLGSSCLGILEAVSSFISHLQPWQPDFPPGHPRHGEPQPTPEEERRRIHRLRVLRFFTACFAAYLAYK 98
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A6A3UN19_9STRA (Peroxin-13 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UN19_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.970e-20 Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 3
Query: 516 NRYGMGAGLGVGSPGPMGEQYAWLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVG----NALAALQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAVPLL 917
+R G G +G G P G WL S SS+G +TELLGMN +A+ F +G+ + FLE +G A L P FP GHPRHGEPP T EEE+ RV RVR+ ++ V + A++ +R + RL ++ LL
Sbjct: 159 SRMGYGXMMGGGMMDPNGGGLGWLSSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPVFPPGHPRHGEPPATEEEEKSRVRRVRIFQFMVSMAALACAYKGLRWL-TRLRSKTPSKLL 295
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: G5A3S2_PHYSP (Peroxin-13 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A3S2_PHYSP) HSP 1 Score: 94.0 bits (232), Expect = 8.040e-18 Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 3
Query: 561 PMGEQYAWLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVG----NALAALQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAVPLL 917
P G WL S SS+G +TELLGMN +A+ F +G+ + FLE +G A L P FP GHPRHGEPP T EEE+ R+ RVR+ ++ V + ++ +R + +P++ LL
Sbjct: 173 PNGGGLGWLASFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPVFPPGHPRHGEPPVTEEEEKSRLRRVRIFQFMVSMAALGCVYKGLRWLARLRSPKAPAKLL 295
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A833WCQ5_PHYIN (Peroxin-13 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WCQ5_PHYIN) HSP 1 Score: 92.8 bits (229), Expect = 1.790e-17 Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 582 WLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVGNALAA----LQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAVPLL 917
WL+S SS+G +TELLGMN +A+ F +G+ + FLE +G A L P FP GHPRHGEPP T EEE+ R+ RVR++++ V + ++ +R I RL R+ LL
Sbjct: 172 WLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAVCAGIAAMLAPRPTFPPGHPRHGEPPVTEEEEKSRLRRVRIVQFMVSMAALTVVYKGLRWI-MRLRSRATQKLL 286
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A329SG37_9STRA (Peroxin-13 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329SG37_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 6.920e-17 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 3
Query: 582 WLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVGNALAA----LQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAVPLL 917
WL+S SS+G +TELLGMN +A+ F +G+ + FLE +G A L P FP GHPRHGEPP T EEE+ R+ RVR+ ++ V + ++ +R I RL R+ LL
Sbjct: 180 WLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAGMLAPRPVFPPGHPRHGEPPVTEEEEKSRLRRVRIFQFMVSMAALTVLYKGLRWI-MRLRSRTTQKLL 294
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A484EDV4_BRELC (Peroxin-13 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDV4_BRELC) HSP 1 Score: 90.9 bits (224), Expect = 9.300e-17 Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 3
Query: 516 NRYGMGAGLGVGSPGPMGEQYAWLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVGNALAA----LQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIHNRLNPRSAVPLL 917
+R GMG +G S WL ++ SS+G +TELLGMN +A+ F + + + F+E + A L P FP GHPRHGEPP + EEE+ R RVR+ ++ V +FL A ++ VR I RL+ R+ +L
Sbjct: 151 SRLGMGGMMGGASGDLNSGSLGWLSNINQMVSSIGQITELLGMNAEALNFCITSFIHFIERIRAMCAGIATMLAPRPVFPPGHPRHGEPPISEEEEKIRRRRVRIFQFMVSMFLLTALYKGVRWI-TRLSIRTRPKML 287
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Match: A0A1V9Z127_9STRA (Peroxin-13 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z127_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.460e-16 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 3
Query: 582 WLHSVQHFTSSLGYLTELLGMNTQAIGFFLGNAMGFLEHVG----NALAALQPWREFPMGHPRHGEPPPTAEEERKRVSRVRVLRWAVGLFLAYAAFRIVRGIH-----NRLNPRSAVPL 914
WL+S S++G +T+LLGMN +A+ F GN + F+E + +A+A L P FP GHPR+GEPP T EE + R+ RV+V+++ V L + Y A ++ + + R +P+ +PL
Sbjct: 155 WLNSFNQTVSAVGQITQLLGMNAEALNFCFGNFVHFMERMAFMCTSAVAMLSPKPVFPPGHPRYGEPPETEEEIKSRLRRVKVVKFVVSLLIIYVASKLGQKLRMLLWRTRKSPQKRLPL 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig538.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig538.3.1 >prot_P-wetherbeei_contig538.3.1 ID=prot_P-wetherbeei_contig538.3.1|Name=mRNA_P-wetherbeei_contig538.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=322bp MPPQPRAQVPSAKGWDVSIGETLAAPSTLSPSVASAVEASSTTATSIKFPback to top mRNA from alignment at P-wetherbeei_contig538:2843..4920- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig538.3.1 ID=mRNA_P-wetherbeei_contig538.3.1|Name=mRNA_P-wetherbeei_contig538.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2078bp|location=Sequence derived from alignment at P-wetherbeei_contig538:2843..4920- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig538:2843..4920- >mRNA_P-wetherbeei_contig538.3.1 ID=mRNA_P-wetherbeei_contig538.3.1|Name=mRNA_P-wetherbeei_contig538.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=966bp|location=Sequence derived from alignment at P-wetherbeei_contig538:2843..4920- (Phaeothamnion wetherbeei SAG_119_79)back to top |