mRNA_P-wetherbeei_contig5374.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI) HSP 1 Score: 191 bits (485), Expect = 1.240e-50 Identity = 140/335 (41.79%), Postives = 187/335 (55.82%), Query Frame = 1
Query: 16 VALAPSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRERRVCDECLP-TAGTTAPCAARCANIIVSPSETDPYRKQEAVRQLATLLASRAK-AAPAXXXXXXXXXXXXXXXGPPGLREMERC-GGCALLFRALAPFLSDDVPLDVCAHACELLGAALFMAS-QFSPAAWRRCAAAMPPPTLAGLLACLEVAPAREKAARVLXXXXXXXXXXXXXXXXXXSDGKDGNGRRDILKDLHAAGALPAILRALASLSSSRQGIFVWLCAAVRPLVAEQPKSALQLLRDGFVPALVAVLGSPFTDAAAHACAVLVAAIK 1008
+A +P L+ DD R C++C E F LRRRHHCRCCG++VCA CS K L+ ++ PGY+R RR C C A C +R A I +P D Y KQ AVR L+ + AK A + XXXXXXXXXXXX GP L ++R GG +F+AL P +S +VPLDVC HAC+LLGA+LF+AS Q SP W +P + GLL CL VAPAR KAAR L S G G +L+ L + P A+ + +G+ VWLCA ++P++A++P++ L +P L L + D A H C VL +A++
Sbjct: 147 IAFSPHLIPDDDRSQCSVCGERFAALRRRHHCRCCGELVCATCSPTKLLMHVSEPGYERPRRACQTCAAHIAAGEYSCNSRYALAIATPG-ADMYHKQAAVRHLSAAMEDAAKNAVKSGXXXXXXXXXXXXVLGP--LSAIQRVHGGTPAVFQALVPMMSTEVPLDVCTHACQLLGASLFVASRQSSPETWVGLVKVIPEGCVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRG----GVSIMLEVLESLPLAPPPTAAVET-----KGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLAAGPADIAVHVCGVLASALR 469
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.370e-41 Identity = 130/309 (42.07%), Postives = 169/309 (54.69%), Query Frame = 1
Query: 94 RRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRERRVCDECLP-TAGTTAPCAARCANIIVSPSETDPYRKQEAVRQLATLLASRAK-AAPAXXXXXXXXXXXXXXXGPPGLREMERC-GGCALLFRALAPFLSDDVPLDVCAHACELLGAALFMAS-QFSPAAWRRCAAAMPPPTLAGLLACLEVAPAREKAARVLXXXXXXXXXXXXXXXXXXSDGKDGNGRRDILKDLHAAGALPAILRALASLSSSRQGIFVWLCAAVRPLVAEQPKSALQLLRDGFVPALVAVLGSPFTDAAAHACAVLVAAIK 1008
R RHHCRCCG+VVCA CS K L+ ++ PGY+R RR C C A C AR A I +P D Y KQ AVR L+ + AK +XXXXXXXXXXXXX GP L ++R GG +F AL P +S +VPLDVC HAC+LLGA+LF+AS Q SP W +P + GLL CL VAPAR KAAR L S G G +L+ L + P A+ + +G+ VWLCA ++P++A++P++ L +P L L + D A H C VL +A++
Sbjct: 7 RWRHHCRCCGEVVCATCSPTKLLIHVSEPGYERPRRACQTCAAHIAAGEYSCNARYALAIATPG-ADTYHKQAAVRHLSAAMEDAAKKTVQSXXXXXXXXXXXXXVRGP--LSAIQRVHGGTPAVFEALVPMMSTEVPLDVCTHACQLLGASLFVASRQSSPKTWVDLVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRG----GVSIMLEVLESLPLAPPPTAAVET-----KGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALR 303
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: A0A4D9CRT6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRT6_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.580e-11 Identity = 97/338 (28.70%), Postives = 128/338 (37.87%), Query Frame = 1
Query: 28 PSLVDDDARKLCALCTEPFT-TLRRRHHCRCCGDVVCAACSGRKRLLPLA------APGYDRERRVCDECLPTAGTTAPCAARCANIIVSPSETDPYRKQEAVRQLATLLASRAKAAPAXXXXXXXXXXXXXXXGPPGLREMERCGGCALLFRALAPFL-SDDVPLDVCAHACELLGAALFMASQFSPAAWRRCAAAMP---PPTLAGLLACLEVAPAREKAARVLXXXXXXXXXXXXXXXXXXSDGKDGNGRRDILKDLHAAGALPAILRALASLSSSRQGIFVWLCAAVRPLVAEQPKSALQLLRDGFVPALVAVLGSPFTDAAAHACAVLVAAIK 1008
P V D R C LC F +R RHHCRCCG++VC CS K +LP PG + RVCD C T RC V+ A R +A L A ++E GG + +ALAP L + PL V A LG L + +Q PA AA + P L +L L+ +E AARV+ K L A P +L L +S +G+ W+ A+VRPLVA LL G + L ++L S D AHA + + A I+
Sbjct: 205 PFYVPDSMRSGCFLCQVKFQLVVRGRHHCRCCGEIVCDKCSQGKLVLPREHESFKKGPGGELGHRVCDHCHAHVATHG--NFRCMVRYVTTLRAGKEASTAAQRYVALRLLVEALDPSTHWKGDVNLGNDAAQKAA----DLETSGGAPAICQALAPLLDAATAPLAVQEMALIALGHVLTLTAQ-QPALKSSYAAHLANESPGILPRVLDALDEPALQEHAARVVYYAASEPVCQ---------------------KTLRHVSAWPRVLDLL---TSPTEGVQRWVAASVRPLVAGNRALLDYLLTSGALFVLGSLLCSDLPDVQAHALSAISAVIR 511
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: W7TC83_9STRA (Mitochondrial carrier family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC83_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 5.390e-11 Identity = 97/338 (28.70%), Postives = 127/338 (37.57%), Query Frame = 1
Query: 28 PSLVDDDARKLCALCTEPFT-TLRRRHHCRCCGDVVCAACSGRKRLLPLA------APGYDRERRVCDECLPTAGTTAPCAARCANIIVSPSETDPYRKQEAVRQLATLLASRAKAAPAXXXXXXXXXXXXXXXGPPGLREMERCGGCALLFRALAPFL-SDDVPLDVCAHACELLGAALFMASQFSPAAWRRCAAAMP---PPTLAGLLACLEVAPAREKAARVLXXXXXXXXXXXXXXXXXXSDGKDGNGRRDILKDLHAAGALPAILRALASLSSSRQGIFVWLCAAVRPLVAEQPKSALQLLRDGFVPALVAVLGSPFTDAAAHACAVLVAAIK 1008
P V D R C LC F +R RHHCRCCG++VC CS K LP G + RVCD C T RC V+ A R +A L A ++E GG + +ALAP L + PL V A LG L + +Q PA AA + P L +L L+ +E AARV+ K L A A P +L L +S +G+ W+ A+VRPLVA LL G + L ++L S D AHA + + A I+
Sbjct: 205 PFYVPDSMRSGCFLCQVKFQLVVRGRHHCRCCGEIVCDKCSQGKLALPREHESFKKGAGGELGHRVCDHCHAHVATHG--NFRCMVRYVTTLRAGKEASTAAQRYVALRLLVEALEPSTHWKGDVNLGNDAAQKAA----DLETSGGAPAICQALAPLLDAATAPLPVQEMALIALGHVLTLTAQ-QPALKSSYAAHLANESPGILPRVLDALDEPALQEHAARVIYYAASEPVCQ---------------------KTLRQASAWPRVLDLL---TSPAEGVQRWVAASVRPLVAGNRALLDYLLTSGALFVLGSLLCSDLPDVQAHALSAISAVIR 511
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: R1F828_EMIHU (FYVE-type domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F828_EMIHU) HSP 1 Score: 67.0 bits (162), Expect = 8.050e-11 Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 43 DDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRERRVCDECL 219
D ++ C LC++PFT LRRRHHCR CG VVC +CS +R +P G +RVCD C+
Sbjct: 4 DASQPSCRLCSKPFTLLRRRHHCRSCGQVVCDSCSTGRRPVP----GSPTPKRVCDNCV 58
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: R7TXN5_CAPTE (FYVE-type domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TXN5_CAPTE) HSP 1 Score: 68.2 bits (165), Expect = 1.290e-10 Identity = 32/66 (48.48%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 25 APSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYD--RERRVCDEC 216
AP+ + D +C C+ PF+T +RRHHCR CG VVC+ CS K L YD RE RVCD C
Sbjct: 11 APTWIKDGETSMCMQCSNPFSTFKRRHHCRACGKVVCSKCSTHKAKL-----AYDEYRENRVCDRC 71
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: A0A812C114_SEPPH (FGD4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C114_SEPPH) HSP 1 Score: 73.2 bits (178), Expect = 1.880e-10 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 25 APSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRER--RVCDECLPTAGTT 237
AP+ V DDA C LC FTT RRRHHCR CG+VVCA CS +K +PL+ YD + RVCD+C TT
Sbjct: 1060 APTWVKDDAATSCMLCNNQFTTFRRRHHCRGCGNVVCAKCSSKK--VPLS---YDDNKLNRVCDKCFELLDTT 1127
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: A0A0L8GSP6_OCTBM (Uncharacterized protein (Fragment) n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8GSP6_OCTBM) HSP 1 Score: 72.4 bits (176), Expect = 2.180e-10 Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 25 APSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRER--RVCDEC 216
AP + DDA +C LC+ FTT RRRHHCR CG VVC CS RK LPL YD + RVCD+C
Sbjct: 397 APRWIKDDAASMCMLCSNQFTTFRRRHHCRACGYVVCGKCSSRK--LPLL---YDDNKLNRVCDKC 457
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: A0A7S3UVM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM8_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 2.190e-10 Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 4 RPAAVALA-PSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRERRVCDECLPTAGTTAP-CAARCANII 270
R AA AL P+ V D+AR C L E FT L R+HHC+CCGDVV + K ++PL +++E++VC +C+ + P C RC ++
Sbjct: 91 RGAAAALVLPAEVPDEARDRCPLSGERFTLLNRKHHCKCCGDVVSRGVT-EKLIIPLPGDDFEKEKKVCTDCVEHCKASDPECLKRCLLVL 180
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Match: A0A6P7SCX6_OCTVU (FYVE, RhoGEF and PH domain-containing protein 2 isoform X1 n=5 Tax=Octopus TaxID=6643 RepID=A0A6P7SCX6_OCTVU) HSP 1 Score: 72.4 bits (176), Expect = 3.170e-10 Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 25 APSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGRKRLLPLAAPGYDRER--RVCDEC 216
AP + DDA +C LC+ FTT RRRHHCR CG VVC CS RK LPL YD + RVCD+C
Sbjct: 804 APRWIKDDAASMCMLCSNQFTTFRRRHHCRACGYVVCGKCSSRK--LPLL---YDDNKLNRVCDKC 864 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5374.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5374.3.1 >prot_P-wetherbeei_contig5374.3.1 ID=prot_P-wetherbeei_contig5374.3.1|Name=mRNA_P-wetherbeei_contig5374.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=337bp MRPAAVALAPSLVDDDARKLCALCTEPFTTLRRRHHCRCCGDVVCAACSGback to top mRNA from alignment at P-wetherbeei_contig5374:2347..3594+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5374.3.1 ID=mRNA_P-wetherbeei_contig5374.3.1|Name=mRNA_P-wetherbeei_contig5374.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig5374:2347..3594+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5374:2347..3594+ >mRNA_P-wetherbeei_contig5374.3.1 ID=mRNA_P-wetherbeei_contig5374.3.1|Name=mRNA_P-wetherbeei_contig5374.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig5374:2347..3594+ (Phaeothamnion wetherbeei SAG_119_79)back to top |