mRNA_P-wetherbeei_contig5373.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: D7G044_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G044_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.110e-63 Identity = 105/154 (68.18%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 64 VKAAPAQTPALPDLSGVELSGLQGKALLDKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
V+ AP PA D+ GV+LSGL G AL KT+PTK E + VIPKHCFV+DT RSM+YA S A+TL+ G L A F+PL +A LP W+AYA GT ATG WVVAHECGHGAFS N+ LQDAVGYVLHSALLVPYFSWQRSH VHHA TNHM +G
Sbjct: 65 VETAP---PATIDMEGVQLSGLNGLALQPKTFPTKREVMDVIPKHCFVKDTVRSMKYAVLSCAITLSMGGLAAAFLPLKLAMLPAWIAYAVSCGTAATGAWVVAHECGHGAFSSNRQLQDAVGYVLHSALLVPYFSWQRSHAVHHAHTNHMEKG 215
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7S0RB03_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RB03_9CHLO) HSP 1 Score: 207 bits (526), Expect = 4.460e-62 Identity = 102/154 (66.23%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 64 VKAAPAQTPALPDLSGVELSGLQGKALLDKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
V AA P D+S V LSGL+G+AL +WPTKSE L+ IP CF RDT +S+ YAA S A+TL CGAL IP+T+A P W+AY V GT+ATGCWVVAHECGH AFSDNK +QDAVGYVLHS LLVPYFSWQRSH VHHA+TNH+TEG
Sbjct: 57 VAAAADPEPPSVDMSSVALSGLEGQALKINSWPTKSEVLNSIPPECFKRDTAKSLMYAAISTALTLGCGALAYFTIPMTMAYWPAWLAYGFVNGTIATGCWVVAHECGHMAFSDNKFIQDAVGYVLHSLLLVPYFSWQRSHAVHHAKTNHLTEG 210
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A835YKJ6_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKJ6_9STRA) HSP 1 Score: 199 bits (505), Expect = 8.180e-59 Identity = 104/175 (59.43%), Postives = 122/175 (69.71%), Query Frame = 1
Query: 7 AASRSLVTTTRMVMXXXXPVKAAPAQTPALP--DLSGVELSGLQGKALLDKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
A+ R+ T R V+ V + P L L V+LSGL G+AL+DK +PTK+E LS IP CF DT RS++ A SL +T AC A GA IP+T AALP WVAYAAVTGTVA G WV+AHECGHGAFS N+ LQD VG+ LHSALLVPY+SWQRSH VHHA TNH+T G
Sbjct: 39 ASQRNGAVTKRQVLAEPVVVDKTASSRPVLDLDALRNVQLSGLNGQALVDKEFPTKNEVLSAIPAECFELDTKRSLQCTAWSLVLTAACAAAGAALIPVTPAALPAWVAYAAVTGTVAMGNWVIAHECGHGAFSSNRALQDFVGFTLHSALLVPYYSWQRSHAVHHAHTNHVTHG 213
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7S4B2Y1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2Y1_CHRCT) HSP 1 Score: 197 bits (500), Expect = 3.860e-58 Identity = 100/154 (64.94%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 70 AAPAQTPALPDLSGVELSGLQGKALL--DKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
A PA P P V SGL+GKALL PTK++ +P+HCF RDT RSM+YA +S+ +T AC A G FIP+ +AALPLW+AYAA TGT ATGCWVVAHECGHGAFSDNK +Q AVGY+LHSALLVPYFSWQRSH VHHA TNH+++G
Sbjct: 58 ADPATKPVPPV---VAFSGLEGKALLVTPDDIPTKAQIREALPEHCFKRDTARSMKYAVQSVLVTAACAATGL-FIPMKLAALPLWIAYAAATGTAATGCWVVAHECGHGAFSDNKRIQTAVGYLLHSALLVPYFSWQRSHAVHHANTNHISQG 207
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7S0TTZ8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0TTZ8_HEMAN) HSP 1 Score: 195 bits (496), Expect = 3.160e-57 Identity = 98/142 (69.01%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 100 DLSGVELSGLQGKALLDKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
D S V LSGL G AL +PTK E + IP+HCF RDT +S+ YAA S AMTLAC A G IP+ A P+W YA VTGTVATGCWVVAHECGHGAFSDNKT+QD VGYVLH+ALLVPYFSWQRSH VHH++TNH+TEG
Sbjct: 97 DSSDVMLSGLNGLALSGIEYPTKKEVYAAIPEHCFKRDTIKSLMYAAISTAMTLACFAAGTQ-IPMKWAFAPVWALYAYVTGTVATGCWVVAHECGHGAFSDNKTIQDLVGYVLHTALLVPYFSWQRSHAVHHSKTNHLTEG 237
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: C1MKR5_MICPC (Plastidial delta 12 fatty acid desaturase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MKR5_MICPC) HSP 1 Score: 194 bits (493), Expect = 5.210e-57 Identity = 95/150 (63.33%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 85 TPALPDLSGVELSGLQGKALL---DKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
T A + SGL GKAL+ K +PT++E LS IP+ CF +DTG+SM YAA S MT CG LG +IPL++ P+W+AYAAVTGT+ATGCWVVAHECGH AFSDN+ +QD VGY LHS LLVPYFSWQRSH VHH+RTNH+TEG
Sbjct: 57 TAAAVSFDDIPRSGLNGKALMFPPKKDFPTRAEVLSSIPEDCFKKDTGKSMFYAAISTLMTFGCGVLGYLYIPLSLNFWPVWLAYAAVTGTIATGCWVVAHECGHNAFSDNRFIQDLVGYTLHSLLLVPYFSWQRSHAVHHSRTNHLTEG 206
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7S0DAW2_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DAW2_MICPS) HSP 1 Score: 193 bits (490), Expect = 6.830e-57 Identity = 92/137 (67.15%), Postives = 109/137 (79.56%), Query Frame = 1
Query: 121 SGLQGKALL--DKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
SG++GKAL K +P+ +E LS IPKHCFV+DT RSM YA S A+T+ CG L ++PL +A LP W+AYA V GT +TGCWVVAHECGHGAFSDNKT+QD VGY+LHS LLVPYFSWQRSH VHH+RTNH+ EG
Sbjct: 39 SGMEGKALNADQKQFPSMAEVLSKIPKHCFVKDTFRSMMYAIVSTALTVGCGVLAYLYLPLQMAYLPAWIAYAFVAGTCSTGCWVVAHECGHGAFSDNKTVQDTVGYILHSLLLVPYFSWQRSHAVHHSRTNHVLEG 175
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7S3BVP6_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BVP6_9VIRI) HSP 1 Score: 191 bits (486), Expect = 1.980e-56 Identity = 100/151 (66.23%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 91 ALPDLSGVELSGLQGKALLDKT-----WPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGA-GFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
A P + EL GL GKAL + +P KSE ++ IP CF RDT RSM +A S A+TLAC A+GA G IPL + P W+ Y VTGTVATGCWV AHECGHGAFSDN+TLQDAVGYVLHSALLVPYFSWQRSH VHHARTNH+TEG
Sbjct: 17 AAPRGAHFELGGLGGKALANAALPLDAYPKKSEVMAAIPAECFERDTLRSMMFALTSAALTLACFAVGASGAIPLAWSWAPAWLLYGFVTGTVATGCWVAAHECGHGAFSDNRTLQDAVGYVLHSALLVPYFSWQRSHAVHHARTNHLTEG 167
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7S4IDB5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IDB5_9EUKA) HSP 1 Score: 186 bits (471), Expect = 1.820e-55 Identity = 100/158 (63.29%), Postives = 118/158 (74.68%), Query Frame = 1
Query: 64 VKAAPAQTPALP-DLSGVELSGLQGKAL---LDKTWPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALGAGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
V A P TPAL D SGL+GKAL +D+ P K + V+P HCF R+T +SM YA +S+A+T C ALG IP+ A+LPLW+AYAAVTGT ATG WVVAHECGHGAFSDN+ LQDAVGY+LH+ALLVPYFSWQ SH VHH+RTNH+TEG
Sbjct: 12 VAAEPQATPALAVDGLTTMQSGLKGKALGVTMDQI-PNKKQIRDVVPAHCFKRNTLKSMFYAVQSVAVTGLCVALGR-MIPMRAASLPLWLAYAAVTGTAATGMWVVAHECGHGAFSDNRALQDAVGYILHTALLVPYFSWQHSHAVHHSRTNHITEG 167
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Match: A0A7R9XUR9_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XUR9_9VIRI) HSP 1 Score: 188 bits (478), Expect = 4.190e-55 Identity = 94/157 (59.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query: 64 VKAAPAQTPALPDLSGVELSGLQGKALLDKT--WPTKSEALSVIPKHCFVRDTGRSMRYAARSLAMTLACGALG-AGFIPLTVAALPLWVAYAAVTGTVATGCWVVAHECGHGAFSDNKTLQDAVGYVLHSALLVPYFSWQRSHGVHHARTNHMTEG 525
V A P LP + V +SG+ G+A+ +P++ E + IPK CF +DT RSM YAA S AMTLACGA+G +G IP+T AA PLW+ Y AVTGTVATGCWV+AHECGH AFS+N+ LQD VGY+LH+ALLVPYFSWQRSH +HH++TNH +G
Sbjct: 27 VAALPTVEEVLPGVP-VLMSGMNGQAIRAAATEFPSRKEVIDSIPKECFEKDTLRSMAYAATSTAMTLACGAVGLSGLIPMTWAAAPLWLLYGAVTGTVATGCWVIAHECGHNAFSNNRKLQDTVGYILHTALLVPYFSWQRSHAIHHSKTNHTVDG 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5373.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5373.1.1 >prot_P-wetherbeei_contig5373.1.1 ID=prot_P-wetherbeei_contig5373.1.1|Name=mRNA_P-wetherbeei_contig5373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp RAAASRSLVTTTRMVMTPPPPVKAAPAQTPALPDLSGVELSGLQGKALLDback to top mRNA from alignment at P-wetherbeei_contig5373:1..858- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5373.1.1 ID=mRNA_P-wetherbeei_contig5373.1.1|Name=mRNA_P-wetherbeei_contig5373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig5373:1..858- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5373:1..858- >mRNA_P-wetherbeei_contig5373.1.1 ID=mRNA_P-wetherbeei_contig5373.1.1|Name=mRNA_P-wetherbeei_contig5373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig5373:1..858- (Phaeothamnion wetherbeei SAG_119_79)back to top |