mRNA_P-wetherbeei_contig5369.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5369.1.1
Unique NamemRNA_P-wetherbeei_contig5369.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.320e-85
Identity = 207/578 (35.81%), Postives = 293/578 (50.69%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGWE------AGVV----------------------------LSASADFANAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAKGGRNDAKXXXXXXXXXGLAARLIRKTAELRSLCIYWNGAEVGNPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSXXXXXXXXXXXXXXXXXXXXSSEGAXXXXXXXXXXXXXXVGEGITPAPPPGPWCGHWRSGDADDPATGDLALRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTINAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLADPAAWWRYAIQATLHTVRGHADGFSCER----LTRRRALRLEYSTLWQKNMG 1683
            MFER VS++L+RLL EYV+ ++F+ E++++G+W G +VL+D+ +K  L+DML+LPL LRHG +GRL+++IPWS L +DPI+V +DRVFL VEP++ WD  A   R +A+KR  IAAAE+FR + L D     T  +GGS  R    G QKW+T+RL    I +IVDSL+I +R VH RYEDR S+PS PFY+G + ES+ + S  + GWE      +G +                            + A+   A++++                       XXXXXX   G R+   X        G   RL++KT +L  L +YWN AE GNPC M +SD+  ++A++V+ RL++R+  DA                                                     G G  P  P                      LRHR +L PVD  A + LS DP+D + P+    V +  +  +LE FQ +  MCL A+ AR+    KY + RP  P L DPAAWWR+A    +  +R  ADGFS       + +RR +RLEY  LW+K +G
Sbjct:    1 MFERLVSSILTRLLGEYVEDSTFNTESVKLGIWRGYLVLEDMHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRVFLVVEPKFEWDAGAVKRRERAVKRGKIAAAELFRTSPLDDTPAGST--EGGSKARWG-SGLQKWVTDRL----ITRIVDSLQIHVREVHVRYEDRTSNPSTPFYLGATLESVWLES-TDQGWEVQPGPRSGPIRRGGTGXXXXXXXXXXXXXXXXXXXENGIEATTGVASSSSSPRGDGVGGDDPAMSSGARAVGNXXXXXX-XPGARSXXXXGGSRGVVVG--DRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISRLIARKDDDA--------------------------------------------------GEAGAGNGPGEP----------------------LRHRYLLEPVDANARVALSVDPSDRSQPRVQAQVELGTISCQLEHFQLQGAMCLGASVARYGEVGKYFKHRPEVPVLEDPAAWWRFAFAVVVDKLR--ADGFSHSSRFPDMAKRRRMRLEYMPLWKKALG 493          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A6H5JPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL9_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 2.350e-63
Identity = 167/516 (32.36%), Postives = 236/516 (45.74%), Query Frame = 1
Query:  187 LRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGWE------AGVVLSASADFANAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAKGGRNDAKXXXXXXXXXGLAA-------------------------------RLIRKTAELRSLCIYWNGAEVGNPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSXXXXXXXXXXXXXXXXXXXXSSEGAXXXXXXXXXXXXXXVGEGITPAPPPGPWCGHWRSGDADDPATGDLA---LRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTINAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLADPAAWWRYAIQATLHTVRGHADGFS 1614
            + +K  L+DML+LPL LRHG +GRL+++IPWS L +DPI+V +DR+FL VEP++ WD  A  +R +A+KR  IAAAE+FR + L D     +  +GGS  R    G QKW+T+RL    + +IVDSL+I +R VH RYEDR+S+PS PFY+G + ESL + S  + GWE      +G +          +A                              +   R D           G  A                               RL++KT +L  L +YWN AE GNPC M +SD+  ++A++V+ RL++R+             DD                                                              DAD+   G+ A   LRHR ++ PVD  A + LS DP+D + P+    V +  +  +LE FQ +  MCL A+ AR+    KY + RP  P L DPAAWWR+A    +  +R  ADGFS
Sbjct:    1 MHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRIFLVVEPKFEWDAGAVKQRERAVKRGKIAAAELFRTSPLDDTPAGSS--EGGSKARWG-SGLQKWVTDRL----VTRIVDSLQIHVREVHLRYEDRISNPSTPFYLGATVESLWLES-TDQGWEVQPGPRSGPIRPGGTGGEGESAVPPRNGGRRKAASENEIEATTGVAAS----SSSPRGDGVGGDDPAISSGARAVGNXXXXXXXXXXXXXXXXXXXGSRSVVVGDRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISRLIARK-------------DD--------------------------------------------------------------DADEAGAGNGAGEPLRHRYLIEPVDASARVALSVDPSDRSQPRVQAQVELGTISCQLEHFQLQGAMCLGASVARYGEVGKYFKHRPEVPVLEDPAAWWRFAFAVVVDKLR--ADGFS 427          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A482SWM9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWM9_9ARCH)

HSP 1 Score: 160 bits (405), Expect = 2.520e-40
Identity = 84/201 (41.79%), Postives = 130/201 (64.68%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHI 666
            MFE+ +S +L +LL ++V+      E +++GVWSG +VL++L LK ++ ++L++P+ L +G +GRLEL IPWS LG +P+ V LD++++ VEP+Y W   A   R QA+K+A +AAAE+F    L + +     G GG  G      A+ W    L    ++KIVD  ++ IR +H RYED++S P+  F VG+SFESLH+
Sbjct:    1 MFEQGLSFILKKLLRDFVEDGDNLHEKVQVGVWSGLIVLENLVLKNSIFNLLEVPVALSYGYIGRLELHIPWSRLGYEPVTVVLDKIYILVEPKYEWHSGAQERREQAMKQAKLAAAELFANQRLQENS-----GSGGYAGL-----AKNWFMGAL----LSKIVDKFQVTIRELHIRYEDKMSCPT-EFCVGISFESLHV 186          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A2R5G2R3_9STRA (Vacuolar protein sorting-associated protein 13A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2R3_9STRA)

HSP 1 Score: 154 bits (389), Expect = 8.110e-35
Identity = 141/553 (25.50%), Postives = 230/553 (41.59%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDG--RKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGWEAGVVLSASADFANAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAKGGRNDAKXXXXXXXXXGLAARLIRKTAELRSLCIYW--------NGAEVGNPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSXXXXXXXXXXXXXXXXXXXXSSEGAXXXXXXXXXXXXXXV---GEGITPAPPPGPWCGHWRSGDADDPATGDLALRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTINAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLAD-PAAWWRYAIQATLHTVRGHADGFSCERLTRRRALRLEYSTLWQKNM 1680
            MFE +V+ +L+R+L  YV+   F  + +   ++ G++VL +L ++    D + +P+ LR G +G+++++IPW+HLG  P+ + +DRVFL +EP   ++E     + +A K+A++A AE+ + + + + A    G    +D   R     A++      T RL+NKIVD++E+ +R VH RYEDRV++P   F VG ++ESL + S     W        +  F +  +                                  R D            L   L  K   L    IYW        NGA++    C      T  E   + +R++ +R           + +                       S  G+                   E I  A                  A      +H  +L PV +   +  ++DP     P   V + I  V + LE FQY D   + AAF   +  + Y Q+RP    + D P  WW++AI+ATL  V+     FS E +T RR  RL Y  LW++++
Sbjct:    1 MFEGWVANLLNRVLGAYVEDGCFRPDKVSTSIYGGHMVLSELEVRKDAFDTVGVPIKLRRGFIGQVDVKIPWTHLGSQPVEISIDRVFLILEPSLEYNERDYQRKVKARKKADLARAELRKSSGMTNPA----GDADDTDAISRAHMSEAEEMAKVGFTARLMNKIVDNIELNVRNVHVRYEDRVTNPKHAFSVGATWESLKMQSTDRH-W--------TPCFVDLVSEIKR------------------------------RLDESGKY-------LEKLLAYKLFRLDHFAIYWDPFPGTSTNGADLDYSTC------TFAEMAAIFERMIPKRQQQEEEDYRLVERETRRARAQASPAGSGAAGGLAGAGSKHGSAEELTDGRGSASDRPLEDSERIRSAAXX--XXXXXXXXHQKTRARLGTGAQHCFVLEPVSLTLKMQSNRDPRFPESPDTVVDLDIATVTLVLERFQYLDAWEMLAAFDAAEKSYPYAQFRPQGVTVRDAPRIWWQFAIRATLENVQERRRRFSPEYITDRRQDRLLYIELWKRSL 495          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A836CEC6_9STRA (Vacuolar protein sorting-associated protein 13A N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEC6_9STRA)

HSP 1 Score: 129 bits (323), Expect = 9.390e-32
Identity = 58/99 (58.59%), Postives = 80/99 (80.81%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDE 360
            MFER ++++L+ +L EYV+ +SFSQETIR+GVWSGN+VL+++ LK ++LD  QLPL LRHG +GRLEL+IP + LG DPIV  L+ V++ V P+Y WDE
Sbjct:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE 99          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A7S1CBN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBN4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.250e-31
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 1
Query:   70 ERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGW 690
            E++V+ +L++LLS+YV    FS + + + VWSG VVL DL LKP  LD LQLPL +  G VGRLE +IPW + G     V +D VF+  E +Y W  E       A KR  + AAE +      +   R + G GGS        A +        RL  KIV++L++ IR +H R EDR S+P  PF  G++ E L +  + N+ W
Sbjct:    1 EKWVAPLLTKLLSDYVKEECFSPDKVEVAVWSGYVVLNDLELKPTALDFLQLPLRVVRGYVGRLEFQIPWGNPGSKQSTVKVDEVFIVAETKYDWTPEELRAWRDADKRRRLEAAEAY------EEKRRDSAGAGGSK-------ASEAEAAGFVGRLATKIVENLQVTIRGLHVRVEDRRSNPERPFAFGVTLEGL-VARSTNARW 193          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A0P1BCL7_9BASI (Vacuolar protein sorting-associated protein n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0P1BCL7_9BASI)

HSP 1 Score: 129 bits (323), Expect = 8.870e-27
Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVW---DEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
            M E  +++VL+R L+ YVDG + SQ  + +G+WSG+V L++LRLK + LD  +LP+ ++ G +G L L IPWS+L   P+ V ++ V+L   P+      D+E   ERAQA K   +A AE+   +    ++E                 AQK   E  T  L+ KIVD+L+I +R +H RYED++S+P  PF  GL+
Sbjct:    1 MLEGVLASVLNRFLASYVDGLNTSQ--LNVGIWSGDVKLRNLRLKTSALDKFRLPIDVKEGFLGDLTLSIPWSNLKGKPVRVLVENVYLLAAPKEASVEIDDEEEEERAQAAKLEKLANAELLGTSSSIGVSE---------------ADAQK--NESFTSSLVTKIVDNLQITVRNIHVRYEDKLSNPEHPFSAGLT 179          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A061H3P9_9BASI (Uncharacterized protein n=1 Tax=Pseudozyma flocculosa PF-1 TaxID=1277687 RepID=A0A061H3P9_9BASI)

HSP 1 Score: 127 bits (320), Expect = 1.310e-26
Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPR---YVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
            M E  +++VL+R L+ YVDG + SQ  + +G+WSG+V L++LRLK + LD  +LP+ ++ G +G L L IPWS+L   P+ V ++ V+L   P+      DE    ERAQA K+  +A AE      L     ++T G    D +K          E  T  LI KIVD+L+I +R +H RYEDR+S+P  PF  G++
Sbjct:    1 MLEGVLASVLNRFLAAYVDGLNTSQ--LNVGIWSGDVKLKNLRLKTSALDKFRLPIDVKEGYLGDLTLSIPWSNLKGKPVRVLVENVYLLAAPKNSSVEVDEAEEEERAQAAKQEKLANAE------LLGRDSQQTIGMSQEDAQK---------NESFTSSLITKIVDNLQITVRNIHIRYEDRLSNPEHPFSAGIT 181          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: UPI000D1C8717 (putative vacuolar protein sorting-associated protein 13F n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C8717)

HSP 1 Score: 116 bits (290), Expect = 3.780e-26
Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQA----LKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
            MFE  V  +L R L +YV G   S E ++I VW G+VVL+DL+LK   L+ L+LPLT++ G +G + L+IPW+ LG+DP++V LDRVF+  EP  V DE+             KR+ I   EM  ++  A        G+ G D       ++ W+       L+  I+ +L++ +  +H RYED +S+PS PF  G++
Sbjct:    1 MFEAHVLYLLRRYLGQYVRG--LSAEALQISVWKGDVVLKDLQLKAEALNALRLPLTVKAGFLGSVTLKIPWNKLGKDPVIVLLDRVFVLAEP--VEDEQLFKNENMESWLDAKRSQIEELEMALLDAKA--------GRSGDDASPE---SKSWLGS-----LVATIIGNLKVSVTNLHIRYEDTLSNPSHPFCFGVT 179          
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A316Z2F6_9BASI (Uncharacterized protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z2F6_9BASI)

HSP 1 Score: 126 bits (317), Expect = 4.730e-26
Identity = 75/198 (37.88%), Postives = 114/198 (57.58%), Query Frame = 1
Query:   64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVW---DEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
            M E  ++ VL+R L+ YVDG + SQ  + +G+WSG+V L++LRLK + LD  +LP+ ++ G +G L L IPWS+L   P+ V ++ V+L   P+      DE+   ERA+A K+  +A AE+        ++E                 AQK   E  T  L+ KIVD+L+I +R +H RYED++S+P  PF  GL+
Sbjct:    1 MLEGVLATVLNRFLASYVDGLNTSQ--LNVGIWSGDVKLRNLRLKTSALDKFRLPIDVKEGYLGDLTLSIPWSNLKGKPVRVLVENVYLLAAPKEASAEVDEDEERERAEAAKQEKLANAELLGGGSKVGVSEE---------------DAQK--NESFTSSLVAKIVDNLQITVRNIHVRYEDKLSNPEHPFSAGLT 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP20_ECTSI1.320e-8535.81Vacuolar protein sorting-associated protein, putat... [more]
A0A6H5JPL9_9PHAE2.350e-6332.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SWM9_9ARCH2.520e-4041.79Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2R5G2R3_9STRA8.110e-3525.50Vacuolar protein sorting-associated protein 13A n=... [more]
A0A836CEC6_9STRA9.390e-3258.59Vacuolar protein sorting-associated protein 13A N-... [more]
A0A7S1CBN4_9STRA1.250e-3139.13Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0P1BCL7_9BASI8.870e-2738.38Vacuolar protein sorting-associated protein n=2 Ta... [more]
A0A061H3P9_9BASI1.310e-2639.39Uncharacterized protein n=1 Tax=Pseudozyma floccul... [more]
UPI000D1C87173.780e-2637.19putative vacuolar protein sorting-associated prote... [more]
A0A316Z2F6_9BASI4.730e-2637.88Uncharacterized protein n=1 Tax=Tilletiopsis washi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5369contigP-wetherbeei_contig5369:701..3414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LP20
PFAMsChorein_N,SHR-BD,VPS13,VPS13_C,VPS13_mid_rpt
Model size2167
Max annot lvl2759|Eukaryota
KEGG koko:K19525
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0006810,GO:0006914,GO:0006996,GO:0007033,GO:0007034,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016043,GO:0016192,GO:0016236,GO:0022607,GO:0030587,GO:0031154,GO:0032502,GO:0044085,GO:0044237,GO:0044248,GO:0045324,GO:0046907,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0061919,GO:0070925,GO:0071840,GO:0090702,GO:0099120,GO:1905037
Exons3
Evalue1.73e-86
EggNOG OGsCOG5043@1|root,KOG1809@2759|Eukaryota
Descriptionregulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
Cds size2103
COG categoryU
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186802.9574268-CDS-P-wetherbeei_contig5369:700..23141683186802.9574268-CDS-P-wetherbeei_contig5369:700..2314Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5369 701..2314 -
1683186802.969714-CDS-P-wetherbeei_contig5369:2719..31051683186802.969714-CDS-P-wetherbeei_contig5369:2719..3105Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5369 2720..3105 -
1683186802.979419-CDS-P-wetherbeei_contig5369:3248..33511683186802.979419-CDS-P-wetherbeei_contig5369:3248..3351Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5369 3249..3351 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186802.9895213-UTR-P-wetherbeei_contig5369:3351..34141683186802.9895213-UTR-P-wetherbeei_contig5369:3351..3414Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5369 3352..3414 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5369.1.1prot_P-wetherbeei_contig5369.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5369 701..3351 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5369.1.1

>prot_P-wetherbeei_contig5369.1.1 ID=prot_P-wetherbeei_contig5369.1.1|Name=mRNA_P-wetherbeei_contig5369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=701bp
MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLD
MLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEE
AAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQK
WMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLH
IGSARNSGWEAGVVLSASADFANAAAAAAGNCGGGGRAGGAGRGNAGGTS
GNSGSWAKGGRNDAKGGGSGGGDGGLAARLIRKTAELRSLCIYWNGAEVG
NPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSGGENGGD
LGGGDNCGCLGGTSSEGASTGGISGGLADGSVVGEGITPAPPPGPWCGHW
RSGDADDPATGDLALRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTI
NAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLADPAAWWRY
AIQATLHTVRGHADGFSCERLTRRRALRLEYSTLWQKNMGWDWAAQSGGG
GGGGGGVSCVAAADSGGYDSWALSPANGHSSPDYSSGLSAAASPSATDAE
KALSLVQEEAALDAAVAATPVPTDGPGGGGGSGRSGGGSRRRRRQRGIKR
LMGCGKEQRRRLAELEAELSFEDIMLFRAMAEREALRQMRESGLVGAAAG
G
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mRNA from alignment at P-wetherbeei_contig5369:701..3414-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5369.1.1 ID=mRNA_P-wetherbeei_contig5369.1.1|Name=mRNA_P-wetherbeei_contig5369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2714bp|location=Sequence derived from alignment at P-wetherbeei_contig5369:701..3414- (Phaeothamnion wetherbeei SAG_119_79)
GGAGCGAACGGGGGAGGCGCAGGGAGCAGAGGAGGAACGCTTCTTACGCG TCGTCGATGAGCGATGTTTGAGCGGTTCGTGTCGGCGGTGCTGTCCCGTC TTCTGAGCGAATACGTTGACGGAGCGAGCTTCAGCCAGGAAACGATACGG ATTGGCGTCTGGAGCGGTAAGTCAGCGCCGACGCTCCACCACATCGCTCG CAACTTCTTTCTTTCTGCCAATTTTGCTTTGCGTGGATTAGCAGCGCACC GGAAAACGGGCGAAAACGTCAAGAAGTTGCGGTCTGATCTCTTTCTACTT TCCCTCCAGGCAATGTGGTGCTGCAAGACCTCCGCCTCAAGCCTGCCCTG CTGGACATGCTGCAGCTGCCGCTCACATTGCGGCATGGCAGCGTCGGGCG GCTGGAGCTGCGCATCCCTTGGAGCCACCTTGGTCGGGATCCAATCGTCG TCTTCTTGGACCGCGTCTTTCTCTGCGTGGAGCCCCGCTACGTCTGGGAC GAGGAGGCGGCGGCGGAGCGGGCTCAGGCCCTGAAGCGTGCCAACATTGC GGCGGCGGAAATGTTTCGCGTCAACTATCTGGCAGACCTGGCCGAGAGAC GGACAGGCGGGCAGGGGGGCAGTGACGGGAGGAAGCGGCGCGGCGGAGCT CAGAAGTGGATGACGGAGCGCCTGACGGAGCGGCTGATCAACAAGGTGAA GCGGCAAAAAAATTGAACGGATGGCATTCATTGAGGAGTTGTTGTAGTTC CAAACTGGGCCAACCATCTTTTCCTGATATTGGAACACTCCACCAAACTC CATCTTATTGCGGACGCCTTCGGCTTGCTTAGAAGACGTAAAACTTCCTG TTCTGGGGCAGTGCCGGGATTGCTGCATGTGTTAACATTTGGGAGAGGGC GAGTGGTCTGTCCTATCTTAAGTGACTAATTGTGCCCGGTAAAGCGCTGC TATCTCGCTGGTGTGTAGCGAAAAGTGCTTCTCAGCCACGTATGGTTTTT GTTCCTGCAAACCCGTTTTACTGACCGGTCATCTTCGGCATGTTCCAACC ATTTCAGCGGCGTCTCTCCCGCTGCCGCCTCTCTTGCGTACTCTTTTCAG ATCGTCGACAGCCTCGAGATCCGCATCAGAGCCGTCCACTTCCGCTACGA GGACCGCGTGAGCAGCCCGTCCTGCCCCTTCTACGTTGGACTTTCTTTCG AGTCCCTCCATATCGGATCCGCCCGGAACAGCGGCTGGGAAGCGGGCGTC GTCCTGAGCGCCTCCGCCGACTTTGCAAACGCCGCCGCTGCCGCTGCTGG CAACTGTGGCGGCGGAGGCCGCGCTGGCGGTGCCGGTAGAGGCAATGCTG GTGGTACGAGCGGCAACAGCGGTAGTTGGGCAAAGGGTGGCCGGAACGAT GCGAAGGGCGGCGGCAGTGGGGGCGGCGACGGCGGACTGGCGGCGCGGCT GATCAGGAAAACGGCGGAGCTGCGAAGCCTATGCATATACTGGAACGGCG CAGAGGTTGGCAACCCGTGCTGCATGCACGTCTCCGACCTGACACCCGAG GAGGCTGATATCGTTATGGACCGCCTCGTCTCGCGGAGATTACCGGACGC CATCGCCTCCTGCAGCGGTGACGATAGCGACGATAACAGCGGCGGCGAAA ACGGCGGTGACCTCGGCGGCGGTGACAACTGCGGCTGCCTCGGCGGCACA AGTAGTGAAGGAGCGAGCACTGGGGGCATCAGCGGCGGCCTGGCCGATGG CAGCGTCGTTGGAGAAGGTATAACGCCGGCGCCGCCACCAGGACCGTGGT GCGGACACTGGCGCAGCGGCGATGCCGATGACCCGGCCACAGGCGACTTG GCACTGCGGCACCGCTGCATTCTGCGGCCGGTGGATGTTGTGGCGCACAT CACCCTCAGCAAGGACCCTGCGGACGGGGCGCTCCCAAAAGCGGCAGTAG CGGTCACCATCAATGCCGTTGACGTCCGCCTCGAGGCGTTCCAGTACCGG GACGTGATGTGCCTCGCCGCGGCGTTCGCGCGCTTCGATGCGCAGCACAA GTACGTGCAGTGGCGGCCGGTGGCACCTCCGCTGGCGGACCCGGCGGCGT GGTGGCGGTACGCGATCCAGGCAACGCTTCACACCGTCCGGGGCCATGCG GACGGCTTTTCGTGCGAGCGGCTGACGCGGCGGCGGGCGCTGCGCCTGGA GTACAGCACGCTCTGGCAGAAGAACATGGGTTGGGATTGGGCGGCACAGT CCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTGTCTTGTGTCGCTGCAGCC GACAGCGGCGGCTATGACAGCTGGGCGCTCTCACCAGCCAACGGGCACAG CTCCCCGGACTACTCCTCTGGACTGTCGGCCGCGGCATCGCCGTCGGCCA CCGACGCCGAAAAGGCGCTGTCGTTGGTGCAGGAAGAGGCGGCACTCGAT GCCGCCGTGGCCGCCACGCCAGTCCCAACGGACGGGCCCGGCGGTGGTGG CGGCAGCGGGCGCAGTGGCGGCGGCAGCAGGCGGCGGCGGCGTCAACGGG GCATCAAGCGTCTGATGGGGTGTGGCAAGGAGCAGCGGCGGCGGCTGGCC GAACTCGAGGCAGAATTGAGCTTCGAGGACATTATGCTCTTCCGCGCCAT GGCGGAGCGGGAGGCGTTGCGCCAGATGCGCGAGTCCGGGCTCGTCGGCG CGGCGGCTGGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5369:701..3414-

>mRNA_P-wetherbeei_contig5369.1.1 ID=mRNA_P-wetherbeei_contig5369.1.1|Name=mRNA_P-wetherbeei_contig5369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2103bp|location=Sequence derived from alignment at P-wetherbeei_contig5369:701..3414- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGAGCGGTTCGTGTCGGCGGTGCTGTCCCGTCTTCTGAGCGAATA
CGTTGACGGAGCGAGCTTCAGCCAGGAAACGATACGGATTGGCGTCTGGA
GCGGCAATGTGGTGCTGCAAGACCTCCGCCTCAAGCCTGCCCTGCTGGAC
ATGCTGCAGCTGCCGCTCACATTGCGGCATGGCAGCGTCGGGCGGCTGGA
GCTGCGCATCCCTTGGAGCCACCTTGGTCGGGATCCAATCGTCGTCTTCT
TGGACCGCGTCTTTCTCTGCGTGGAGCCCCGCTACGTCTGGGACGAGGAG
GCGGCGGCGGAGCGGGCTCAGGCCCTGAAGCGTGCCAACATTGCGGCGGC
GGAAATGTTTCGCGTCAACTATCTGGCAGACCTGGCCGAGAGACGGACAG
GCGGGCAGGGGGGCAGTGACGGGAGGAAGCGGCGCGGCGGAGCTCAGAAG
TGGATGACGGAGCGCCTGACGGAGCGGCTGATCAACAAGATCGTCGACAG
CCTCGAGATCCGCATCAGAGCCGTCCACTTCCGCTACGAGGACCGCGTGA
GCAGCCCGTCCTGCCCCTTCTACGTTGGACTTTCTTTCGAGTCCCTCCAT
ATCGGATCCGCCCGGAACAGCGGCTGGGAAGCGGGCGTCGTCCTGAGCGC
CTCCGCCGACTTTGCAAACGCCGCCGCTGCCGCTGCTGGCAACTGTGGCG
GCGGAGGCCGCGCTGGCGGTGCCGGTAGAGGCAATGCTGGTGGTACGAGC
GGCAACAGCGGTAGTTGGGCAAAGGGTGGCCGGAACGATGCGAAGGGCGG
CGGCAGTGGGGGCGGCGACGGCGGACTGGCGGCGCGGCTGATCAGGAAAA
CGGCGGAGCTGCGAAGCCTATGCATATACTGGAACGGCGCAGAGGTTGGC
AACCCGTGCTGCATGCACGTCTCCGACCTGACACCCGAGGAGGCTGATAT
CGTTATGGACCGCCTCGTCTCGCGGAGATTACCGGACGCCATCGCCTCCT
GCAGCGGTGACGATAGCGACGATAACAGCGGCGGCGAAAACGGCGGTGAC
CTCGGCGGCGGTGACAACTGCGGCTGCCTCGGCGGCACAAGTAGTGAAGG
AGCGAGCACTGGGGGCATCAGCGGCGGCCTGGCCGATGGCAGCGTCGTTG
GAGAAGGTATAACGCCGGCGCCGCCACCAGGACCGTGGTGCGGACACTGG
CGCAGCGGCGATGCCGATGACCCGGCCACAGGCGACTTGGCACTGCGGCA
CCGCTGCATTCTGCGGCCGGTGGATGTTGTGGCGCACATCACCCTCAGCA
AGGACCCTGCGGACGGGGCGCTCCCAAAAGCGGCAGTAGCGGTCACCATC
AATGCCGTTGACGTCCGCCTCGAGGCGTTCCAGTACCGGGACGTGATGTG
CCTCGCCGCGGCGTTCGCGCGCTTCGATGCGCAGCACAAGTACGTGCAGT
GGCGGCCGGTGGCACCTCCGCTGGCGGACCCGGCGGCGTGGTGGCGGTAC
GCGATCCAGGCAACGCTTCACACCGTCCGGGGCCATGCGGACGGCTTTTC
GTGCGAGCGGCTGACGCGGCGGCGGGCGCTGCGCCTGGAGTACAGCACGC
TCTGGCAGAAGAACATGGGTTGGGATTGGGCGGCACAGTCCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGTGTCTTGTGTCGCTGCAGCCGACAGCGGCGG
CTATGACAGCTGGGCGCTCTCACCAGCCAACGGGCACAGCTCCCCGGACT
ACTCCTCTGGACTGTCGGCCGCGGCATCGCCGTCGGCCACCGACGCCGAA
AAGGCGCTGTCGTTGGTGCAGGAAGAGGCGGCACTCGATGCCGCCGTGGC
CGCCACGCCAGTCCCAACGGACGGGCCCGGCGGTGGTGGCGGCAGCGGGC
GCAGTGGCGGCGGCAGCAGGCGGCGGCGGCGTCAACGGGGCATCAAGCGT
CTGATGGGGTGTGGCAAGGAGCAGCGGCGGCGGCTGGCCGAACTCGAGGC
AGAATTGAGCTTCGAGGACATTATGCTCTTCCGCGCCATGGCGGAGCGGG
AGGCGTTGCGCCAGATGCGCGAGTCCGGGCTCGTCGGCGCGGCGGCTGGC
GGC
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