mRNA_P-wetherbeei_contig5367.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5367.1.2
Unique NamemRNA_P-wetherbeei_contig5367.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A4D9D6X1_9STRA (Mcl1_mid domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6X1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.160e-58
Identity = 121/308 (39.29%), Postives = 170/308 (55.19%), Query Frame = 3
Query:    3 QDAFMPASTPIGARRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNGRTSRFQDTWGFMVGALSPAGAVFAS-------PGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAATP------AGDDQSLENLVLDVMGRRELVKSR--MCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            Q  F+P+S+P+ A +R+L WN  G+I S + G HNV+EI  +D    R  RF D + F +G+++  GA+FAS       P + DK     D +             RS ++++      +A  QW   LP  E  L VAVGA W A AT R+ VR+FT SG Q  V A+PGPVV M G+G  ++V YH   P          QSL   +LD+  RR +V S+  +CLSP S+L+W G     M   MDS G++ +LV    W W P++++   R+NK D  WPVG+  G L C +L+GG+EHP T P+
Sbjct:  414 QGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASR-RPIRFTDHYRFNMGSMAEEGAIFASATLEEIIPDKGDKQVENKDEE-------------RSTVFFRPFANY-SAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDI--RRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSPLRRNKMDSFWPVGVFNGSLMCSLLRGGDEHPPTNPK 704          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 9.630e-51
Identity = 92/168 (54.76%), Postives = 114/168 (67.86%), Query Frame = 3
Query:  378 ELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAATPAGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            E V+ VAVG GW AAATNR+LVR+F+ASG Q E   LPGPVV M G G  + V +H   P GD Q+L   +LDV G+REL K  +CLSP S L W G  E+GM +AMDSAG+V AL  S GWQW P++DT +  K+K    WPVG+++G+L    LK GEEHP+  PR
Sbjct:  447 ESVVSVAVGRGWVAAATNRQLVRLFSASGLQGETIMLPGPVVSMVGSGDVLMVAFHKGEPIGDGQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPR 614          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A836CJ04_9STRA (Mcl1_mid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ04_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.770e-48
Identity = 114/330 (34.55%), Postives = 153/330 (46.36%), Query Frame = 3
Query:    3 QDAFMPASTPIGARRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNGRTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAATPAGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTK-------------------------------------EGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            Q AF P +T    +RRYLCWN  G++ ++++           D       RFQD++ F + +L   GA FA+   V  D+A    DG            RSVL++  LG+  A +  W KMLPA E+   VA G  W A ATN+ ++RVFTASG Q EV  LPGPVVCMA  GP + V YHAA PA   Q+L    +++     + +  + LSPKS L W G   + M  AMDS G +  L   +GW    ++ T                                      E   +     WPV +    LT V LKG E+ P+T PR
Sbjct:  545 QPAFQPGATQTD-KRRYLCWNGVGTVVTVED----------KDLNRNNVERFQDSYRFTLASLGRCGAAFATAPAVSSDDA----DGDDGEGASRDDAARSVLFFTPLGK-WAGSPSWRKMLPAGEVAACVAAGDDWVAFATNKHMLRVFTASGMQREVVRLPGPVVCMAAGGPLLGVVYHAAAPAMGSQTLAFWQVNLKTGARVAEGPLGLSPKSELTWLGFSRERMLCAMDSRGALVGLTPVVGWAPTVLLQTNXXXXXXXXXXXXXXXXXXXXXKCAQASGAADDGFIAPETAASTHSRMWPVSVAGAHLTAVALKGSEKFPATFPR 858          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: L1IHN9_GUITC (Mcl1_mid domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IHN9_GUITC)

HSP 1 Score: 167 bits (424), Expect = 2.980e-43
Identity = 102/291 (35.05%), Postives = 151/291 (51.89%), Query Frame = 3
Query:    3 QDAFMPASTPIGARRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNGRTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHA-ATPA-GDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMS-LGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHP 866
            Q +F P STP+  +RR+L +   G ITS +E T+N +EI  +D    R  RF D  GF + A+  +GAVFASP      E   D++              S L Y+    S A+ + WT  +P  E ++ VA    W AAAT++R++R+F+ S  Q      PGP +CM G   F+   YH  ++P+   DQ L+ L++++  +  + +  +CLSP S L W  V E GM   MDS G+V     +    QW+PM+D K   K++ D  WP+ I    L  VV K  + +P
Sbjct:  379 QASFQPQSTPVELKRRFLTYTTVGHITSRNESTYNAIEIEFADINTHRPIRFNDFTGFTMAAMDASGAVFASP---QVRERNGDLN-------------LSTLSYRPFD-SWASQSDWTTTMPENEEIMAVATSESWVAAATSKRILRIFSTSCVQLMTVMFPGPALCMHGCNDFLCFIYHTPSSPSLSGDQELQFLLMNISTKTTVARGPVCLSPGSKLEWLQVTETGMVAIMDSEGMVMVYSHAEFSGQWIPMLDIKTCNKHQRDWFWPIRITDSNLLGVVCKIEKRYP 652          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A2I0VJ01_9ASPA (Protein Mut11 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VJ01_9ASPA)

HSP 1 Score: 163 bits (412), Expect = 1.400e-41
Identity = 103/296 (34.80%), Postives = 151/296 (51.01%), Query Frame = 3
Query:    3 QDAFMPASTPIGA-RRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNG-RTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAATP-AGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            Q+AF P STP+   +RR+LC+N  GSIT+I+   ++ +E+   D   G R     D +GF + AL+  G++FA+P +  K                      S L Y+  G S A  ++W+    A E V  VA+G GW AA T+   +R+FT  G Q  V  L GPVV  AG    ++V  HA+   +  DQ LE  V ++ GR +L++ R+ LSP S L W G  E+G     DS GV+  L    G  WLP+    + +K++ +  W VG+ A +L CV  K    +P   P+
Sbjct:  420 QEAFQPGSTPVQVGKRRFLCYNLLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYFGFTMAALNENGSIFANPCKGTKS--------------------MSTLMYRPFG-SWANNSEWSMRFEA-EEVKAVALGTGWVAAVTSLNFLRIFTDGGLQRHVLCLDGPVVTAAGFRNKLAVVTHASDCFSSGDQVLEVQVFNINGRTQLIRCRLPLSPGSCLSWFGFSEEGQLCTYDSQGVLRMLTNQYGNSWLPIFSASKAKKSEDENYWMVGLNANKLFCVSCKSPNSYPLVMPK 693          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: UPI0018AE738D (WD repeat and HMG-box DNA-binding protein 1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE738D)

HSP 1 Score: 161 bits (408), Expect = 4.850e-41
Identity = 98/297 (33.00%), Postives = 158/297 (53.20%), Query Frame = 3
Query:    3 QDAFMPASTPIG-ARRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNG-RTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAAT--PAGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            Q+AF P STPI   +RR+LC+N  GSIT+++   ++ +E+   D   G R     D +GF + +L+  G+VFA+P + +K+                     S L Y+    S A  ++W+    A E V  VA+G GW AAAT+   +R+FT  G Q  +  L GPVV +AG    +++  HA+   P+GD Q L+ +VL+++   + + SR+ L+P S L W G  ++G   + DS GV+       G  WLP+    + RK++ +  W VG+ A +L C++ K  + +P   P+
Sbjct:  425 QEAFQPGSTPIQPGKRRFLCYNLLGSITTLENEGNSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNT--------------------STLMYRPFS-SWANNSEWSMRFEA-EEVQAVALGNGWVAAATSLNFLRIFTDGGLQKHILCLNGPVVTLAGLKDELAIVTHASDSLPSGD-QVLDVMVLNILNGTQTIISRLPLTPSSHLTWFGFSDEGQLSSYDSKGVLRMFSTQFGGSWLPVFSASKARKSEDENYWVVGLSASKLFCIICKSPDSYPLVMPK 698          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A835UNH3_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UNH3_VANPL)

HSP 1 Score: 153 bits (387), Expect = 3.060e-38
Identity = 101/297 (34.01%), Postives = 151/297 (50.84%), Query Frame = 3
Query:    3 QDAFMPASTPIGA-RRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNG-RTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAAT--PAGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            Q+AF P STP+ A +RR+LC+N  GSIT+++   +  +EI   D   G R     D +GF + AL+  G+VFA+P + +K+                     S L Y+  G S A  ++W+    A E V  VA+G GW AA TN   +R+FT  G Q ++ +L GPVV  AG    ++V  HA+   P+G+ Q L+  V ++  R + +  R+ +SP S L W G  E+G     DS GV+  L    G  WLP+    +  K+  +  W VG+   +L CV  K    +P   P+
Sbjct:  424 QEAFQPGSTPVQAGKRRFLCYNLLGSITTMENEGYCHIEIDFHDTGRGPRVPSMTDYFGFTMAALNENGSVFANPCKGEKN--------------------MSTLMYRPFG-SWANNSEWSMRFEA-EEVKAVALGTGWVAAVTNLDFLRIFTEGGLQRDILSLDGPVVTAAGYRETLAVVSHASDCLPSGE-QVLQVKVFNISDRTQPIGCRVPVSPGSYLTWFGFSEEGQLCTYDSKGVLRLLTSQYGGCWLPIFSANKATKSGDENYWVVGLSGNKLFCVECKPPISYPLVMPK 697          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A6H5KWI2_9PHAE (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI2_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.660e-38
Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  486 LPGPVVCMAGEGPFISVTYHAATPAGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            LPGPVV M G G  + V +H   P GD Q+L   +LDV G+REL K  +CLSP S L W G  E+GM +AMDSAG+V AL  S GWQW P++DT +  K+K    WPVG+++G+L    LK GEEHP+  PR
Sbjct:    2 LPGPVVSMVGSGDVLMVAFHKGEPIGDGQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPR 133          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A6P8HFG5_ACTTE (WD repeat and HMG-box DNA-binding protein 1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HFG5_ACTTE)

HSP 1 Score: 151 bits (381), Expect = 2.010e-37
Identity = 96/297 (32.32%), Postives = 151/297 (50.84%), Query Frame = 3
Query:    3 QDAFMPASTPIGARRRYLCWNNHGSITS-IDEGTHNVVEILPSDRQNGRTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAATPAGDDQSLENLVLDVMGRRELVKS-RMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGI--LAGRLTCVVLKGGEEHPSTQPR 881
            Q  F PASTP     R++ WN+ G +    +E   + +E+   D          +     + ALS +  + A        +++DDM              +S L   + G S  ++ +W   LP+ E + ++AVG  WAA ATN+  +R+FT +G Q  + ++PGPVV M+G    + V YHA  P  ++QSL   + D+  ++++V   R+ LS K+ L W G  ++G  V +DS G+V  L  S G  W P++DTK   KNK+D  W VG+   A ++ C++ KG    P T PR
Sbjct:  422 QQPFQPASTPSHLMHRFMVWNSVGIVRCHTEEDDLSTIEVEFHDASTHHPLHLTNHLNHTMAALSSSAVLLAC-------KSQDDM--------------KSKLVCLHFG-SWDSSKEWVVDLPSKEEIEVIAVGQNWAAVATNKFHIRIFTLTGVQLSLISVPGPVVSMSGHNSQLIVAYHAGNPLPNEQSLGFKLFDLSTQQQIVADQRIPLSRKATLSWIGFSDEGTPVVVDSVGIVRFLNRSFGCTWTPVLDTKSQLKNKSDNYWVVGLEERARQIRCILCKGSS-FPPTLPR 695          
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Match: A0A0S3RGP9_PHAAN (Mcl1_mid domain-containing protein n=6 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RGP9_PHAAN)

HSP 1 Score: 150 bits (380), Expect = 2.580e-37
Identity = 98/296 (33.11%), Postives = 150/296 (50.68%), Query Frame = 3
Query:    3 QDAFMPASTPIG-ARRRYLCWNNHGSITSIDEGTHNVVEILPSDR-QNGRTSRFQDTWGFMVGALSPAGAVFASPGEVDKDEARDDMDGXXXXXXXXXXXRRSVLYYKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASGFQSEVFALPGPVVCMAGEGPFISVTYHAATP-AGDDQSLENLVLDVMGRRELVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMIDTKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR 881
            Q+AF P STP    +RR+LC+N  G ITSI+   ++ +EI   D     R     D +GF + ALS +G+VFA+P + +K+                     S L Y+    S A  ++W+      E V +VA+GA W AA T+   +R+F+ SG Q  VF L GPV+   G    ++V  H     + +DQ LE +V ++    +L++ R+ +SP S L W G  E+G   + DS GV+ +     G +W+P+    + + N+    W  G+ A +L CVV K  EE P   P+
Sbjct:  422 QEAFQPGSTPFQPGKRRFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTPRVPSMTDHFGFTMAALSESGSVFANPCKGEKN--------------------MSTLMYRPFS-SWANNSEWSMRFEG-EEVKVVALGAAWVAAVTSLNYLRIFSESGLQKHVFTLDGPVLTATGFKEKLAVVTHVFDCLSSNDQMLEFIVFNIPQGIQLLQGRLPISPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSQFGGRWVPLFSASKEKSNENY--WVTGLNASKLFCVVCKKPEEFPQVMPK 693          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5367.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D6X1_9STRA4.160e-5839.29Mcl1_mid domain-containing protein n=3 Tax=Monodop... [more]
D7G152_ECTSI9.630e-5154.76Mcl1_mid domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CJ04_9STRA1.770e-4834.55Mcl1_mid domain-containing protein n=1 Tax=Tribone... [more]
L1IHN9_GUITC2.980e-4335.05Mcl1_mid domain-containing protein n=1 Tax=Guillar... [more]
A0A2I0VJ01_9ASPA1.400e-4134.80Protein Mut11 n=1 Tax=Dendrobium catenatum TaxID=9... [more]
UPI0018AE738D4.850e-4133.00WD repeat and HMG-box DNA-binding protein 1 n=1 Ta... [more]
A0A835UNH3_VANPL3.060e-3834.01Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A6H5KWI2_9PHAE5.660e-3852.27Mcl1_mid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6P8HFG5_ACTTE2.010e-3732.32WD repeat and HMG-box DNA-binding protein 1-like n... [more]
A0A0S3RGP9_PHAAN2.580e-3733.11Mcl1_mid domain-containing protein n=6 Tax=Phaseol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5367contigP-wetherbeei_contig5367:163..2823 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G152
Preferred nameWDHD1
PFAMsANAPC4_WD40,HMG_box,Mcl1_mid,WD40
Model size881
Max annot lvl2759|Eukaryota
KEGG koko:K11274
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0000727,GO:0000775,GO:0000785,GO:0000790,GO:0000819,GO:0000981,GO:0001302,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006310,GO:0006325,GO:0006342,GO:0006355,GO:0006357,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007275,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0019219,GO:0019222,GO:0019899,GO:0022402,GO:0022616,GO:0030702,GO:0031298,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033260,GO:0033301,GO:0033554,GO:0033567,GO:0034085,GO:0034641,GO:0034645,GO:0035185,GO:0040029,GO:0042023,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045448,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061641,GO:0065007,GO:0070013,GO:0070063,GO:0070827,GO:0070828,GO:0070829,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0098687,GO:0098813,GO:0140014,GO:0140110,GO:1901360,GO:1901363,GO:1901576,GO:1902679,GO:1902969,GO:1903047,GO:1903461,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons6
Evalue1.39e-51
EggNOG OGsKOG1274@1|root,KOG1274@2759|Eukaryota
Descriptionheterochromatin maintenance
Cds size867
COG categoryS
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5367.1.2prot_P-wetherbeei_contig5367.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5367 177..2823 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186802.7539573-UTR-P-wetherbeei_contig5367:162..1761683186802.7539573-UTR-P-wetherbeei_contig5367:162..176Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5367 163..176 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186802.7653928-CDS-P-wetherbeei_contig5367:176..2781683186802.7653928-CDS-P-wetherbeei_contig5367:176..278Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5367 177..278 +
1683186802.778198-CDS-P-wetherbeei_contig5367:510..6471683186802.778198-CDS-P-wetherbeei_contig5367:510..647Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5367 511..647 +
1683186802.7960026-CDS-P-wetherbeei_contig5367:1092..13091683186802.7960026-CDS-P-wetherbeei_contig5367:1092..1309Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5367 1093..1309 +
1683186802.8066962-CDS-P-wetherbeei_contig5367:1693..18301683186802.8066962-CDS-P-wetherbeei_contig5367:1693..1830Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5367 1694..1830 +
1683186802.8149521-CDS-P-wetherbeei_contig5367:2131..22941683186802.8149521-CDS-P-wetherbeei_contig5367:2131..2294Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5367 2132..2294 +
1683186802.8228607-CDS-P-wetherbeei_contig5367:2712..28231683186802.8228607-CDS-P-wetherbeei_contig5367:2712..2823Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5367 2713..2823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5367.1.2

>prot_P-wetherbeei_contig5367.1.2 ID=prot_P-wetherbeei_contig5367.1.2|Name=mRNA_P-wetherbeei_contig5367.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
MPASTPIGARRRYLCWNNHGSITSIDEGTHNVVEILPSDRQNGRTSRFQD
TWGFMVGALSPAGAVFASPGEVDKDEARDDMDGGGGGGGGGGSGRRSVLY
YKNLGRSGAAAAQWTKMLPACELVLLVAVGAGWAAAATNRRLVRVFTASG
FQSEVFALPGPVVCMAGEGPFISVTYHAATPAGDDQSLENLVLDVMGRRE
LVKSRMCLSPKSILLWTGVQEDGMAVAMDSAGVVWALVMSLGWQWLPMID
TKEGRKNKTDLCWPVGILAGRLTCVVLKGGEEHPSTQPR
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mRNA from alignment at P-wetherbeei_contig5367:163..2823+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5367.1.2 ID=mRNA_P-wetherbeei_contig5367.1.2|Name=mRNA_P-wetherbeei_contig5367.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2661bp|location=Sequence derived from alignment at P-wetherbeei_contig5367:163..2823+ (Phaeothamnion wetherbeei SAG_119_79)
TGCAGGACGCGTTCATGCCGGCGTCGACGCCGATCGGGGCGCGGCGCCGC TACCTGTGTTGGAACAACCACGGGAGCATCACCAGCATCGACGAGGGCAC CCACAACGTCGTCGAGGTGCGCCTCTAATCTCGCTATTGTCTTTTAAAGA ATCTAGAGGCTTCTTCCTGAATTTCTCTTGGTCACTGGAGCGCTGAGTGC AGCCATGCGCGCGCATTTTATTCTGAAACTTCTAAGGGCTGTAAGTTTAT CGGAGAGCGCTCGAAATCGCTGCTCCCCTCGTTCTCGCTCTCTTTGACGT CTTCTCTGTTGTGCTTTCTCATTCGTTCTTCTGATTGCCTGTTGGCAGAT CCTGCCATCTGACCGGCAGAACGGGCGCACCTCGCGCTTCCAGGATACGT GGGGCTTCATGGTCGGAGCGCTCTCGCCGGCGGGCGCCGTCTTCGCCAGC CCCGGCGAGGTTGATAAGGACGAAGCTCGCGACGAGTGAGTTTTCTTTGG TCTCCTGCCGCCGCTGCCGCCGCTGCCGCCGCCGTCACCACCGCTGCCAT CGTCACCGCCATCGTCGCCGCTGCCGCCGCCACGACAGCAGCCGCAGCCG CCACTGCAGCCGCAGCGCCACGGCAGCCGCTACCGCCGCCGCAAACGTAG CCACCGCTGCTACCGCGCCGCCGCGCTGTCGTTGCCGCCACAGCTGCTGG TTACCATACTAGCTGCCTACGGATCGCCTTCTTTTGCATGTGCAATCGCC ACAGCTCTTCTGCCACAATATTCATCTTAAACTTGCGGTTTTTGTTGTTT GCAGTTAGGTCTTCGTCGGCGAATGATCATTCCGCTTGACTCTTTCTATA ATGTTTTTACAACTGCATTATTTCCTCATCATCCATCTCCCGGCACCCGC CACACCGCATTTTTTACCTTTGCCGCACAGCATGGATGGCGGCGGAGGGG GCGGCGGCGGCGGTGGCAGCGGGCGGCGCAGCGTGCTGTATTATAAAAAC CTCGGGCGCAGCGGCGCTGCCGCCGCCCAGTGGACCAAGATGCTTCCGGC GTGCGAGCTCGTGCTGCTGGTGGCCGTCGGCGCCGGCTGGGCGGCGGCGG CGACGAACCGCCGCTTGGTCCGCGTATTCACCGCTTCAGGCTTCCAGGTG TGTACGCAAGGGGCGGATTGGCTTTGGGCTGCTCGCTAATTCGTAAAACA GGGCGTTGTCGAAGGCTGATTTGCGAGGTCGTGGATGACCTGGAGTTTCC TTTTCTCGCTGAATTGTTTTTAATTTATGTGTGAGGGCAGCAAACTAAAC GCGGCCTGACACCGCTTTGATTCAGATGCGTTGTCTTCAGGACGTGGAAA ACACGAACGAGCTTTGCTGTACGTGGGAACACATCTGCCTGATCTGTTCT TTCTCAAAGCCACTTGATGCGTTCCTTTCCCTCCCGCGCATTGCTGCCAT CGGCTTCTCAATCTCGTACCCGATCCCTCCGCACCCGCCGCTTTTTTCCT CGACCGCCGTGGCAATGGCGACGGCGATCAGTCCGAGGTATTTGCGCTGC CGGGGCCGGTGGTTTGCATGGCGGGCGAGGGCCCGTTCATATCCGTGACA TACCACGCCGCGACGCCCGCCGGCGACGATCAGAGCCTCGAAAACCTCGT TCTCGACGTCATGGGCCGGTGAGGGAAGAGGCGGCGGGAAATATATTCTT GATTTTTGACAGGTATCAGCGCGGGAAACCAGGCAAGCTGGCTCTGGGCC TGCCAGGAGGCGGCGCAGTGCCAGTGGCGCGGGCGTCGGCATAAACCTTT AGGGTGAAACGGGGAAGGACTGTGAATCCCGCCTTCTCCTGTGTCCCCTT TATTTTCTGACCTTTCCGTCTCTTGCCCTTCTTCTTTCTCATGTTGTTCG TTGCGTTGTGCTGTGCTGGCGGCTTGCAAACCGACGGCCTCTGTCTCTAC TACTCTACTGCTGCGGCAGGCGGGAGCTGGTCAAGTCACGGATGTGCCTG TCGCCGAAATCGATCCTGCTGTGGACGGGAGTGCAGGAGGACGGGATGGC AGTGGCAATGGACTCGGCGGGCGTTGTCTGGGCGCTCGTCATGTCGCTCG GCTGGCAGTGGCTCCCAATGATCGACACCAAGGTAAGGCGAACGGCAACG ATTGGCGGCTTCAGCGGCAGCGGCGGCGGAATGGCGGTGGTGGCGGTGGC GGGGGCTGCGGAAACCTTGGCGACGATTGTGGCGGCGCTAGTTGTCGCGG CTGTGGCCGCGGTACTTTATCGCGGTCGTGGGATGACTGTAGTACCTGTC CCGGCAGGCAGCAGAGGCGGCCCGCTACGTTACTTACGGCGGCAGTTGTA CAAGCGAAAGCTTCCCCCCGCGGCTTTGGTGGTCGTCACAGCCGGCAGGC AGCAGAGGCGGCCCGCTACGTTACTTACAACGACAATTGTACAAGCGAGG GCTTCCCCCCGCGGTTTTGGTGGTCGCCACAGCAGGGCAGGACGCTAGTG TCTGCCCGCCACTTACCGTTTCCTTCGCTTTCCTCGCGTTCTTTCTCCAG GAGGGGCGCAAGAACAAGACTGACCTGTGCTGGCCAGTCGGCATCCTGGC GGGGCGGCTCACTTGCGTCGTGCTCAAGGGCGGCGAGGAGCACCCATCCA CGCAGCCCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5367:163..2823+

>mRNA_P-wetherbeei_contig5367.1.2 ID=mRNA_P-wetherbeei_contig5367.1.2|Name=mRNA_P-wetherbeei_contig5367.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig5367:163..2823+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGCGTCGACGCCGATCGGGGCGCGGCGCCGCTACCTGTGTTGGAA
CAACCACGGGAGCATCACCAGCATCGACGAGGGCACCCACAACGTCGTCG
AGATCCTGCCATCTGACCGGCAGAACGGGCGCACCTCGCGCTTCCAGGAT
ACGTGGGGCTTCATGGTCGGAGCGCTCTCGCCGGCGGGCGCCGTCTTCGC
CAGCCCCGGCGAGGTTGATAAGGACGAAGCTCGCGACGACATGGATGGCG
GCGGAGGGGGCGGCGGCGGCGGTGGCAGCGGGCGGCGCAGCGTGCTGTAT
TATAAAAACCTCGGGCGCAGCGGCGCTGCCGCCGCCCAGTGGACCAAGAT
GCTTCCGGCGTGCGAGCTCGTGCTGCTGGTGGCCGTCGGCGCCGGCTGGG
CGGCGGCGGCGACGAACCGCCGCTTGGTCCGCGTATTCACCGCTTCAGGC
TTCCAGTCCGAGGTATTTGCGCTGCCGGGGCCGGTGGTTTGCATGGCGGG
CGAGGGCCCGTTCATATCCGTGACATACCACGCCGCGACGCCCGCCGGCG
ACGATCAGAGCCTCGAAAACCTCGTTCTCGACGTCATGGGCCGGCGGGAG
CTGGTCAAGTCACGGATGTGCCTGTCGCCGAAATCGATCCTGCTGTGGAC
GGGAGTGCAGGAGGACGGGATGGCAGTGGCAATGGACTCGGCGGGCGTTG
TCTGGGCGCTCGTCATGTCGCTCGGCTGGCAGTGGCTCCCAATGATCGAC
ACCAAGGAGGGGCGCAAGAACAAGACTGACCTGTGCTGGCCAGTCGGCAT
CCTGGCGGGGCGGCTCACTTGCGTCGTGCTCAAGGGCGGCGAGGAGCACC
CATCCACGCAGCCCCGG
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