mRNA_P-wetherbeei_contig53569.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53569.1.1
Unique NamemRNA_P-wetherbeei_contig53569.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: UPI00199D7332 (DUF4139 domain-containing protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI00199D7332)

HSP 1 Score: 327 bits (839), Expect = 1.900e-108
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 1
Query:    1 YGQAGQWYGGGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            YGQAGQWYGGG MTDR YGI GNKKVDTYLSFRNR E+GMGVPLPSGRVRVAKLD ADGSLEFIGEDRIDHTPKNETVQLKLGSAFD+VGERRQVDFK+D+NRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQ Y+KQD+RTIH PVTVAADGEAVVRYTVRY
Sbjct:  330 YGQAGQWYGGGPMTDRTYGITGNKKVDTYLSFRNRKEDGMGVPLPSGRVRVAKLDNADGSLEFIGEDRIDHTPKNETVQLKLGSAFDVVGERRQVDFKVDSNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQPYEKQDSRTIHVPVTVAADGEAVVRYTVRY 502          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A1F4DJ14_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DJ14_9PROT)

HSP 1 Score: 243 bits (620), Expect = 1.340e-77
Identity = 117/173 (67.63%), Postives = 134/173 (77.46%), Query Frame = 1
Query:    1 YGQAGQWYGGGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            YG  G  YGGG  TDRNYG   NKKVD YL F+N  E  MGVPLPSGR+RV+KLD AD +LEFIGED IDHTPKNE V +KLGSAFD+VGERRQV+F +DT+R  + EEIEVK+RN+K EPV VIVKENLYRW NW+I      + KQDART+HFPV +AA GE  V YTV+Y
Sbjct:  156 YGSVGYGYGGGPATDRNYGTQSNKKVDVYLGFKNAQENNMGVPLPSGRIRVSKLDDADKTLEFIGEDTIDHTPKNEKVLIKLGSAFDVVGERRQVNFSVDTSRKRIDEEIEVKLRNQKTEPVTVIVKENLYRWVNWQIIARTHDFQKQDARTVHFPVRIAAGGEVTVHYTVQY 328          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A1G1IH30_9BACT (Uncharacterized protein n=1 Tax=Nitrospirae bacterium RIFCSPLOWO2_02_FULL_62_14 TaxID=1801717 RepID=A0A1G1IH30_9BACT)

HSP 1 Score: 235 bits (600), Expect = 1.450e-76
Identity = 112/175 (64.00%), Postives = 139/175 (79.43%), Query Frame = 1
Query:    1 YGQAGQWYG--GGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            YG A Q++G     MTDRNYG+  NKKVD YLSF+N     MG+PLP+GR+RV+KLD+ADG+LEFIGED +DHTP+NE V +K+GSAFD+VGER+Q D+K+DT   T+TE IEV +RN K EPV V+VKENLYRW NWKIT     Y+KQD+RT+HFPV +A DG+A VRYTV+Y
Sbjct:   10 YGLAPQYWGHFAAPMTDRNYGLESNKKVDVYLSFKNDEAHHMGMPLPAGRIRVSKLDSADGTLEFIGEDTLDHTPRNEKVLIKMGSAFDVVGERKQTDYKLDTLNKTLTETIEVTLRNHKTEPVTVLVKENLYRWLNWKITARTHDYEKQDSRTVHFPVHLAKDGQATVRYTVQY 184          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A7C2UFZ6_9PROT (DUF4139 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UFZ6_9PROT)

HSP 1 Score: 236 bits (603), Expect = 6.450e-73
Identity = 112/161 (69.57%), Postives = 130/161 (80.75%), Query Frame = 1
Query:   37 MTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            +TDRNYG   ++KVD YL FRN  E  MG+PLPSGRVRV KLD+AD +LEFIGEDRIDHTP+NE V +K+GSAFD+VGERRQV+F +DT R  MTEEIEVK+RN K EPV VIVKENLYRW NW+I      Y KQDART+HFP+ VAADGE  +RYTV+Y
Sbjct:  347 VTDRNYGTQSSRKVDVYLGFRNAKEHNMGMPLPSGRVRVNKLDSADSTLEFIGEDRIDHTPRNEKVLIKMGSAFDVVGERRQVNFSVDTTRKIMTEEIEVKLRNHKKEPVNVIVKENLYRWVNWQIIAKTHDYKKQDARTVHFPLKVAADGETTLRYTVQY 507          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A7V9LLH5_9BURK (DUF4139 domain-containing protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7V9LLH5_9BURK)

HSP 1 Score: 227 bits (579), Expect = 2.150e-70
Identity = 111/160 (69.38%), Postives = 128/160 (80.00%), Query Frame = 1
Query:   40 TDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            TDR+YG+  N+KVD YL F+N     MG+PLP+GRVRV+KLD AD +LEFIGED IDHTP+NE + LKLGSAFD+VGERRQVDFK+DT R TMTEEIEVK+RN+K E V VI+KENLYRW NW I Q +  Y K+DARTI FPVTVAA  E  VRYTV Y
Sbjct:  251 TDRHYGVQSNRKVDVYLQFKNVEATNMGMPLPAGRVRVSKLDPADQTLEFIGEDVIDHTPRNENLLLKLGSAFDVVGERRQVDFKVDTTRKTMTEEIEVKLRNQKKEKVDVIIKENLYRWVNWNIAQRSHEYRKEDARTIVFPVTVAAGAELTVRYTVHY 410          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A838JJF2_9BURK (DUF4139 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A838JJF2_9BURK)

HSP 1 Score: 221 bits (564), Expect = 2.840e-70
Identity = 105/164 (64.02%), Postives = 130/164 (79.27%), Query Frame = 1
Query:   28 GGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            GG +TDR +G+ GN KVD YL F+N     MG+PLP+GR+RVAKLDTAD SLEFIGED I HT K+E+V +KLG+AFD+VGER+Q+DF++DTN   M E+IE+K+RNRKDE V V+V+ENLYRW+NW I +    + KQDARTI FPV +A  GEA VRYTVRY
Sbjct:   79 GGPITDRGHGVQGNSKVDIYLDFKNSESNRMGMPLPAGRIRVAKLDTADNSLEFIGEDMIGHTAKDESVLIKLGAAFDVVGERKQMDFRVDTNAKWMEEDIEIKLRNRKDEAVTVLVRENLYRWSNWSIIRKAPDFVKQDARTIQFPVRIAKGGEAAVRYTVRY 242          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: UPI0019C5E74B (DUF4139 domain-containing protein n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=UPI0019C5E74B)

HSP 1 Score: 229 bits (585), Expect = 3.280e-70
Identity = 109/160 (68.12%), Postives = 133/160 (83.12%), Query Frame = 1
Query:   40 TDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            TDR+ G+  NKKVD YL F+N  + G+GVPLP+GR+RV+KLD+ADGSLEFIGED+IDHTPK+E V++KLGSAFD+VGERRQV+F IDT    M EEIEVK+RN K +PV V+VKENLYRW+NWK+     ++DK+DARTI+FPV VA DGE VVRY VRY
Sbjct:  350 TDRSMGVEMNKKVDVYLEFKNDKQFGLGVPLPAGRLRVSKLDSADGSLEFIGEDKIDHTPKDEQVRVKLGSAFDVVGERRQVNFAIDTTAKWMEEEIEVKLRNHKSQPVEVVVKENLYRWSNWKVVTKTHNFDKEDARTINFPVKVAKDGETVVRYKVRY 509          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A7V4UAA2_9BACT (DUF4139 domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V4UAA2_9BACT)

HSP 1 Score: 228 bits (581), Expect = 1.630e-69
Identity = 110/164 (67.07%), Postives = 131/164 (79.88%), Query Frame = 1
Query:   28 GGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            G  +T+R YG+  NKKVD YL F+N    GMG+PLPSGRVRV+KLD ADGSLEFIGED IDHTP+NE V++KLGSAFD+VGERRQVDF+IDT R  M EEIE+KIRN KDE V V+V+E L+RW NW+I + +  ++K DARTI FPV V   GEAVVRY+VRY
Sbjct:  356 GAPLTERQYGVESNKKVDIYLQFKNSESIGMGMPLPSGRVRVSKLDPADGSLEFIGEDTIDHTPRNEEVRIKLGSAFDVVGERRQVDFRIDTGRKLMEEEIEIKIRNHKDEAVEVVVQERLFRWVNWEILKASHKHEKIDARTIKFPVKVDKSGEAVVRYSVRY 519          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: UPI0019A843B0 (DUF4139 domain-containing protein n=1 Tax=Aeromicrobium sp. TaxID=1871063 RepID=UPI0019A843B0)

HSP 1 Score: 227 bits (579), Expect = 2.340e-69
Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 1
Query:    1 YGQAGQWYG--GGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            YGQAG + G  G  MTDRN+G   NKKVD YL F+NR +  +G+PLP+G++RVAKLDTAD SLEFIGED IDHT +NET+QLKLGSAFD+VGERRQVDF+ D     M E+IE+KIRN+KD    VI+KENLYRW NW I   + +++K DART+HFP+ +A   EA VRYTVRY
Sbjct:  331 YGQAGWFNGYYGAPMTDRNFGNQSNKKVDVYLRFKNREDNKLGIPLPAGKIRVAKLDTADQSLEFIGEDLIDHTARNETIQLKLGSAFDVVGERRQVDFRADNAAKWMEEDIEIKIRNQKDVSTAVIIKENLYRWANWTIKTNSSNFEKIDARTVHFPLVIAKGAEATVRYTVRY 505          
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Match: A0A3M1E8H1_9BACT (DUF4139 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1E8H1_9BACT)

HSP 1 Score: 228 bits (581), Expect = 2.410e-69
Identity = 109/167 (65.27%), Postives = 131/167 (78.44%), Query Frame = 1
Query:   19 WYGGGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVRVAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKIDTNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDARTIHFPVTVAADGEAVVRYTVRY 519
            +Y GG MTDRN GIP NKKVD YL F+N    GMG+PLPSGR+RV + DTAD SLEFIGED IDHTPK+E V +K+GSAFD+VGER+Q+DF +D +R+ M E IE+K+RN KD+PVRV+VKE LYRW NW+I +    + K DARTIHFPV V  DGE  +RYTVRY
Sbjct:  370 YYYGGPMTDRNLGIPTNKKVDIYLRFKNEKAIGMGMPLPSGRIRVFQKDTADDSLEFIGEDTIDHTPKDEEVLVKMGSAFDVVGERKQIDFAVDYDRHWMKETIEIKLRNHKDKPVRVLVKETLYRWVNWEIVEHTHDFKKIDARTIHFPVRVDKDGEVTIRYTVRY 536          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53569.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00199D73321.900e-10892.49DUF4139 domain-containing protein n=1 Tax=Prolixib... [more]
A0A1F4DJ14_9PROT1.340e-7767.63Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1G1IH30_9BACT1.450e-7664.00Uncharacterized protein n=1 Tax=Nitrospirae bacter... [more]
A0A7C2UFZ6_9PROT6.450e-7369.57DUF4139 domain-containing protein n=1 Tax=Betaprot... [more]
A0A7V9LLH5_9BURK2.150e-7069.38DUF4139 domain-containing protein n=1 Tax=Burkhold... [more]
A0A838JJF2_9BURK2.840e-7064.02DUF4139 domain-containing protein n=1 Tax=Burkhold... [more]
UPI0019C5E74B3.280e-7068.13DUF4139 domain-containing protein n=1 Tax=Steroido... [more]
A0A7V4UAA2_9BACT1.630e-6967.07DUF4139 domain-containing protein n=1 Tax=Phycisph... [more]
UPI0019A843B02.340e-6963.43DUF4139 domain-containing protein n=1 Tax=Aeromicr... [more]
A0A3M1E8H1_9BACT2.410e-6965.27DUF4139 domain-containing protein n=1 Tax=Planctom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53569contigP-wetherbeei_contig53569:18..536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog523791.Kkor_1536
PFAMsDUF4139
Model size519
Max annot lvl135619|Oceanospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.37e-53
EggNOG OGsCOG5316@1|root,COG5316@2|Bacteria,1QCVP@1224|Proteobacteria,1RQFF@1236|Gammaproteobacteria,1XICC@135619|Oceanospirillales
DescriptionDomain of unknown function (DUF4139)
Cds size519
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186801.0891798-CDS-P-wetherbeei_contig53569:17..5361683186801.0891798-CDS-P-wetherbeei_contig53569:17..536Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53569 18..536 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53569.1.1prot_P-wetherbeei_contig53569.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53569 18..536 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53569.1.1

>prot_P-wetherbeei_contig53569.1.1 ID=prot_P-wetherbeei_contig53569.1.1|Name=mRNA_P-wetherbeei_contig53569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
YGQAGQWYGGGLMTDRNYGIPGNKKVDTYLSFRNRTEEGMGVPLPSGRVR
VAKLDTADGSLEFIGEDRIDHTPKNETVQLKLGSAFDLVGERRQVDFKID
TNRNTMTEEIEVKIRNRKDEPVRVIVKENLYRWTNWKITQTNQSYDKQDA
RTIHFPVTVAADGEAVVRYTVRY
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mRNA from alignment at P-wetherbeei_contig53569:18..536-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53569.1.1 ID=mRNA_P-wetherbeei_contig53569.1.1|Name=mRNA_P-wetherbeei_contig53569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig53569:18..536- (Phaeothamnion wetherbeei SAG_119_79)
TACGGTCAGGCCGGGCAGTGGTACGGCGGCGGACTGATGACCGACCGCAA CTACGGCATCCCCGGCAATAAGAAAGTCGATACCTATCTGTCATTCCGTA ACCGCACTGAAGAGGGCATGGGCGTGCCGCTGCCGTCCGGGCGCGTGCGC GTGGCCAAGCTCGACACGGCCGACGGCAGCCTGGAGTTCATCGGCGAGGA TCGCATCGACCACACGCCGAAGAACGAAACCGTGCAGCTGAAGCTCGGCA GCGCCTTCGACTTGGTCGGCGAGCGCCGCCAGGTGGACTTCAAGATCGAC ACCAACCGCAACACCATGACCGAGGAAATCGAAGTCAAGATCCGCAATCG CAAGGACGAGCCGGTGCGCGTGATCGTGAAGGAGAACCTCTACCGCTGGA CCAACTGGAAGATCACGCAAACGAACCAGTCCTACGATAAGCAGGACGCG CGAACGATCCATTTCCCGGTCACCGTCGCCGCCGATGGCGAGGCGGTGGT GCGCTACACGGTGAGGTAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53569:18..536-

>mRNA_P-wetherbeei_contig53569.1.1 ID=mRNA_P-wetherbeei_contig53569.1.1|Name=mRNA_P-wetherbeei_contig53569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig53569:18..536- (Phaeothamnion wetherbeei SAG_119_79)
TACGGTCAGGCCGGGCAGTGGTACGGCGGCGGACTGATGACCGACCGCAA
CTACGGCATCCCCGGCAATAAGAAAGTCGATACCTATCTGTCATTCCGTA
ACCGCACTGAAGAGGGCATGGGCGTGCCGCTGCCGTCCGGGCGCGTGCGC
GTGGCCAAGCTCGACACGGCCGACGGCAGCCTGGAGTTCATCGGCGAGGA
TCGCATCGACCACACGCCGAAGAACGAAACCGTGCAGCTGAAGCTCGGCA
GCGCCTTCGACTTGGTCGGCGAGCGCCGCCAGGTGGACTTCAAGATCGAC
ACCAACCGCAACACCATGACCGAGGAAATCGAAGTCAAGATCCGCAATCG
CAAGGACGAGCCGGTGCGCGTGATCGTGAAGGAGAACCTCTACCGCTGGA
CCAACTGGAAGATCACGCAAACGAACCAGTCCTACGATAAGCAGGACGCG
CGAACGATCCATTTCCCGGTCACCGTCGCCGCCGATGGCGAGGCGGTGGT
GCGCTACACGGTGAGGTAC
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