mRNA_P-wetherbeei_contig53562.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A3N5N3W8_9PROT (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5N3W8_9PROT) HSP 1 Score: 233 bits (593), Expect = 1.820e-72 Identity = 116/154 (75.32%), Postives = 133/154 (86.36%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYELFF DAEKAARLLDITLT RG+S GEPI+MAGVPYHAVEQYLAKLVK GE V ICEQ+GDP T+KGPVER+V RIVTPGTLTD+ALLDD+RDN+L+ + + + +G+AWL+LAAGR E NL+AELERLRPAEVLIAE
Sbjct: 16 LLFYRMGDFYELFFDDAEKAARLLDITLTTRGSSAGEPIRMAGVPYHAVEQYLAKLVKCGEPVVICEQVGDPATAKGPVERQVTRIVTPGTLTDAALLDDRRDNILMCIAEAEKKLGVAWLSLAAGRLGVLETDHANLSAELERLRPAEVLIAE 169
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A2M7J207_9PROT (DNA mismatch repair protein MutS (Fragment) n=2 Tax=Nitrosomonadales TaxID=32003 RepID=A0A2M7J207_9PROT) HSP 1 Score: 230 bits (587), Expect = 1.930e-72 Identity = 117/154 (75.97%), Postives = 135/154 (87.66%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYELFF DAE+AA+LLDITLT RG SNG+PIKMAGVPYHA EQYLA+LVKLGESVAICEQIGDP TSKGPVERKV+RIVTPGT+TDSALL +KRD+LLL L Q +G+AWL L++G+F +E A NL+AELERL+PAE+L AE
Sbjct: 36 LLFYRMGDFYELFFEDAERAAKLLDITLTQRGTSNGQPIKMAGVPYHAAEQYLARLVKLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDSALLAEKRDSLLLGLHQHHGKLGLAWLNLSSGQFFVSETDADNLSAELERLQPAEILHAE 189
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A849T8W0_9PROT (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Gallionella sp. TaxID=2052161 RepID=A0A849T8W0_9PROT) HSP 1 Score: 231 bits (588), Expect = 4.150e-72 Identity = 116/154 (75.32%), Postives = 136/154 (88.31%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYELF DA +AA+LLDITLT RG SNG+PIKMAGVPYHA EQYLA+LVK+GES+AICEQIGDP TSKGPVERKV+RIVTPGT+TDSALL++KRD+LLLAL Q+ N VG+AWL LA+G+F TEI A L AELERL+P+E+L +E
Sbjct: 28 LLFYRMGDFYELFHEDAARAAKLLDITLTHRGNSNGQPIKMAGVPYHAAEQYLARLVKMGESIAICEQIGDPATSKGPVERKVVRIVTPGTVTDSALLEEKRDSLLLALHQRNNEVGLAWLNLASGQFTLTEIAAKQLPAELERLQPSEILHSE 181
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A1F4DA17_9PROT (DNA mismatch repair protein MutS n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DA17_9PROT) HSP 1 Score: 240 bits (612), Expect = 7.700e-72 Identity = 121/154 (78.57%), Postives = 138/154 (89.61%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYE+F+ DAE+AARLLDITLT RGAS GE I+MAGVPYHAV+QYLAKLV+LGESVAICEQIGDPNTSKGPVER+V RIVTPGTLTDSALLDDKRDNLLLAL + TVG+AWL+LA+GRF EI +LA ELERLRP+E+L+A+
Sbjct: 16 LLFYRMGDFYEMFYDDAERAARLLDITLTTRGASAGEAIRMAGVPYHAVDQYLAKLVRLGESVAICEQIGDPNTSKGPVERQVTRIVTPGTLTDSALLDDKRDNLLLALHVHRATVGLAWLSLASGRFAVMEIVVADLANELERLRPSEILVAD 169
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A1F4E1H2_9PROT (DNA mismatch repair protein MutS n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4E1H2_9PROT) HSP 1 Score: 240 bits (612), Expect = 8.100e-72 Identity = 123/154 (79.87%), Postives = 135/154 (87.66%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYE+FF DAE+AARLLDI LT RGAS GEPIKMAGVPYH+VEQYLAKLVKLGESVAICEQIGDP TSKGPVER+V RIVTPGTLTDSALLDDKRDNLL AL + T G+AWL+LA+GRF A E NLA ELERLRP+E+LIA+
Sbjct: 16 LLFYRMGDFYEMFFDDAERAARLLDIALTTRGASAGEPIKMAGVPYHSVEQYLAKLVKLGESVAICEQIGDPATSKGPVERRVTRIVTPGTLTDSALLDDKRDNLLAALQVNRATAGLAWLSLASGRFCAIETAPANLADELERLRPSEILIAD 169
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A7V7XM42_9RHOO (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7V7XM42_9RHOO) HSP 1 Score: 226 bits (575), Expect = 1.750e-71 Identity = 117/152 (76.97%), Postives = 130/152 (85.53%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLI 456
L+FYRMGDFYELF+ DAEKAARLLDITLT RG S G PI+MAGVP+HAVEQYLA+LV+LGESV ICEQIGDP TSKGPVER V RIVTPGTLTDSALLDDK D+LLLAL ++N VG+AWL LA G FR EI LAA+LERLRPAE+L+
Sbjct: 16 LLFYRMGDFYELFYEDAEKAARLLDITLTTRGQSAGRPIRMAGVPFHAVEQYLARLVRLGESVVICEQIGDPATSKGPVERAVTRIVTPGTLTDSALLDDKSDSLLLALAPEKNLVGLAWLNLANGDFRLLEIGPGALAAQLERLRPAEILV 167
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A5C9BI94_9PROT (DNA mismatch repair protein MutS n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A5C9BI94_9PROT) HSP 1 Score: 236 bits (602), Expect = 4.400e-71 Identity = 118/154 (76.62%), Postives = 136/154 (88.31%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYELF+ DAE+AARLLDITLT RGASNG+PIKMAGVPYHA EQYLA+L+KLGESVAICEQIGDP SKGPVERKV+RIVTPGTLTDSALL++KRD+LLLAL Q +N +G+AWL LA+G+ EI A L AELERL+P+E+L AE
Sbjct: 16 LLFYRMGDFYELFYEDAERAARLLDITLTQRGASNGQPIKMAGVPYHAAEQYLARLIKLGESVAICEQIGDPAASKGPVERKVVRIVTPGTLTDSALLEEKRDSLLLALHQNRNEIGLAWLNLASGQLTLAEISASQLPAELERLQPSEILFAE 169
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A7C2UHN4_9PROT (DNA mismatch repair protein MutS n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UHN4_9PROT) HSP 1 Score: 238 bits (606), Expect = 6.280e-71 Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYE+F+ DAE+AARLLDITLT RGAS GEPI+MAGVPYH+VEQYLAKLVKLGESVAICEQIGDPN SKGPVERKV R+VTPGTLTDSALL++KRDN+LLAL ++ T G+AWL+LA+GRF E NLA ELERLRP+E+LI+E
Sbjct: 16 LLFYRMGDFYEMFYDDAERAARLLDITLTTRGASAGEPIRMAGVPYHSVEQYLAKLVKLGESVAICEQIGDPNMSKGPVERKVTRVVTPGTLTDSALLEEKRDNVLLALNLQRATAGLAWLSLASGRFSVMETVTANLANELERLRPSEILISE 169
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A7Y8JCZ3_9RHOO (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7Y8JCZ3_9RHOO) HSP 1 Score: 226 bits (575), Expect = 2.060e-70 Identity = 115/154 (74.68%), Postives = 132/154 (85.71%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYELF+ DAEKAARLLDITLT RG S G PI MAGVPYHAVEQYLA+LV+LGESVAICEQIGDP SKGPVER+V+RIVTPGTLTD+ALLDDK D+LLLAL Q++ +G+AWL LA+G R TE A L A+L RL+PAE+L+AE
Sbjct: 15 LLFYRMGDFYELFYDDAEKAARLLDITLTRRGQSAGAPIPMAGVPYHAVEQYLARLVRLGESVAICEQIGDPAASKGPVERQVVRIVTPGTLTDAALLDDKSDSLLLALVQERQRIGLAWLNLASGALRLTETSAAALPAQLGRLKPAEILLAE 168
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Match: A0A7Y4W848_9PROT (DNA mismatch repair protein MutS n=2 Tax=Sideroxydans sp. TaxID=2067989 RepID=A0A7Y4W848_9PROT) HSP 1 Score: 236 bits (601), Expect = 2.490e-70 Identity = 117/154 (75.97%), Postives = 136/154 (88.31%), Query Frame = 1
Query: 1 LVFYRMGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKLVKLGESVAICEQIGDPNTSKGPVERKVLRIVTPGTLTDSALLDDKRDNLLLALWQKQNTVGIAWLALAAGRFRATEIKAVNLAAELERLRPAEVLIAE 462
L+FYRMGDFYELF DA + A+LLDITLT RGASNG+PIKMAGVPYHA EQYLA+LVK+GESVAICEQIGDP TSKGPVERKV+RIVTPGT+TDSALL++KRDNLLLAL Q+ N VG+AWL LA+G+F E+ A L AELERL+P+E+L+AE
Sbjct: 16 LLFYRMGDFYELFMDDAVRVAKLLDITLTQRGASNGQPIKMAGVPYHAAEQYLARLVKMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDSALLEEKRDNLLLALHQRNNEVGLAWLNLASGQFTLAEVAASQLPAELERLQPSEILVAE 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53562.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53562.1.1 >prot_P-wetherbeei_contig53562.1.1 ID=prot_P-wetherbeei_contig53562.1.1|Name=mRNA_P-wetherbeei_contig53562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MGDFYELFFGDAEKAARLLDITLTARGASNGEPIKMAGVPYHAVEQYLAKback to top mRNA from alignment at P-wetherbeei_contig53562:76..537- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53562.1.1 ID=mRNA_P-wetherbeei_contig53562.1.1|Name=mRNA_P-wetherbeei_contig53562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig53562:76..537- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53562:76..537- >mRNA_P-wetherbeei_contig53562.1.1 ID=mRNA_P-wetherbeei_contig53562.1.1|Name=mRNA_P-wetherbeei_contig53562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig53562:76..537- (Phaeothamnion wetherbeei SAG_119_79)back to top |