mRNA_P-wetherbeei_contig5355.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A7S0EUF7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EUF7_9EUKA) HSP 1 Score: 110 bits (274), Expect = 9.880e-26 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 10 VLEVKASRDGRHLLMQAEGGRIHLWDVAEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGLR 357
+ + SRD RHLL+ IH WD+A ++++ + G +QGR+++ + FGG ++AFV SGS HSGTV+AVAWNP DP+++A+ASDD+TVR+WG++
Sbjct: 420 ITSLSLSRDSRHLLVNTASEGIHAWDLATKQLIHRYQGQKQGRFVIRSVFGGCNEAFVVSGSEDSQIYVWHRHNATLLEVLAGHSGTVNAVAWNPRDPYMMASASDDQTVRIWGVQ 535
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A7S0INT6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0INT6_9EUKA) HSP 1 Score: 109 bits (273), Expect = 1.590e-25 Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 1
Query: 10 VLEVKASRDGRHLLMQAEGGRIHLWDVAEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
+ + S D R+LL+ IH WD+ E+ V+ ++ G +QGR+++ + FGG +DAFV SGS HSGTV+AVAWNP DPH+ A+ SDD TVRVWGL
Sbjct: 470 ITSLSLSNDSRYLLVNVASEEIHAWDLNERHVLHKYRGQKQGRFIIRSAFGGVNDAFVVSGSEDSQVYIWHRHNSALLEVLPGHSGTVNAVAWNPCDPHMFASCSDDHTVRVWGL 584
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A7S0PVY6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PVY6_9EUKA) HSP 1 Score: 107 bits (268), Expect = 1.960e-25 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 4 GLVLEVKASRDGRHLLMQAEGGRIHLWDVAEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
G + + S D R LL+ IH WD+ E+ ++ ++TG +QGR+++ + FGG +DA V SGS HSG+V+AVAWNP DPH+ A+ SDD TVRVWGL
Sbjct: 259 GAITSLSLSTDSRFLLLNVASEEIHAWDMHERHMLQKYTGQKQGRFIIRSAFGGLNDAVVVSGSEDSQVYIWHRHDGALLEVLPGHSGSVNAVAWNPCDPHMFASCSDDHTVRVWGL 375
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: D8T5N4_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T5N4_SELML) HSP 1 Score: 107 bits (268), Expect = 6.810e-25 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 10 VLEVKASRDGRHLLMQAEGGRIHLWDVA-EQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
+ + S DGR+LL+ IHLWD+A R ++ GHRQGRY++ + FGG D AF+ SGS HSGTV+ V+WNP++PH+ A+ASDD T+R+WGL
Sbjct: 391 ITSLSVSLDGRYLLVNLVSQEIHLWDMALNSRSPCKYKGHRQGRYVIRSCFGGSDHAFIVSGSEDSQVYIWHRGNGELLEVLPGHSGTVNCVSWNPSNPHMFASASDDHTIRIWGL 506
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A7S4J282_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J282_9EUKA) HSP 1 Score: 98.6 bits (244), Expect = 1.730e-24 Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 73 IHLWDVAEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
IH WD+ + +V + G +QGR+++ + FGG D+AFV SGS HSGTV+A+AWNP DPH+ A+ASDD TVRVWG+
Sbjct: 1 IHAWDLQAKALVHRYRGQKQGRFVIRSAFGGHDEAFVVSGSEDSQVYIWNRHSGALLEVLPGHSGTVNAIAWNPTDPHMFASASDDHTVRVWGV 94
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A6J1BZ91_MOMCH (uncharacterized WD repeat-containing protein C343.04c-like n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1BZ91_MOMCH) HSP 1 Score: 106 bits (265), Expect = 1.950e-24 Identity = 48/117 (41.03%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 7 LVLEVKASRDGRHLLMQAEGGRIHLWDV-AEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
++ + SRD + LL+ IHLW++ E V+ +TGH++ R+++ + FGG D AF+ASGS HSG+V+ V+WNPA+PH+LA+ASDDRT+R+WGL
Sbjct: 444 IITSFQLSRDNKFLLVNLSNQEIHLWNLEGEAEVITSYTGHKRTRFVIRSCFGGLDQAFIASGSEDSLVYIWHKGTGELIEALEGHSGSVNCVSWNPANPHMLASASDDRTIRIWGL 560
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A261XXQ9_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XXQ9_9FUNG) HSP 1 Score: 106 bits (264), Expect = 1.980e-24 Identity = 51/117 (43.59%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 4 GLVLEVKASRDGRHLLMQAEGGRIHLWDVAEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
GLV + SRDGR++L+ G IHLWD+ + V+ +TGH+Q R ++ + GG D+ FVASGS H V++VAW+P PH+LA+ASDDRTVR+WGL
Sbjct: 384 GLVTCLNLSRDGRYMLISLISGPIHLWDLEIRAVIRRYTGHQQDRMVIRSCLGGIDEKFVASGSTDGKVYIWHRYLEQLVHVLEGHKEMVNSVAWHPTHPHMLASASDDRTVRIWGL 500
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A6P6S9C4_COFAR (WD repeat-containing protein 26 homolog n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6S9C4_COFAR) HSP 1 Score: 106 bits (264), Expect = 2.640e-24 Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 7 LVLEVKASRDGRHLLMQAEGGRIHLWDV-AEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGLR 357
+++ SRDG+ LL+ IHLW++ R++ ++ GH++ R+++ + FGG + AFVASGS HSGTV+ V+WNP++PH+LA+ASDDRT+R+WGL+
Sbjct: 443 IIISFALSRDGKSLLVSLLNEEIHLWNIEGHVRLLAKYKGHKRSRFVIRSCFGGLEQAFVASGSEDSQVYIWHRSSGELVMTLPGHSGTVNCVSWNPSNPHMLASASDDRTIRIWGLK 560
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A392NKU6_9FABA (WD repeat-containing protein 26-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NKU6_9FABA) HSP 1 Score: 100 bits (250), Expect = 3.470e-24 Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 7 LVLEVKASRDGRHLLMQAEGGRIHLWDV-AEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGLR 357
++ S+D R LL+ IHLW++ + ++VG++ HR+ R+++ + FGG +F++SGS HSG V+ V+WNPA+PH+LA+ASDDRTVR+WGL+
Sbjct: 64 IITSFSLSKDSRFLLVNLLNQEIHLWNIQGDPKLVGKYKSHRRSRFVIRSCFGGVKQSFISSGSEDSQVYIWHRNSGDLVDALPGHSGAVNCVSWNPANPHMLASASDDRTVRIWGLK 181
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Match: A0A7J8X7M7_GOSAI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8X7M7_GOSAI) HSP 1 Score: 103 bits (257), Expect = 3.590e-24 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 7 LVLEVKASRDGRHLLMQAEGGRIHLWDV-AEQRVVGEFTGHRQGRYMLHATFGGRDDAFVASGSXXXXXXXXXXXXXXXXXXXXXHSGTVSAVAWNPADPHVLATASDDRTVRVWGL 354
L+ SRD R LL+ IHLW++ + ++V ++ GH++ R+++ + FGG + AF+ASGS HSG V+ V+WNPA+PH+LA+ASDDRT+R+WGL
Sbjct: 190 LITSFSLSRDSRFLLINLLNQEIHLWNIEGDPKLVSKYRGHKRTRFIIRSCFGGLEQAFIASGSEDSLVYIWHRGTGELIETLPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 306 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5355.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5355.4.1 >prot_P-wetherbeei_contig5355.4.1 ID=prot_P-wetherbeei_contig5355.4.1|Name=mRNA_P-wetherbeei_contig5355.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp GGLVLEVKASRDGRHLLMQAEGGRIHLWDVAEQRVVGEFTGHRQGRYMLHback to top mRNA from alignment at P-wetherbeei_contig5355:3107..3833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5355.4.1 ID=mRNA_P-wetherbeei_contig5355.4.1|Name=mRNA_P-wetherbeei_contig5355.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=727bp|location=Sequence derived from alignment at P-wetherbeei_contig5355:3107..3833+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5355:3107..3833+ >mRNA_P-wetherbeei_contig5355.4.1 ID=mRNA_P-wetherbeei_contig5355.4.1|Name=mRNA_P-wetherbeei_contig5355.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig5355:3107..3833+ (Phaeothamnion wetherbeei SAG_119_79)back to top |