mRNA_P-wetherbeei_contig53514.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53514.1.1
Unique NamemRNA_P-wetherbeei_contig53514.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: W4L3I6_9BACT (Bac_luciferase domain-containing protein n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4L3I6_9BACT)

HSP 1 Score: 206 bits (525), Expect = 2.920e-65
Identity = 90/119 (75.63%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M++GVFMMPSHPPERD   G +WDLEH+ L D+LGF EAWIGEHFTAPWEPNPAPD+LIAQAL+RT++IKLA GAHLLPYHHP ELA R+AF+DH+A+GR M GVG+ GLPSDW  FNV
Sbjct:    1 MKLGVFMMPSHPPERDFYAGHQWDLEHLELIDQLGFDEAWIGEHFTAPWEPNPAPDLLIAQALLRTQQIKLAPGAHLLPYHHPVELAHRVAFLDHMAQGRFMLGVGSSGLPSDWKLFNV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A7V3F8U0_9BACT (LLM class flavin-dependent oxidoreductase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3F8U0_9BACT)

HSP 1 Score: 202 bits (513), Expect = 5.370e-62
Identity = 88/119 (73.95%), Postives = 103/119 (86.55%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M+ G+FMMPSHPPER L E  +WDL+++ L D LGF EAWIGEHFT+PWEP PAPDI+IAQALMRT RIKLA GAHLLP+HHPAELA R+A++DH+A+GR MFG+GA GLPSDWA FNV
Sbjct:    1 MKFGLFMMPSHPPERSLYEAHQWDLDYLCLADELGFEEAWIGEHFTSPWEPIPAPDIMIAQALMRTTRIKLATGAHLLPFHHPAELAHRVAYLDHLAQGRFMFGIGASGLPSDWALFNV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A6N8ZAA9_9CHLR (LLM class flavin-dependent oxidoreductase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8ZAA9_9CHLR)

HSP 1 Score: 201 bits (511), Expect = 1.160e-61
Identity = 85/119 (71.43%), Postives = 107/119 (89.92%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M+ G+FMMPSHPPER++ +  +WDL+++TLCD LGF EAWIGEHFT+PWEP PAPD+LIAQALM+T+RIKL +GAHLLP+HHPAELA R+A++DHI++GR +FGVGA GLPSDWA F+V
Sbjct:    1 MKYGLFMMPSHPPERNIYDAHQWDLQYLTLCDELGFDEAWIGEHFTSPWEPIPAPDLLIAQALMQTKRIKLGSGAHLLPFHHPAELAHRVAYLDHISQGRFLFGVGASGLPSDWALFDV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A7Y4U122_9DELT (LLM class flavin-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U122_9DELT)

HSP 1 Score: 199 bits (507), Expect = 3.970e-61
Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M+ GVFMMPSHPPER   EG  WDL+ + LCD+LGF EAW+GEHFTAPWEPNPAPD+L+AQA++RT+ IKL  GAHLLPYHHPAELA R+AF+DH+++GR+M GVG  GLPSDW  FNV
Sbjct:    1 MKAGVFMMPSHPPERSFYEGHCWDLDQLALCDQLGFHEAWVGEHFTAPWEPNPAPDLLLAQAILRTKNIKLCPGAHLLPYHHPAELAHRVAFLDHMSQGRVMLGVGTSGLPSDWKLFNV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A2E8F4G5_9PLAN (Alkane 1-monooxygenase n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8F4G5_9PLAN)

HSP 1 Score: 198 bits (504), Expect = 1.220e-60
Identity = 85/119 (71.43%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M  G+FMMPSHPPER + +  +WDL++++L D LG+ EAWIGEHFTAPWEP P+PDI+IAQALMRT+RIKLA GAHLLP+HHPAELA R+A++DHIA+GR MFGVGA GLP+DWA F+V
Sbjct:    1 MNYGLFMMPSHPPERSIYDAHQWDLDYLSLADELGYDEAWIGEHFTAPWEPIPSPDIMIAQALMRTKRIKLAPGAHLLPFHHPAELAHRVAYLDHIAQGRFMFGVGASGLPTDWAMFDV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A6N8YXR6_9CHLR (LLM class flavin-dependent oxidoreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8YXR6_9CHLR)

HSP 1 Score: 196 bits (497), Expect = 1.370e-59
Identity = 82/119 (68.91%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M++G+FMMPSHPPER++ +  +WDL+++ L DRLG+ EAWIGEHFTAPWEP PAPD++IAQAL RT RIKL +G HLLPYHHPAELA R+A++DH+A+GR MFG+G+ GLPSDWA F+V
Sbjct:    1 MKLGLFMMPSHPPERNIFDSHQWDLDYLELADRLGYDEAWIGEHFTAPWEPIPAPDLMIAQALQRTSRIKLGSGVHLLPYHHPAELAHRVAYLDHMAQGRFMFGIGSSGLPSDWALFDV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A257PJU1_9PROT (Alkane 1-monooxygenase (Fragment) n=1 Tax=Rhodospirillales bacterium 20-64-7 TaxID=1970566 RepID=A0A257PJU1_9PROT)

HSP 1 Score: 188 bits (477), Expect = 1.750e-59
Identity = 81/119 (68.07%), Postives = 99/119 (83.19%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            ME+G F MPSHPPER L+ G +WDL+ +   D LG+SEAWIGEH TAPWEPNPAPD+LIAQAL++T+R+++  G  LLPYHHPAELA R+A +DH+++GRLMFGV A GLPSDWA FNV
Sbjct:    1 MELGYFTMPSHPPERGLKAGQDWDLQTMRWLDELGYSEAWIGEHHTAPWEPNPAPDLLIAQALLQTKRLRIGPGGFLLPYHHPAELANRVAMLDHLSEGRLMFGVAASGLPSDWAMFNV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A2E2DQ99_9CHLR (Alkane 1-monooxygenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E2DQ99_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 1.100e-58
Identity = 83/119 (69.75%), Postives = 103/119 (86.55%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M  G+FMMPSHPPER+L +  +WDL+ ++L D LG+ EAWIGEHFT+PWEP PAPD++IAQALMRT+ IKLA G HLLPYHHPAELA R+A++DH+A+GR MFG+G+GGLPSD+A FNV
Sbjct:    1 MRYGMFMMPSHPPERELFQAHQWDLDCLSLADDLGYDEAWIGEHFTSPWEPIPAPDLMIAQALMRTKNIKLATGVHLLPYHHPAELAHRVAYLDHLAQGRFMFGIGSGGLPSDYALFNV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A6L3C8T0_9CHLR (LLM class flavin-dependent oxidoreductase (Fragment) n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A6L3C8T0_9CHLR)

HSP 1 Score: 186 bits (472), Expect = 2.330e-58
Identity = 78/119 (65.55%), Postives = 102/119 (85.71%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M+ GVFMMPSHPPER++ +  +WDL+ + L D+LGFSEAWIGEH+TAPWEP P+PD++IAQALM T+ I+L  G HLLPYHHPAELA R+A++DH+A+GR MFG+G+GGLP+D+  F+V
Sbjct:    1 MQYGVFMMPSHPPEREVFQAHKWDLDCLVLADKLGFSEAWIGEHYTAPWEPIPSPDLMIAQALMLTKDIRLGTGVHLLPYHHPAELACRVAYLDHLAQGRFMFGIGSGGLPTDYTMFDV 119          
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Match: A0A7V1W1K7_9CHLR (LLM class flavin-dependent oxidoreductase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1W1K7_9CHLR)

HSP 1 Score: 192 bits (489), Expect = 2.490e-58
Identity = 83/119 (69.75%), Postives = 100/119 (84.03%), Query Frame = 1
Query:    1 MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWEPNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGRLMFGVGAGGLPSDWAQFNV 357
            M++G+FMMPSHPPERD   G +WDL+ +   D  GF EAWIGEH+T+PWEPNP+PD+LIAQAL++T RIKLA G HLLPYHHPAELA R+AF+DH+A+GRLMFGV A GLPSDW  F+V
Sbjct:    1 MKLGLFMMPSHPPERDFYSGQQWDLQVLRWADEYGFGEAWIGEHYTSPWEPNPSPDLLIAQALLQTRRIKLAPGGHLLPYHHPAELACRVAFLDHLAQGRLMFGVAASGLPSDWKMFDV 119          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53514.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4L3I6_9BACT2.920e-6575.63Bac_luciferase domain-containing protein n=1 Tax=C... [more]
A0A7V3F8U0_9BACT5.370e-6273.95LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A6N8ZAA9_9CHLR1.160e-6171.43LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A7Y4U122_9DELT3.970e-6171.43LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A2E8F4G5_9PLAN1.220e-6071.43Alkane 1-monooxygenase n=3 Tax=Bacteria TaxID=2 Re... [more]
A0A6N8YXR6_9CHLR1.370e-5968.91LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A257PJU1_9PROT1.750e-5968.07Alkane 1-monooxygenase (Fragment) n=1 Tax=Rhodospi... [more]
A0A2E2DQ99_9CHLR1.100e-5869.75Alkane 1-monooxygenase n=1 Tax=Chloroflexi bacteri... [more]
A0A6L3C8T0_9CHLR2.330e-5865.55LLM class flavin-dependent oxidoreductase (Fragmen... [more]
A0A7V1W1K7_9CHLR2.490e-5869.75LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53514contigP-wetherbeei_contig53514:3..359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1429916.X566_22485
Preferred nameMA20_04750
PFAMsBac_luciferase
Model size357
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K21731
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-56
EggNOG OGsCOG2141@1|root,COG2141@2|Bacteria,1MX64@1224|Proteobacteria,2TT8C@28211|Alphaproteobacteria,3JSF0@41294|Bradyrhizobiaceae
EC1.14.13.162
DescriptionLuciferase-like monooxygenase
Cds size357
COG categoryC
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186800.384982-CDS-P-wetherbeei_contig53514:2..3591683186800.384982-CDS-P-wetherbeei_contig53514:2..359Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53514 3..359 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53514.1.1prot_P-wetherbeei_contig53514.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53514 3..359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53514.1.1

>prot_P-wetherbeei_contig53514.1.1 ID=prot_P-wetherbeei_contig53514.1.1|Name=mRNA_P-wetherbeei_contig53514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
MEVGVFMMPSHPPERDLREGFEWDLEHITLCDRLGFSEAWIGEHFTAPWE
PNPAPDILIAQALMRTERIKLAAGAHLLPYHHPAELAGRIAFMDHIAKGR
LMFGVGAGGLPSDWAQFNV
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mRNA from alignment at P-wetherbeei_contig53514:3..359-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53514.1.1 ID=mRNA_P-wetherbeei_contig53514.1.1|Name=mRNA_P-wetherbeei_contig53514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig53514:3..359- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAGTCGGAGTATTCATGATGCCGTCCCATCCACCGGAGCGCGATCT GCGCGAAGGTTTTGAATGGGACCTGGAACACATCACCTTGTGCGATCGTC TGGGCTTTTCCGAAGCCTGGATAGGCGAGCACTTCACCGCGCCCTGGGAA CCGAATCCCGCGCCCGACATCCTGATTGCCCAGGCGCTGATGCGCACCGA GCGCATCAAGCTCGCGGCCGGCGCCCATCTGCTGCCCTACCATCATCCGG CGGAACTGGCCGGCCGTATTGCCTTCATGGATCACATTGCCAAGGGGCGC TTGATGTTCGGCGTCGGTGCCGGCGGCCTGCCGAGTGACTGGGCGCAATT CAATGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53514:3..359-

>mRNA_P-wetherbeei_contig53514.1.1 ID=mRNA_P-wetherbeei_contig53514.1.1|Name=mRNA_P-wetherbeei_contig53514.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig53514:3..359- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAGTCGGAGTATTCATGATGCCGTCCCATCCACCGGAGCGCGATCT
GCGCGAAGGTTTTGAATGGGACCTGGAACACATCACCTTGTGCGATCGTC
TGGGCTTTTCCGAAGCCTGGATAGGCGAGCACTTCACCGCGCCCTGGGAA
CCGAATCCCGCGCCCGACATCCTGATTGCCCAGGCGCTGATGCGCACCGA
GCGCATCAAGCTCGCGGCCGGCGCCCATCTGCTGCCCTACCATCATCCGG
CGGAACTGGCCGGCCGTATTGCCTTCATGGATCACATTGCCAAGGGGCGC
TTGATGTTCGGCGTCGGTGCCGGCGGCCTGCCGAGTGACTGGGCGCAATT
CAATGTT
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