mRNA_P-wetherbeei_contig53470.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53470.1.1
Unique NamemRNA_P-wetherbeei_contig53470.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7V8VXX4_9CHLR (Class F sortase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VXX4_9CHLR)

HSP 1 Score: 168 bits (425), Expect = 3.130e-46
Identity = 85/158 (53.80%), Postives = 103/158 (65.19%), Query Frame = 1
Query:    1 SCARGQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAASV-APTDRETLTLMTCGGEWDSTISEYDSRTVVTAVRVPNPEAAQG 471
            +C RG VPA IAI A  V A  E+ E +GGV++ PT    V WYK + RLGE GN V+AGHLNYWGVPEGVFF L AL+ GD I +TG D  T +Y V  VR     + P+  V A T  E+LTL+TCGGEWD ++SEY+ RTV  AVR+    A  G
Sbjct:  439 ACVRGAVPARIAIEAANVDAEVEILETLGGVMEPPTGAEDVAWYKETARLGEPGNIVMAGHLNYWGVPEGVFFSLGALRAGDTIELTGDDDETLSYRVEWVRQEDATQPPSDEVLASTGAESLTLITCGGEWDPSVSEYNERTVARAVRIAEDSADAG 596          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A838GGR3_9CHLR (Class F sortase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GGR3_9CHLR)

HSP 1 Score: 162 bits (409), Expect = 7.820e-46
Identity = 83/157 (52.87%), Postives = 105/157 (66.88%), Query Frame = 1
Query:    4 CARGQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAASV-APTDRETLTLMTCGGEWDSTISEYDSRTVVTAVRVPN---PEA 462
            C RG VP ++ I AI+V A  E+ E VGGV+Q+P+DE  V WYK + RLGETGN ++AGHLN+WG PE VFF L  L++GD + +   +   +TY V  VR     E PA  V   T  E +TLMTCGG+WDS+ISEYD RTVV A+RV +   PEA
Sbjct:  193 CPRGAVPFNLKIEAIEVDAPVEILETVGGVMQQPSDEAHVAWYKETARLGETGNLLIAGHLNWWGHPEAVFFDLGTLREGDEVVLLDEEENAFTYEVEWVRQESNLEPPAEEVLGMTGYEAVTLMTCGGQWDSSISEYDERTVVRAMRVADEGTPEA 349          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7W0AAR0_9CHLR (Class F sortase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0AAR0_9CHLR)

HSP 1 Score: 168 bits (425), Expect = 2.320e-45
Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 1
Query:    4 CARGQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAASV-APTDRETLTLMTCGGEWDSTISEYDSRTVVTAVRVP---NPEAA 465
            C RG VPA + I +I V+A  E+ E VGGV+Q+P+DEN V WYK + RLGE GN ++AGHLN+WGVPE VFF L  L++G  + +   DG  YTYAV  VR     E P+  V   TD E +TL+TCGGEWD++ISEYD RTV  A RV     PEAA
Sbjct:  729 CFRGAVPAGLTIASIGVEAPVEILETVGGVMQQPSDENHVAWYKETARLGELGNILIAGHLNWWGVPEAVFFALGTLEEGAEVVLVDEDGDAYTYAVEWVRQESNLEPPSEEVLGMTDYEAVTLITCGGEWDNSISEYDERTVARARRVAASGTPEAA 886          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7V9VIX2_9CHLR (Sortase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VIX2_9CHLR)

HSP 1 Score: 167 bits (422), Expect = 7.200e-45
Identity = 81/149 (54.36%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 SCARGQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIA-EGPAASVAPTDRETLTLMTCGGEWDSTISEYDSRTVVTAVR 444
            +CA G VP +I IP I+V A  E+ E VGG++Q PT    V WYK S RLGE GN ++AGHLNYWGVPEGVFF+L AL +GD+I + G DG  Y Y V  V  +    E P  ++  TD ++LTL+TCGGEW+   +EYD RTVV AVR
Sbjct:  976 ACACGAVPVTITIPVIEVDAGIEILETVGGIMQAPTGAEDVAWYKESARLGEQGNILMAGHLNYWGVPEGVFFRLEALTEGDVIEVEGDDGSAYRYIVEWVEQLESEQEPPEDAIGHTDNQSLTLITCGGEWNVDAAEYDHRTVVRAVR 1124          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7W0S9P6_9CHLR (Sortase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0S9P6_9CHLR)

HSP 1 Score: 129 bits (323), Expect = 2.460e-33
Identity = 70/160 (43.75%), Postives = 95/160 (59.38%), Query Frame = 1
Query:   10 RGQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAAS----VAPTDRETLTLMTCGGEWDSTISEYDSRTVVTAVRVPNPEAAQGGA 477
            RG +P +I IP   V +  E  EI+ GV+Q+P+   VV+WY+ S RLG  GN V+AGH++YW V   VF+ +  L+ G  I ITG +G +Y Y V  V++  + E  +      V PT  E LTL+TCGG++D    EY SRT+V A RV   E A  GA
Sbjct:   58 RGVLPLAIQIPDAAVDSEVEQVEIIAGVMQDPSGPFVVSWYRESGRLGSRGNAVMAGHVDYWDVGPAVFYTVGQLQPGASIAITGEEGISYRYEVEWVQTYSLTELTSDLIQDLVGPTKNEVLTLITCGGDFDYATGEYLSRTIVRAKRVSATEIAGVGA 217          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7V8X804_9CHLR (Class F sortase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X804_9CHLR)

HSP 1 Score: 125 bits (313), Expect = 2.270e-32
Identity = 70/163 (42.94%), Postives = 93/163 (57.06%), Query Frame = 1
Query:   13 GQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAE-GPAAS---VAPTDRETLTLMTCGGEWDSTISEYDSRTVVTA----VRVPNPEAAQGGA 477
            G  P SI +P   V A  E+ +IV GV+ +P+   VV+WY+ +  LGE  N V++GH++YW V   VF+ +  L +   I + G DG TYTYAV  V+   +AE  P A    V PTD   LTL+TCGGE+D+   EY SRT+V A      VP   A   GA
Sbjct:   58 GSAPVSIQVPDASVDAEVELNQIVDGVMLDPSGPYVVSWYEETGMLGELDNVVMSGHVDYWEVGPAVFYTVAQLGENAQIQVAGDDGSTYTYAVEWVQDYDVAELTPEAIRDIVGPTDYRALTLITCGGEFDTNSGEYLSRTIVRARLIDANVPAASADAAGA 220          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7V8VWU1_9CHLR (Class F sortase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VWU1_9CHLR)

HSP 1 Score: 122 bits (307), Expect = 1.660e-31
Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 1
Query:   22 PASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAAS----VAPTDRETLTLMTCGGEWDSTISEYDSRTVVTA 438
            P +IA    ++ A  E  +I+ GV+Q PT   VV WY+ + +LGE GN V+AGH++YWGV   VFF +  L + D + +TG+DG  +TYAV S+ +V + E  +      V P   + LTL+TCGGE+D    EY SRT + A
Sbjct:  103 PVAIASEPAEIDAEVETLQILDGVMQNPTGPWVVAWYEQTAQLGEPGNVVMAGHVDYWGVGPSVFFNVKDLAEDDEVALTGSDGSIHTYAVDSIETVGVEELTSGRIGELVGPVPGQALTLITCGGEFDYVNGEYLSRTAIRA 245          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A6J4V8P7_9CHLR (Uncharacterized protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4V8P7_9CHLR)

HSP 1 Score: 120 bits (302), Expect = 4.390e-31
Identity = 63/145 (43.45%), Postives = 84/145 (57.93%), Query Frame = 1
Query:   13 GQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAASVAPTDR-ETLTLMTCGGEWDSTISEYDSRTVVTAVR 444
            G  P ++ I    V+A  E   IV G +Q+PT   VV WY++   LGE GN V+AGH++YW V   VF+ ++ L +GD I +TGADG  Y YAV  VR    A+ P   +   +  + LTL+TCGG +D    EY  RTVV A R
Sbjct:   82 GAQPVALRIERAAVEAEIEPLAIVDGAMQDPTGPWVVAWYEDLAALGEGGNVVMAGHIDYWNVGPAVFYTIDDLAEGDPIAVTGADGEVYDYAVEWVREYDAADAPLEEIVGREAGDALTLITCGGAFDYATGEYLQRTVVRASR 226          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A7W0TVH5_9CHLR (Class F sortase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TVH5_9CHLR)

HSP 1 Score: 120 bits (301), Expect = 7.020e-31
Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 1
Query:   13 GQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAASVAPTD-RETLTLMTCGGEWDSTISEYDSRTVVTAVR 444
            G  P  + I  I V A  E  +++ G++Q+P+    V WY+N   LG+ GN V+AGH++YW V   VF+ L AL +GD I + GADG  Y YAV   R    A  P   +  TD +E+LTL+TCGG +D   ++Y  RTVV A R
Sbjct:   89 GVEPVGLRIDTIGVDAGVEALQVIDGLMQDPSGPWTVAWYENLGALGQGGNVVMAGHIDYWNVGPSVFYDLAALAEGDAIAVFGADGQEYAYAVEWRRQYDAANAPLDEIVGTDGQESLTLITCGGTFDYQNAQYLQRTVVRAGR 233          
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Match: A0A6J4VCX3_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VCX3_9CHLR)

HSP 1 Score: 119 bits (299), Expect = 1.150e-30
Identity = 58/128 (45.31%), Postives = 82/128 (64.06%), Query Frame = 1
Query:   22 PASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRLGETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTSVRSVPIAEGPAASVA----PTDRETLTLMTCGGEW 393
            P +I   + Q+ A  EV +IV GV+Q PT   VV WY+ + +LGE GN V+AGH++YWGV   VFF +  L QGD + +TG+D   +TYAV S+ ++ + E     +A    PT  +TLTL+TCGGE+
Sbjct:  101 PVAIVSDSAQIDAEVEVLQIVDGVMQNPTGPWVVAWYEQTAQLGEPGNVVMAGHVDYWGVGPSVFFNVKNLAQGDEVALTGSDDSIHTYAVESIETIGVEELTRGRIAELVGPTPGQTLTLITCGGEF 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53470.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V8VXX4_9CHLR3.130e-4653.80Class F sortase n=1 Tax=Chloroflexia bacterium Tax... [more]
A0A838GGR3_9CHLR7.820e-4652.87Class F sortase n=1 Tax=Chloroflexia bacterium Tax... [more]
A0A7W0AAR0_9CHLR2.320e-4554.43Class F sortase n=1 Tax=Chloroflexia bacterium Tax... [more]
A0A7V9VIX2_9CHLR7.200e-4554.36Sortase (Fragment) n=1 Tax=Chloroflexia bacterium ... [more]
A0A7W0S9P6_9CHLR2.460e-3343.75Sortase n=1 Tax=Chloroflexia bacterium TaxID=24487... [more]
A0A7V8X804_9CHLR2.270e-3242.94Class F sortase (Fragment) n=1 Tax=Chloroflexia ba... [more]
A0A7V8VWU1_9CHLR1.660e-3142.66Class F sortase n=1 Tax=Chloroflexia bacterium Tax... [more]
A0A6J4V8P7_9CHLR4.390e-3143.45Uncharacterized protein n=1 Tax=uncultured Thermom... [more]
A0A7W0TVH5_9CHLR7.020e-3142.76Class F sortase n=1 Tax=Chloroflexia bacterium Tax... [more]
A0A6J4VCX3_9CHLR1.150e-3045.31Uncharacterized protein (Fragment) n=1 Tax=uncultu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53470contigP-wetherbeei_contig53470:18..497 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121087.AUCK01000025_gene1839
PFAMsSortase
Model size480
Max annot lvl91061|Bacilli
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.03e-20
EggNOG OGsCOG3764@1|root,COG3764@2|Bacteria,1V79B@1239|Firmicutes,4HJ8C@91061|Bacilli,1ZHDM@1386|Bacillus
DescriptionSortase family
Cds size480
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186799.652194-CDS-P-wetherbeei_contig53470:17..4971683186799.652194-CDS-P-wetherbeei_contig53470:17..497Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53470 18..497 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53470.1.1prot_P-wetherbeei_contig53470.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53470 18..497 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53470.1.1

>prot_P-wetherbeei_contig53470.1.1 ID=prot_P-wetherbeei_contig53470.1.1|Name=mRNA_P-wetherbeei_contig53470.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp
SCARGQVPASIAIPAIQVQATFEVKEIVGGVLQEPTDENVVTWYKNSNRL
GETGNTVLAGHLNYWGVPEGVFFKLNALKQGDLITITGADGGTYTYAVTS
VRSVPIAEGPAASVAPTDRETLTLMTCGGEWDSTISEYDSRTVVTAVRVP
NPEAAQGGA*
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mRNA from alignment at P-wetherbeei_contig53470:18..497+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53470.1.1 ID=mRNA_P-wetherbeei_contig53470.1.1|Name=mRNA_P-wetherbeei_contig53470.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig53470:18..497+ (Phaeothamnion wetherbeei SAG_119_79)
TCCTGCGCCCGCGGCCAGGTCCCCGCCTCCATCGCGATCCCCGCGATCCA GGTGCAGGCCACCTTCGAGGTCAAGGAGATCGTGGGCGGCGTGCTCCAGG AGCCGACCGACGAGAACGTCGTCACCTGGTACAAGAATTCGAACCGGCTC GGCGAGACGGGCAACACCGTGCTGGCGGGGCACCTCAACTACTGGGGCGT GCCGGAGGGCGTCTTCTTCAAGCTGAACGCGCTGAAACAGGGCGATCTCA TCACCATCACCGGCGCCGATGGCGGCACCTACACCTACGCGGTGACCAGC GTGCGGTCCGTGCCGATTGCGGAGGGGCCGGCGGCCTCCGTCGCCCCGAC CGACCGCGAGACCCTCACCCTCATGACCTGCGGCGGTGAGTGGGACAGCA CCATCAGCGAGTACGACAGCAGGACCGTGGTGACGGCGGTGCGCGTGCCG AACCCGGAGGCCGCCCAGGGTGGCGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53470:18..497+

>mRNA_P-wetherbeei_contig53470.1.1 ID=mRNA_P-wetherbeei_contig53470.1.1|Name=mRNA_P-wetherbeei_contig53470.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig53470:18..497+ (Phaeothamnion wetherbeei SAG_119_79)
TCCTGCGCCCGCGGCCAGGTCCCCGCCTCCATCGCGATCCCCGCGATCCA
GGTGCAGGCCACCTTCGAGGTCAAGGAGATCGTGGGCGGCGTGCTCCAGG
AGCCGACCGACGAGAACGTCGTCACCTGGTACAAGAATTCGAACCGGCTC
GGCGAGACGGGCAACACCGTGCTGGCGGGGCACCTCAACTACTGGGGCGT
GCCGGAGGGCGTCTTCTTCAAGCTGAACGCGCTGAAACAGGGCGATCTCA
TCACCATCACCGGCGCCGATGGCGGCACCTACACCTACGCGGTGACCAGC
GTGCGGTCCGTGCCGATTGCGGAGGGGCCGGCGGCCTCCGTCGCCCCGAC
CGACCGCGAGACCCTCACCCTCATGACCTGCGGCGGTGAGTGGGACAGCA
CCATCAGCGAGTACGACAGCAGGACCGTGGTGACGGCGGTGCGCGTGCCG
AACCCGGAGGCCGCCCAGGGTGGCGCCTGA
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