mRNA_P-wetherbeei_contig5344.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A836CHX6_9STRA (RF-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX6_9STRA) HSP 1 Score: 110 bits (276), Expect = 4.360e-26 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 3
Query: 228 RFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARK 482
R +L E D+ E F+KGSGPGGQKINKVR+ VQL H PTGI V CQ+AR L +NR+IAR L +KVE HL+G +SRIGRR+ R +K
Sbjct: 36 RLKLNEADIRESFVKGSGPGGQKINKVRSCVQLTHLPTGIQVQCQDARDLISNRAIARKMLAEKVEFHLRGKDSRIGRRVSRVQK 120
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A6H5K1A9_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1A9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.390e-25 Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 3
Query: 231 FELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKKDRGRRRA 509
FEL +ED+EE+F GSGPGGQKINKVRN VQL H P+G++VSCQ++R L ANR IAR L++KVE L GA+S++GRRI R KK R +R++
Sbjct: 53 FELLDEDIEERF--GSGPGGQKINKVRNCVQLTHLPSGVSVSCQDSRELHANRHIARKRLKEKVEFQLMGADSKVGRRINNIRNKKARSQRKS 143
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A0G4IRH9_PLABS (RF_PROK_I domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRH9_PLABS) HSP 1 Score: 99.8 bits (247), Expect = 5.130e-22 Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 3
Query: 198 ARAASLSSSRRFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKKDRGRRRA 509
AR SL SS F+ E+DL+EKFI G G GGQKINK + VQLVH+PTG+ + CQE RSL NRSIAR L ++++ L G +SRI RR ER R++K + R R+
Sbjct: 17 ARPRSLFSSTLFD--EDDLDEKFIHGGGNGGQKINKTASCVQLVHKPTGLLIKCQETRSLQQNRSIARKRLAAQLDLQLNGDSSRIARRQERLRRRKSKHRSRS 118
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A7S2S280_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S280_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.850e-22 Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 3
Query: 174 PVESVLRNARAASLSSS-RRFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRI 467
PV L RA S + R L E DLEE F+KG+GPGGQKINKVRN VQL H PTG+ V+ Q+ RSLTANR+IAR L +KV++ + G S++G+++
Sbjct: 54 PVARALGQVRAVHRSHAVSRLTLSENDLEEAFVKGTGPGGQKINKVRNCVQLRHTPTGLTVAVQDGRSLTANRAIARKRLAEKVDLEMNGRESKLGKKV 152
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A317VKA1_9EURO (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Aspergillus heteromorphus CBS 117.55 TaxID=1448321 RepID=A0A317VKA1_9EURO) HSP 1 Score: 97.4 bits (241), Expect = 2.000e-21 Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 3
Query: 228 RFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKK 488
R ++E+ DL + ++KG+GPGGQKINK + VQL+H+PTG+ + CQ RS + N AR L DKVE HL G SR ++ERARKKK
Sbjct: 19 RLKIEDADLIKSYLKGTGPGGQKINKTNSAVQLIHKPTGVVIKCQATRSRSQNEKTARQLLADKVEQHLHGDQSRAAIKVERARKKK 105
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A8K0JDT0_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JDT0_9TREE) HSP 1 Score: 98.6 bits (244), Expect = 6.420e-21 Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 3
Query: 135 SRTLMTRKSSLPTPVESVLRNARAASLSSSRRFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKK 488
+ T++ + + LP+ ++ + + L++ + +L EE+LEE+F++GSGPGGQ INK N V L+H PTGI + CQE RSL NR +AR LRDKVE HL NS+ + E+ R++K
Sbjct: 60 NHTIVPKPNKLPSSIKKLNKQ-----LATRQSPDLPEEELEERFVRGSGPGGQSINKTSNAVSLIHIPTGIRIQCQETRSLQHNRRLARQILRDKVEQHLSPGNSKQDIKWEKERRRK 172
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A8H5BXJ9_9AGAR (Mitochondrial zinc maintenance protein 1, mitochondrial n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BXJ9_9AGAR) HSP 1 Score: 99.4 bits (246), Expect = 1.370e-20 Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 162 SLPTPVESVLRNARAASLSSSRRF--ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHL 434
S PTP ++ RN A S R EL EEDLEE FI+GSGPGGQ INK N VQLVH+PTG+ V+CQ+ RSL NR +AR WL +K V++
Sbjct: 143 SSPTPAGALPRNFSALRRVSKERVLPELREEDLEESFIRGSGPGGQSINKTENNVQLVHKPTGLRVACQDTRSLAQNRKLARRWLLEKACVYV 235
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A1Y2FUL4_PROLT (RF-1 domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FUL4_PROLT) HSP 1 Score: 96.3 bits (238), Expect = 1.610e-20 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 3
Query: 234 ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKK 488
E+ E+D+EEKF++G+GPGGQKINK QL H P+GI VSCQE RSL NRSIAR LR+KV+ H+ G SR+ ++ + +KK
Sbjct: 63 EISEDDIEEKFVRGTGPGGQKINKTSIVAQLKHLPSGIQVSCQETRSLQQNRSIARKRLREKVDAHINGDESRVMAKVRESVRKK 147
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A165HEW2_9APHY (Mitochondrial zinc maintenance protein 1, mitochondrial n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165HEW2_9APHY) HSP 1 Score: 97.4 bits (241), Expect = 1.930e-20 Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 3
Query: 234 ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHL 434
EL+EEDLEE F++GSGPGGQ INK N VQL+H+PTGI V+CQE RSL NR++AR WL DK + L
Sbjct: 155 ELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVACQETRSLNQNRALARKWLLDKARLFL 221
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A0L0DGI0_THETB (Peptide release factor n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DGI0_THETB) HSP 1 Score: 94.7 bits (234), Expect = 2.140e-20 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 3
Query: 228 RFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIER 473
R ++ E++LEE F+ GSGPGGQKINK ++RV+LVH PTG+ V Q+ RS ANR+IAR L DKVE L+G SR+GR+ +R
Sbjct: 12 RHKVAEDELEETFLHGSGPGGQKINKTQSRVRLVHAPTGLTVVVQDTRSREANRTIARKRLADKVEAQLKGNASRLGRKAQR 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5344.1.2 >prot_P-wetherbeei_contig5344.1.2 ID=prot_P-wetherbeei_contig5344.1.2|Name=mRNA_P-wetherbeei_contig5344.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp MLRCAYRNAWQECSLAVSRTLMTRKSSLPTPVESVLRNARAASLSSSRRFback to top mRNA from alignment at P-wetherbeei_contig5344:11..1725- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5344.1.2 ID=mRNA_P-wetherbeei_contig5344.1.2|Name=mRNA_P-wetherbeei_contig5344.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1715bp|location=Sequence derived from alignment at P-wetherbeei_contig5344:11..1725- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5344:11..1725- >mRNA_P-wetherbeei_contig5344.1.2 ID=mRNA_P-wetherbeei_contig5344.1.2|Name=mRNA_P-wetherbeei_contig5344.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig5344:11..1725- (Phaeothamnion wetherbeei SAG_119_79)back to top |