mRNA_P-wetherbeei_contig5343.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5343.1.1
Unique NamemRNA_P-wetherbeei_contig5343.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A6H5KYQ1_9PHAE (Tim44 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYQ1_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 1.340e-109
Identity = 233/528 (44.13%), Postives = 301/528 (57.01%), Query Frame = 1
Query:    1 SSGGGKEGGDKSVFESLRGAVNEAIDKNKYLKEQLEKLKDAEGKFGAVAAERLRQAQVGQDGRAFLLSVLLAVFTLFSFVFRAPLNKRCSCLLPSRVPLLSVRAVQEQAEKLKGKASEQAGKAGGAFQAVRGSLRERFGS-GGDAGXXXXXXXXXXXXXXXXXXXXXXRPAAADENEFVRASKERQQQLRDSWREKLLAAPWVAQALESTQGFRDGFVETAYDLFGAKPSR-RSTVVKRLREPKPLPKKKAAGDGAAEGGAATAEAVADDVETDAKSGVGGAEDDREMGGALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQAGKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            SSG GK G ++ +F+ L+  + E I+KN  LKE L KLKDAE K                                          K         V         +QAEK + KA +  G     FQ ++ +L E+ G  GG++G    XXXXXXX                 ENEFVRASKE+    + +  E  L +    +    TQ FR+     + +LF ++  +  S VVK+L++PK                               K G+G          +L+IVK+ GEAWE+LQ RL+E+PIIQD+LGA RV+    +G+  K A+D V  ++ED QEAWETSQHPLVYK SS WDS+TAE++ G  +RELRRLD SF +E+WKRD+QE  LPE M AFLRGD+  L++W GEA YNKL++EA QRK DG+++DPHVLDIRQ +VLAIKADA   NPTI LQFMCQQI+CVRN+ GEIVEG+EDDIRA YYI AFQR+F + + ELRW+VVD M+V
Sbjct:  112 SSGKGKGGDEEGMFDRLKKTLTEEIEKNPSLKESLSKLKDAEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAKSKQGEFV---------KQAEKAREKAQQGGGVFQEKFQELKQTLEEKLGKVGGESGDGKDXXXXXXXA----------------ENEFVRASKEKFSGAQKALDENSLFSKLTVK----TQAFREAVAGASSELFPSEGQKAESAVVKKLKQPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KRGMG----------SLMIVKTAGEAWERLQERLKESPIIQDLLGASRVVASGSLGRGAKAAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLRGDVKLLKQWTGEACYNKLASEARQRKADGMVLDPHVLDIRQGEVLAIKADAGKANPTIALQFMCQQINCVRNKKGEIVEGAEDDIRATYYILAFQREFNDDEAELRWRVVDMMVV 599          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A836CIX3_9STRA (Tim44-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX3_9STRA)

HSP 1 Score: 272 bits (695), Expect = 6.350e-85
Identity = 137/238 (57.56%), Postives = 179/238 (75.21%), Query Frame = 1
Query:  868 LLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTP-VGQAGKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADAD-SRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFML 1575
            +++VK+  E WEKLQARLR++ +IQDIL     +G+T    +  +RAR+ V+ R+EDA+E WETSQHPLVY+ASSVWDS+TAETE G+A R LRRLD  FD+EEWK D+ + LLPEVMGA+LRGD  +LR+W+  AV +KL AE   RKK   ++DPHVLDIR ADV+A K + + + NP +++ FM QQI CVRN  GE+V GSED I A +YIFA +R++ E  +ELRW+V DFML
Sbjct:    1 MVLVKTAAEVWEKLQARLRQSQLIQDILAGTEAVGKTTGADKVVRRAREKVSDRVEDAKETWETSQHPLVYQASSVWDSMTAETEAGAAQRLLRRLDPYFDVEEWKADLVQHLLPEVMGAWLRGDADTLRQWLSGAVLSKLLAEVEARKKADRIMDPHVLDIRNADVIAYKIEGEHAANPVLLVLFMVQQIDCVRNSKGEVVAGSEDRIAACHYIFAMRREYEEANQELRWRVADFML 238          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A7S3XJ89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJ89_HETAK)

HSP 1 Score: 258 bits (659), Expect = 1.940e-78
Identity = 128/243 (52.67%), Postives = 172/243 (70.78%), Query Frame = 1
Query:  862 GALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQAGKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADS-RNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLVRLF 1587
            G L+ VK    AWEK+  RLR +P+IQ +L  G+++GR+PVG+A  +A  AV  ++EDA+EAWETSQ+PLVYK S  +D +TA+TE   A+RE RRLD  +D  EWK DV E+ LP  + AFLRGD  +L++W GE VY KL  E  +RK DG+++D  VL +   +++AIKAD  + + P +VLQ M QQ++CVRNR GE+VEG+ED IRANYY+ AFQR++ E+  EL W V D MLV  F
Sbjct:   79 GQLVAVKEEPTAWEKMGERLRHSPLIQQLLRTGKLVGRSPVGRAAGKAAGAVGDKLEDAREAWETSQNPLVYKLSGWYDDLTADTEEALAVREFRRLDPGWDPNEWKADVVEDFLPGFLRAFLRGDARALKDWCGEGVYGKLKQEIRKRKADGLVLDTQVLGLENDEIVAIKADEGAGQPPMVVLQVMAQQVNCVRNREGEVVEGAEDQIRANYYMIAFQREYREETGELVWSVADMMLVGAF 321          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A7S2XX10_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX10_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.810e-72
Identity = 115/218 (52.75%), Postives = 159/218 (72.94%), Query Frame = 1
Query:  937 IQDILGAGRVLGRTPVGQAGKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKAD-ADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLVRLF 1587
            I+ ILGAG+ +G++ VGQA  + +     R+ED +E WETSQ P++YK S+ WD V++ETE+G A+RELRRLD +F I++WK+DV E +L   + AFLRGD  +L ++ GEAVYN+L+ E  QRK DG ++DPHV++I   ++LA++ D +    PTI++QFM QQ++CVRNR GEIVEG ED IRANYY+ AFQR + E    LRW + DF+LV  F
Sbjct:    1 IKGILGAGKAIGKSAVGQAAGKVKTTFNDRLEDVREMWETSQSPIIYKLSAAWDMVSSETEVGIAVRELRRLDPNFSIDDWKQDVVENMLRPFLEAFLRGDGRALNQYCGEAVYNRLNQEIRQRKADGQVLDPHVMEIENDELLAVQLDDSGGGTPTILIQFMAQQVNCVRNREGEIVEGGEDQIRANYYVLAFQRHYDEDTAVLRWVIADFLLVGAF 218          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A067D249_SAPPC (Tim44 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D249_SAPPC)

HSP 1 Score: 239 bits (610), Expect = 4.030e-70
Identity = 114/242 (47.11%), Postives = 171/242 (70.66%), Query Frame = 1
Query:  865 ALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQA----GKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            A+++VK    AW+++ ARL+E PIIQ +L A R+  +T  GQ      K A+D +    ED +E WETSQ+P VY+ SS++D +  ET    A+RE+RR D SF++EEWK +V E ++P V+ AFL+G+   L++WMGEA Y+ ++    +RK DG+++DP+VL IR   V+A+ A+ D + P I LQ M QQIHC+RNR GEI+EG+ED+I+AN+Y+FAF+R++ E +  LRWK+V+F ++
Sbjct:  160 AMVLVKGEQTAWDRIGARLKETPIIQGLLEAARLAAKTKAGQTVGSGAKVAKDKIGDATEDVREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDNVAESVVPFVLDAFLKGNSRDLKKWMGEAAYSTVNMAIRERKTDGLVVDPNVLAIRDVTVIALSAE-DKQAPVIGLQLMAQQIHCIRNREGEIIEGAEDEIKANFYVFAFRREYDEDEMALRWKIVEFGVI 400          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A1V9Y814_9STRA (Mitochondrial Protein Translocase (MPT) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y814_9STRA)

HSP 1 Score: 239 bits (611), Expect = 4.460e-70
Identity = 132/330 (40.00%), Postives = 201/330 (60.91%), Query Frame = 1
Query:  607 AQALESTQGFRDGFVETAYDLFGA--KPSRRSTVVKRLREPKPLPKKKAAGDGAAEGGAATAEAVADDVETDAKSGVGGAEDDREMGGALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQ----AGKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            ++ L  T G ++  VET Y++FG   K S   T+   L E K                A       +D E +  SG            A+++VK    AW+++ ARL+E PIIQ +L A R+   T  GQ    + K A+D +    EDA+E WETSQ+P VY+ SS++D +  ET    A+RE+RR D SF++EEWK  V + ++P V+ AFL+G+   L++WMGEA YN ++    +RK DG+++DP+VL IR   V+A+ A+ D + P I +Q M QQI+C+RNR GEI+EG+ED+I+AN+Y+FAF+R++ E++  LRWK+++F ++
Sbjct:  114 SKVLGDTSGAKETLVETFYEVFGMGKKKSVEETLTSSLSEKK----------------ATKPVENTEDEEAEPYSGTT----------AVVVVKGEQSAWDRIGARLKETPIIQGLLEAARLAAETKAGQTLGSSAKVAKDKLGDTAEDAREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDQVADTVVPFVLDAFLKGNSRDLKKWMGEAAYNTVNMSIRERKADGLVVDPNVLAIRDVTVIALSAE-DKQAPIIGIQLMAQQINCIRNREGEIIEGAEDEIKANFYVFAFRREYDEEEMALRWKIIEFGVI 416          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A3R6VZC7_9STRA (Tim44 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VZC7_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.470e-69
Identity = 114/242 (47.11%), Postives = 168/242 (69.42%), Query Frame = 1
Query:  865 ALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQA----GKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            A+++VK    AWE++ +RLRE PIIQ +L A     +T  G+      K+ARD V    ED +E WETSQ+P VY+ SS++D +  ET    A++E+RR D SFD+E WK  V E ++P V+ AFLRG+   L++WMGEA YN ++    +RK DG+++DP++L IR   V+A+ A+ D + P I +Q M QQI+C+RNR GEIVEG+EDDI+AN+YIFAF+R++ E+   L+WK+++F ++
Sbjct:  170 AMVVVKGEQTAWERVASRLRETPIIQGLLDAANQAAKTEAGKVLGSTAKKARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETAESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNTVNMAIRERKSDGLVVDPNILAIRNVTVIALSAE-DKQAPIIGIQLMAQQINCIRNREGEIVEGAEDDIQANFYIFAFRREYDEEASALKWKIIEFGVI 410          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: W4HCW6_9STRA (Tim44 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCW6_9STRA)

HSP 1 Score: 237 bits (604), Expect = 4.190e-69
Identity = 114/242 (47.11%), Postives = 168/242 (69.42%), Query Frame = 1
Query:  865 ALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQA----GKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            A+++VK    AWE++ +RLRE PIIQ +L A     +T  G+      K+ARD V    ED +E WETSQ+P VY+ SS++D +  ET    A++E+RR D SFD+E WK  V E ++P V+ AFLRG+   L++WMGEA YN ++    +RK DG+++DP++L IR   V+A+ A+ D + P I +Q M QQI+C+RNR GEIVEG++DDI+AN+YIFAF+R++ E+   L+WK+V+F ++
Sbjct:  171 AMVVVKGEQTAWERVASRLRETPIIQGLLDAANQAAKTEAGKVLGSTAKKARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETPESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNTVNMAIRERKADGLVVDPNILAIRNVTVIALSAE-DKQAPIIGIQLMAQQINCIRNREGEIVEGADDDIQANFYIFAFRREYDEEASALKWKIVEFGVI 411          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A6G0XF96_9STRA (Tim44 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XF96_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.990e-69
Identity = 129/326 (39.57%), Postives = 194/326 (59.51%), Query Frame = 1
Query:  619 ESTQGFRDGFVETAYDLFGA--KPSRRSTVVKRLREPKPLPKKKAAGDGAAEGGAATAEAVADDVETDAKSGVGGAEDDREMGGALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQA----GKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            +  QGF++  V+T Y++FG   K S   T+   L + +                    E   +D E    +G            A+++VK     WE++ ARLRE PIIQ +L A     +T  G+      K+ARD V    ED +E WETSQ+P VY+ SS++D +  ET    A++E+RR D SFD+E WK  V E ++P V+ AFLRG+   L++WMGEA YN ++    +RK +G+++DP++L IR   V+A+ A+ D + P I +Q M QQI+C+RNR GEIVEG+EDDI+AN+YIFAF+R++ E+   L+WK+++F ++
Sbjct:  108 DDPQGFKETLVDTFYEVFGMNKKKSIEETLTSSLADKR-----------------TKTETPKEDEEAAPYTGTT----------AMVVVKGEQTPWERVAARLRETPIIQGLLDAANKAAKTEAGKVLGSTAKKARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETPESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNTVNMAIRERKSEGLVVDPNILAIRNVTVIALSAE-DKQAPIIGIQLMAQQINCIRNREGEIVEGAEDDIQANFYIFAFRREYDEEAAALKWKIIEFGVI 405          
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Match: A0A485KT73_9STRA (Aste57867_11326 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KT73_9STRA)

HSP 1 Score: 237 bits (605), Expect = 5.540e-69
Identity = 131/325 (40.31%), Postives = 195/325 (60.00%), Query Frame = 1
Query:  622 STQGFRDGFVETAYDLFGA--KPSRRSTVVKRLREPKPLPKKKAAGDGAAEGGAATAEAVADDVETDAKSGVGGAEDDREMGGALLIVKSFGEAWEKLQARLREAPIIQDILGAGRVLGRTPVGQA----GKRARDAVAGRIEDAQEAWETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEELLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDIRQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANYYIFAFQRDFLEQQRELRWKVVDFMLV 1578
            +T+G ++  VET Y++FG   K S   T+   L +      KK   +G  E  A T                           A+++VK    AWE++ ARL+E PIIQ +L A +   +T  GQ      K ARD V    ED +E WETSQ+P VY+ SS++D +  ET    A++E+RR D SFD+E WK  V E ++P V+ AFLRG+   L++WMGEA YN+++     RK +G+++DP++L IR   V+A+ A+ D + P I +Q M QQI+C+RNR GEI+EG+EDDI+AN+YIFAF+R++ E+   L+WK+++F ++
Sbjct:  138 NTEGVKETLVETFYEVFGMNKKKSIEETLTSSLADKS---SKKVETEGGEEAAAYTGTT------------------------AMVLVKGEQTAWERVAARLKETPIIQGLLDAAQQAAKTKAGQTLGATAKTARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETAESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNQVNFAIRDRKSEGLVVDPNILAIRNVTVIALSAE-DKQAPIIGIQLMAQQINCIRNREGEIIEGAEDDIQANFYIFAFRREYDEEAAALKWKIIEFGVI 434          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5343.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYQ1_9PHAE1.340e-10944.13Tim44 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIX3_9STRA6.350e-8557.56Tim44-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S3XJ89_HETAK1.940e-7852.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XX10_9STRA2.810e-7252.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A067D249_SAPPC4.030e-7047.11Tim44 domain-containing protein n=4 Tax=Saprolegni... [more]
A0A1V9Y814_9STRA4.460e-7040.00Mitochondrial Protein Translocase (MPT) Family n=1... [more]
A0A3R6VZC7_9STRA1.470e-6947.11Tim44 domain-containing protein n=2 Tax=Aphanomyce... [more]
W4HCW6_9STRA4.190e-6947.11Tim44 domain-containing protein n=4 Tax=Aphanomyce... [more]
A0A6G0XF96_9STRA4.990e-6939.57Tim44 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A485KT73_9STRA5.540e-6940.31Aste57867_11326 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5343contigP-wetherbeei_contig5343:1349..3682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G7Z7
PFAMsB3,Rad51,Tim44
Model size1587
Max annot lvl2759|Eukaryota
KEGG koko:K17804
KEGG TC3.A.8.1
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0080167,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons3
Evalue7.27e-108
EggNOG OGsKOG2580@1|root,KOG2580@2759|Eukaryota
Ec32 ortholog descriptionImport inner membrane translocase subunit TIM44, mitochondrial precursor
Ec32 orthologEc-06_009580.1
Descriptionprotein import into mitochondrial matrix
Cds size1587
COG categoryU
BRITEko00000,ko02000,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186799.1113687-CDS-P-wetherbeei_contig5343:1348..15791683186799.1113687-CDS-P-wetherbeei_contig5343:1348..1579Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5343 1349..1579 -
1683186799.12606-CDS-P-wetherbeei_contig5343:1816..19391683186799.12606-CDS-P-wetherbeei_contig5343:1816..1939Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5343 1817..1939 -
1683186799.1339898-CDS-P-wetherbeei_contig5343:2449..36821683186799.1339898-CDS-P-wetherbeei_contig5343:2449..3682Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5343 2450..3682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5343.1.1prot_P-wetherbeei_contig5343.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5343 1349..3682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5343.1.1

>prot_P-wetherbeei_contig5343.1.1 ID=prot_P-wetherbeei_contig5343.1.1|Name=mRNA_P-wetherbeei_contig5343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=529bp
SSGGGKEGGDKSVFESLRGAVNEAIDKNKYLKEQLEKLKDAEGKFGAVAA
ERLRQAQVGQDGRAFLLSVLLAVFTLFSFVFRAPLNKRCSCLLPSRVPLL
SVRAVQEQAEKLKGKASEQAGKAGGAFQAVRGSLRERFGSGGDAGGSSNA
SSGGGSSSNDGGVAGAARPAAADENEFVRASKERQQQLRDSWREKLLAAP
WVAQALESTQGFRDGFVETAYDLFGAKPSRRSTVVKRLREPKPLPKKKAA
GDGAAEGGAATAEAVADDVETDAKSGVGGAEDDREMGGALLIVKSFGEAW
EKLQARLREAPIIQDILGAGRVLGRTPVGQAGKRARDAVAGRIEDAQEAW
ETSQHPLVYKASSVWDSVTAETEMGSALRELRRLDRSFDIEEWKRDVQEE
LLPEVMGAFLRGDIASLREWMGEAVYNKLSAEAAQRKKDGILIDPHVLDI
RQADVLAIKADADSRNPTIVLQFMCQQIHCVRNRAGEIVEGSEDDIRANY
YIFAFQRDFLEQQRELRWKVVDFMLVRLF
back to top

mRNA from alignment at P-wetherbeei_contig5343:1349..3682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5343.1.1 ID=mRNA_P-wetherbeei_contig5343.1.1|Name=mRNA_P-wetherbeei_contig5343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2334bp|location=Sequence derived from alignment at P-wetherbeei_contig5343:1349..3682- (Phaeothamnion wetherbeei SAG_119_79)
TCTTCTGGAGGCGGAAAGGAAGGCGGCGACAAGAGCGTTTTTGAAAGCTT GCGCGGCGCCGTCAACGAGGCGATCGATAAGAACAAATATTTGAAGGAGC AGCTGGAGAAGTTAAAGGACGCCGAGGGAAAATTTGGCGCGGTTGCGGCC GAAAGATTGCGGCAAGCACAGGTCGGTCAAGATGGGAGGGCCTTCTTGCT TTCCGTATTACTCGCTGTATTTACTTTGTTCTCTTTCGTTTTTAGAGCCC CTTTGAACAAGCGTTGTAGTTGTTTACTGCCATCTCGTGTCCCGCTTCTT TCCGTGCGTGCGGTACAGGAGCAAGCCGAAAAGTTGAAGGGCAAGGCCTC GGAGCAAGCGGGCAAGGCCGGCGGTGCCTTTCAGGCGGTGCGCGGCTCTC TGCGGGAACGCTTTGGCAGCGGCGGTGACGCCGGTGGGAGCAGCAATGCC AGCAGCGGTGGCGGCAGCAGCAGCAACGATGGCGGCGTTGCAGGCGCCGC CAGGCCCGCGGCGGCCGACGAGAACGAGTTTGTCCGTGCCAGTAAGGAGC GGCAGCAGCAGCTGCGGGACAGCTGGCGGGAAAAGCTTCTGGCGGCGCCA TGGGTGGCGCAGGCGCTGGAGAGCACACAGGGCTTCCGGGATGGATTCGT GGAGACGGCCTACGACCTTTTCGGCGCCAAGCCAAGCCGCCGCAGCACCG TCGTCAAAAGGCTGCGCGAGCCGAAACCGCTGCCGAAGAAGAAAGCCGCC GGTGACGGAGCGGCAGAAGGCGGAGCCGCTACGGCGGAGGCGGTGGCAGA CGACGTGGAGACCGACGCGAAGAGCGGCGTCGGCGGCGCGGAGGACGACC GGGAGATGGGCGGCGCGCTGCTGATCGTCAAAAGCTTCGGCGAGGCTTGG GAGAAGCTGCAGGCGCGGCTCCGGGAGGCGCCCATCATCCAGGACATTCT GGGCGCCGGCCGCGTCTTGGGGCGGACCCCCGTCGGGCAAGCCGGCAAGC GGGCGCGCGACGCCGTCGCCGGACGTATCGAGGACGCGCAGGAGGCGTGG GAGACGTCGCAACACCCGCTCGTGTACAAGGCATCAAGCGTGTGGGATTC GGTGACGGCCGAGACGGAGATGGGTAGCGCGCTGCGCGAGCTGCGGCGGC TGGACCGTTCCTTCGACATCGAGGAGTGGAAGCGCGACGTGCAGGAGGAG CTGCTGCCCGAGGTCATGGGCGCCTTCCTCCGGGTCAGTTGGGCAGAAAG CATCTCTTTTCACGTTTTCAAGTTTTCTGTGTTTGCTTCGTTACTTCATG GTATTGGTTTTCAAATTTTCTAGTTTTTTTGTTTGCTGGCGTTCTGGTTG GTGCCTCTAAGTCGGTTGGGTGTTTTCTTGCGCCTCGGCATCGGTTTTGG AAGCAGATGGTTTGCCAGAGGCCGCCATGGCGGCGTTACTGCTACAAACT ATGTCTTGCGGGCTTCGTTCGTCGCAGCATGACTGAAAAATGTTTATGAT TTTTATCTTAGGTATCCTTCTCTGCAAACGCTCACTGCTCTCCAGTGCCG TTTGCTGATGGCTCTTCTCCTTGCGCTCTTTTTCCTGCTGCCTTGCCGCT TTGCCGCGCTGTGCCTTTCTCTCCGTCGATATGTTTTGGCCGCTCCCTCT CTTTTCACTTTGCCTCTTGCCCGGCCATCCGTCCTGCTGGTCCATCCATC GGCCGCTCCATAAAACCCCATCCGTCCGCTCCTTTGAAAACAGGGCGACA TTGCGTCGCTGCGCGAATGGATGGGCGAGGCCGTCTACAACAAGCTGTCG GCCGAGGCGGCGCAGCGCAAGAAGGACGGCATTCTCATTGACCCACATGT GCTCGACATCCGGCAGGTGCGATATGGCGCCCGCGTCGCTTGCCGCGCGC AGGAACGGTTTCGCTGTAACGACCGATACGTCGCTTTTCTGACTCTTGAA ATTTCTTGCTGCTATACTTTTGTAAAGCAAGAAGTGCGGATTTACCAGCA GGCCCTGAACTTTTCTTCCATCATACTTCAAAATTATACGCGCACGCGGC CAACCCTCTTGCCTGTTTGACTATTTATTGCCTGCTCGACATGCGGACGG AAGGCGGACGTGCTGGCCATCAAGGCAGATGCCGACAGCCGCAACCCGAC GATCGTCCTGCAGTTCATGTGCCAGCAGATCCACTGCGTGCGGAACCGCG CCGGAGAGATCGTGGAAGGTTCCGAGGATGACATCCGGGCCAACTACTAC ATCTTCGCCTTCCAGCGGGACTTTTTGGAGCAGCAGCGTGAGCTGCGCTG GAAGGTCGTCGACTTTATGCTGGTGCGTCTCTTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5343:1349..3682-

>mRNA_P-wetherbeei_contig5343.1.1 ID=mRNA_P-wetherbeei_contig5343.1.1|Name=mRNA_P-wetherbeei_contig5343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1587bp|location=Sequence derived from alignment at P-wetherbeei_contig5343:1349..3682- (Phaeothamnion wetherbeei SAG_119_79)
TCTTCTGGAGGCGGAAAGGAAGGCGGCGACAAGAGCGTTTTTGAAAGCTT
GCGCGGCGCCGTCAACGAGGCGATCGATAAGAACAAATATTTGAAGGAGC
AGCTGGAGAAGTTAAAGGACGCCGAGGGAAAATTTGGCGCGGTTGCGGCC
GAAAGATTGCGGCAAGCACAGGTCGGTCAAGATGGGAGGGCCTTCTTGCT
TTCCGTATTACTCGCTGTATTTACTTTGTTCTCTTTCGTTTTTAGAGCCC
CTTTGAACAAGCGTTGTAGTTGTTTACTGCCATCTCGTGTCCCGCTTCTT
TCCGTGCGTGCGGTACAGGAGCAAGCCGAAAAGTTGAAGGGCAAGGCCTC
GGAGCAAGCGGGCAAGGCCGGCGGTGCCTTTCAGGCGGTGCGCGGCTCTC
TGCGGGAACGCTTTGGCAGCGGCGGTGACGCCGGTGGGAGCAGCAATGCC
AGCAGCGGTGGCGGCAGCAGCAGCAACGATGGCGGCGTTGCAGGCGCCGC
CAGGCCCGCGGCGGCCGACGAGAACGAGTTTGTCCGTGCCAGTAAGGAGC
GGCAGCAGCAGCTGCGGGACAGCTGGCGGGAAAAGCTTCTGGCGGCGCCA
TGGGTGGCGCAGGCGCTGGAGAGCACACAGGGCTTCCGGGATGGATTCGT
GGAGACGGCCTACGACCTTTTCGGCGCCAAGCCAAGCCGCCGCAGCACCG
TCGTCAAAAGGCTGCGCGAGCCGAAACCGCTGCCGAAGAAGAAAGCCGCC
GGTGACGGAGCGGCAGAAGGCGGAGCCGCTACGGCGGAGGCGGTGGCAGA
CGACGTGGAGACCGACGCGAAGAGCGGCGTCGGCGGCGCGGAGGACGACC
GGGAGATGGGCGGCGCGCTGCTGATCGTCAAAAGCTTCGGCGAGGCTTGG
GAGAAGCTGCAGGCGCGGCTCCGGGAGGCGCCCATCATCCAGGACATTCT
GGGCGCCGGCCGCGTCTTGGGGCGGACCCCCGTCGGGCAAGCCGGCAAGC
GGGCGCGCGACGCCGTCGCCGGACGTATCGAGGACGCGCAGGAGGCGTGG
GAGACGTCGCAACACCCGCTCGTGTACAAGGCATCAAGCGTGTGGGATTC
GGTGACGGCCGAGACGGAGATGGGTAGCGCGCTGCGCGAGCTGCGGCGGC
TGGACCGTTCCTTCGACATCGAGGAGTGGAAGCGCGACGTGCAGGAGGAG
CTGCTGCCCGAGGTCATGGGCGCCTTCCTCCGGGGCGACATTGCGTCGCT
GCGCGAATGGATGGGCGAGGCCGTCTACAACAAGCTGTCGGCCGAGGCGG
CGCAGCGCAAGAAGGACGGCATTCTCATTGACCCACATGTGCTCGACATC
CGGCAGGCGGACGTGCTGGCCATCAAGGCAGATGCCGACAGCCGCAACCC
GACGATCGTCCTGCAGTTCATGTGCCAGCAGATCCACTGCGTGCGGAACC
GCGCCGGAGAGATCGTGGAAGGTTCCGAGGATGACATCCGGGCCAACTAC
TACATCTTCGCCTTCCAGCGGGACTTTTTGGAGCAGCAGCGTGAGCTGCG
CTGGAAGGTCGTCGACTTTATGCTGGTGCGTCTCTTC
back to top