mRNA_P-wetherbeei_contig5341.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5341.3.1
Unique NamemRNA_P-wetherbeei_contig5341.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A353LQ47_9PROT (Pyrrolo-quinoline quinone n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQ47_9PROT)

HSP 1 Score: 604 bits (1558), Expect = 4.640e-213
Identity = 324/455 (71.21%), Postives = 386/455 (84.84%), Query Frame = 1
Query:   16 LALVSAIS--LSGCGLFKASGGPKLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPF-VSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            LA+VS ++  L GC +FK + GPKL+GERISVLALD+ LESDPRIG+++VM+P+PYVN DWPQPGGYADHAMHHLAL +     W    GKGA ++T ILAEPIIADG+VFVLDAQ G+SAL    G ++WR    PTGETDF FS+WPP LPF  SG  E   A+FGGG+AF +GR+F+ SGYGF+AA +A TG+E+WR  V VPIRSAPTVNGGRVFA T DNQLY L+A+DG +LW +Q LVESAG+LGSA+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTL ++  +T ISELNDIAGRPVIDRGRVFAISHSGN+VSIDLRTGER+WTRNIAGVQTPW+AGDFIY+LTL+ E+ A+SRRDGRVRWV QLRR+KDQED+EGR+EWSGPVLAGDRLIAVS++G +I++SPY G+VL YI +P G++VPPVVA+ +LY+LT  ++LL YR
Sbjct:   21 LAIVSLLAGGLGGCDIFKPAKGPKLEGERISVLALDKSLESDPRIGDLQVMLPRPYVNRDWPQPGGYADHAMHHLALPQQLAPAWQQKAGKGADADTEILAEPIIADGRVFVLDAQGGVSALAAADGRKLWRAEPRPTGETDFDFSVWPPHLPFFASGQVENPHAAFGGGVAFADGRLFLGSGYGFIAAFNAETGQELWRTEVEVPIRSAPTVNGGRVFAITHDNQLYVLAADDGRILWTHQGLVESAGVLGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLTRAGRVTAISELNDIAGRPVIDRGRVFAISHSGNLVSIDLRTGERVWTRNIAGVQTPWVAGDFIYVLTLDAEVAAVSRRDGRVRWVRQLRRYKDQEDREGRLEWSGPVLAGDRLIAVSNLGHVIAISPYDGEVLGYIKIPAGTYVPPVVADRSLYLLTKGSELLVYR 475          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A2N3E9K9_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E9K9_9PROT)

HSP 1 Score: 432 bits (1110), Expect = 2.150e-145
Identity = 220/458 (48.03%), Postives = 297/458 (64.85%), Query Frame = 1
Query:   16 LALVS-AISLS-GCG----LFKASGGPKLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            LAL+  A+S + GC     LF +S    L G+R+SV+ L  +LE+D  I +  +++P+ Y N  WPQPGG  D+AM+HLA     K++WS   G G+GS  +++A P+IADGK+FVLDA+  + A D+  G ++W T L P GE                      D   GGG+AFD GR+FV +G+GF  ALD  +GK IW + V  P R+APT NGGRVFA T DNQ    + E G VLW ++ +VESAGIL S S                             +D+L ++ ++T +SELNDIAGRPVIDR RVFAISHSG +VSIDLRTGER+WTR+I G+QTPW+AGDF++L+T   E+ A+SRRDGR+RW+ +L R++D +D++G +EWSGPVL  DRL+ VSS G  +SVSPYTG++L  I +PD + + P+VA ETLYILT DA+L+A +
Sbjct:   19 LALIGLALSATAGCSSVTDLFTSSDKTVLPGKRLSVMELGAELEADAAIADDTIILPQSYTNDAWPQPGGTPDNAMYHLAAPGPLKRIWSASAGAGSGSVAQLIASPVIADGKIFVLDAEVTVHAFDQTTGKKLWETELVPEGED--------------------GDEGRGGGVAFDNGRLFVVTGFGFGYALDPASGKAIWTQKVGDPFRAAPTANGGRVFAITSDNQTICFAQETGEVLWRHRGIVESAGILSSTSPAVAGAIAIAPYSSGELVALRVENGTPVWSDSLTRTGNVTSLSELNDIAGRPVIDRDRVFAISHSGRMVSIDLRTGERVWTRDIGGIQTPWVAGDFVFLVTNSQEVLAISRRDGRIRWIARLPRYEDPDDKDGPIEWSGPVLVSDRLVLVSSTGDAVSVSPYTGEILGRIDLPDSTLIAPIVARETLYILTDDAELIALK 456          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A2E5BS34_9HYPH (Pyrrolo-quinoline quinone n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BS34_9HYPH)

HSP 1 Score: 429 bits (1103), Expect = 1.650e-144
Identity = 239/457 (52.30%), Postives = 324/457 (70.90%), Query Frame = 1
Query:   13 VLALVSAISLSGCGL----FKASGGPKLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            ++ L + ++LSGC       K +   +L GERIS++AL++ LE+DPR+  +EV++P+PYVN DWPQPGGYAD+AMHHL  + +  + W  D G G+G +T +   P++A+G+V+VLDA++ I A D   G R+W   L P  E+                    +D   GGG A++ GR+FVT+G+G V AL+A +G+  WR PV  P R+APTVNG                         ++ +VESAGIL + SXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+D+L ++ ++T ++ELNDIAGRPVIDRGRV+A+SHSG  VSID+RTGER+WTRNIAGVQTPW+AG FI+L+T + E+ ALS+RDGR+RW+ QL RF+D+ED++G + WSGPVLAGDRLI  SS+G+ +S+SPYTG+VL  + +PDG ++PP+VANETLY+LT  A L+A +
Sbjct:    8 LVGLATLVTLSGCDTVSDWIKPASAERLPGERISIMALERTLEADPRLASLEVVLPRPYVNEDWPQPGGYADNAMHHLQASGSLTRQWRADAGTGSGGSTELATAPVMAEGRVYVLDAETTIGAFDAATGKRVWEVELTPDNES--------------------SDEGRGGGAAYEAGRVFVTTGFGEVVALNAASGEVYWRTPVGTPFRAAPTVNGXXXXXXXXXXXXXXXXXXXXXXXXRHRGIVESAGILAATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSLTRTGNITSLTELNDIAGRPVIDRGRVYAVSHSGRAVSIDIRTGERVWTRNIAGVQTPWVAGGFIFLVTTDAEVVALSQRDGRIRWIQQLPRFEDEEDRDGPITWSGPVLAGDRLILASSLGEAVSLSPYTGEVLGRVELPDGVYLPPIVANETLYVLTDSADLVALK 444          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A2Z4UGY0_9HYPH (Outer membrane protein assembly factor BamB n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UGY0_9HYPH)

HSP 1 Score: 428 bits (1101), Expect = 3.300e-144
Identity = 212/461 (45.99%), Postives = 297/461 (64.43%), Query Frame = 1
Query:    1 YMLPVLALVSAISLSGCG----LFKASGGPKLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            + +  L LV+A+SL+GC     L  +    ++ GERISV+AL++KLE+DPR+  +EV++P+PYVN DWPQPGGYAD+AMHHL  + +   +WS D G G+  +T +   P+ A G+V+VLD ++ + A +   G   W T L P  E                     AD   GGG+AF+ GR+FVT+G+G   ALDAGTG+ IWR  +  P R+APTVNG                         ++ +VESAGIL + S                             +D+L ++ ++T ++ELNDIAGRPVIDRGRV+A+SHSG  VSID+RTGER+WTRNIAG QTPW+AG FI+++TL+ E+ ALSRRDGR+RW+ +L RF+D+ED++G +EWSGPVLAGDRL+ VSS+G+ +S+SPY+G+ L  I +PD  FVPP++ANETL++LT DA+++A +
Sbjct:    4 WRMATLGLVAAVSLAGCDTIGDLVSSDDKERIPGERISVMALERKLEADPRLASLEVVLPRPYVNEDWPQPGGYADNAMHHLQASGSLDVLWSSDAGSGSSGSTELATAPVTAAGQVYVLDTETVVRAFNSTTGDEAWETELAPEDED--------------------ADEGRGGGVAFESGRLFVTTGFGEAIALDAGTGEIIWRSALGTPFRAAPTVNGXXXXXXXXXXXXXXXXXXXXXXXXRHRGIVESAGILAATSPAVSGSIVVVPYSSGELYALRVENGNSLWSDSLTRTGNVTSLTELNDIAGRPVIDRGRVYAVSHSGRAVSIDIRTGERVWTRNIAGTQTPWVAGGFIFVVTLDAEVVALSRRDGRIRWIQKLERFEDEEDRDGPIEWSGPVLAGDRLVLVSSLGEAVSLSPYSGEELGRIELPDAVFVPPILANETLFVLTDDARVVALK 444          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A523FXH5_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FXH5_9PROT)

HSP 1 Score: 429 bits (1103), Expect = 4.190e-144
Identity = 237/431 (54.99%), Postives = 318/431 (73.78%), Query Frame = 1
Query:   79 KLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            +L+GERISVL+L+Q LE DP + ++EV +P PYVN  WPQPGGYA HAMHHL +    K+VW    G+G+    R+ A P++ DG VFV DA + +SA D   G R+W   L+P     +                       GGG+AF EG++F ++G+GF+ ALD  TG EIWR+ + + IRSAPTV+ GR+F +T DNQL+ALS  DG + WN++A  E+A +L    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+D L ++  LTP++ LNDIAGRPVIDRGRV A+SH+G +VSIDLR+GER+WTR+I  VQTPW+AGD+IY+++++ EI  LSRRDGR+RW+T L++F++++ ++G + WSGPVLAGDRLI VSS G+ +SVSPYTG++L +I +P GSF+ P+VANET+++LT DA+L+A R
Sbjct:   62 RLQGERISVLSLEQTLEVDPDLADIEVALPPPYVNDSWPQPGGYATHAMHHLQIPADIKEVWRVKAGQGSQGGVRLTAPPVVGDGTVFVRDAVASVSAFDAVSGKRLWEVNLKPRKTKSY--------------------MGTGGGVAFAEGKVFASTGFGFIVALDGKTGTEIWRQSLGLAIRSAPTVSNGRLFVSTFDNQLFALSTTDGRIFWNHRATPETARLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDALQRTGQLTPLATLNDIAGRPVIDRGRVIAVSHNGRMVSIDLRSGERVWTRDIGSVQTPWVAGDYIYVVSIDSEIICLSRRDGRIRWITLLQQFENEKKKKGPIFWSGPVLAGDRLIVVSSHGEALSVSPYTGEILGHIDLPHGSFISPIVANETVFLLTDDAKLIALR 472          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A7Y4T5W1_9PROT (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4T5W1_9PROT)

HSP 1 Score: 424 bits (1090), Expect = 1.680e-142
Identity = 213/451 (47.23%), Postives = 286/451 (63.41%), Query Frame = 1
Query:   31 AISLSGCGLFKASGGP----KLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            A SLS C        P    ++KGER++VL     +E DP++    V++PKP VNA+WPQPGGYAD+ MHHL+      + WS   G G+ S+TR+ A P+++ GKV+VLD+Q  +SA D K G R+WR  L P  E                     A+  FGGG+A D  ++FV++G+GFVAAL+A  GKEIWRR   VP R+AP VNGGRVF  TQ+NQL AL+ +DG VLW+++ + ESAGILGS S                             +DTL +S  LTP+S L DI+GRPVIDRG VFA SH+G +V+ID+RTGER WT ++ G Q PW+ GD++Y++T   ++  + R DGRVRW+ QL  ++D E + G + WSGPVL  DRL+AVSS G  +S+SPYTG+VL  I +PD +F+ P+VAN T+Y+LT DA+L A R
Sbjct:   17 AFSLSACETLDQFITPGVKVEVKGERVAVLPSASAVEVDPKLKNDPVVLPKPVVNAEWPQPGGYADNVMHHLSAVGKLNREWSSSIGSGSSSDTRLTASPVVSAGKVYVLDSQVNVSAYDAKSGDRLWRVDLTPNDED--------------------AEEGFGGGVAVDGDKLFVSTGFGFVAALNAKNGKEIWRRSATVPFRAAPVVNGGRVFVATQENQLMALAEDDGRVLWDHRGIAESAGILGSNSVAVSGDLVVVPYTSGELFALNVRNGRPVWSDTLARSGGLTPLSSLADISGRPVIDRGLVFANSHAGRLVAIDMRTGERAWTIDVGGTQRPWVVGDYVYVITDNAQVLCVRRADGRVRWIHQLDAYRDPEGRRGAIAWSGPVLVSDRLVAVSSEGYAVSISPYTGQVLGQIDIPDKAFIAPIVANNTVYVLTDDARLTALR 447          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A2D8RUE1_9HYPH (Pyrrolo-quinoline quinone n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8RUE1_9HYPH)

HSP 1 Score: 424 bits (1089), Expect = 3.220e-142
Identity = 221/449 (49.22%), Postives = 284/449 (63.25%), Query Frame = 1
Query:   37 SLSGC----GLFKASGGPKLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            +L+GC    G+F +     L G+R+SV+ L   LE DP I +  V++P+PYVN DWPQPGG  D+A +HLA      ++WS D G G+    ++ A P+IADGK+FVLDA+S + A D K G R+W T L P GE                     AD   GGG+AFD G+IFV +G+G    LDA +G  +W + +  P R+APT NGGRVFA T DNQ  A + E G VLW ++ +VESAGIL S S                             +D+L ++  LT +SELNDIAGRPVIDR RVFAISHSG +VSIDLRTGER WTR+I GVQTPW+AGD++YL+T   E+ A+SRRDGR+RW+T + R++D ED+E  + WSGPVL  DRLI VSS G   SVSPYTG++L  I +PD   + PVVA+ETLYILT  A L+A +
Sbjct:   28 TLAGCDSVTGMFTSEDKTVLPGKRLSVMELGSTLEVDPAIADELVILPQPYVNPDWPQPGGSPDNANYHLAAPGPLDRLWSVDAGAGSDRVAQLTASPVIADGKIFVLDAESTVRAFDRKTGKRLWETDLVPEGED--------------------ADEGRGGGVAFDNGKIFVVTGFGTGHGLDAASGAIVWTQTLGEPFRAAPTANGGRVFAVTADNQTIAFAQETGEVLWRHRGIVESAGILSSPSPAVAGSVVISPYSSGELVALRVANGTPVWSDSLNRTGRLTSLSELNDIAGRPVIDRDRVFAISHSGRMVSIDLRTGERAWTRDIGGVQTPWVAGDYLYLITNSEELVAISRRDGRIRWITPMPRWEDPEDREDPIVWSGPVLVSDRLILVSSTGDATSVSPYTGEILGRIDLPDDVLIAPVVADETLYILTDSASLIALK 456          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A2A5ET68_9HYPH (Pyrrolo-quinoline quinone n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ET68_9HYPH)

HSP 1 Score: 416 bits (1068), Expect = 3.240e-139
Identity = 211/456 (46.27%), Postives = 289/456 (63.38%), Query Frame = 1
Query:   16 LALVSAISLSGCG----LFKASGGPKLKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            + LVS  +LSGC     LF A  G +L GERISV+AL++ LE+DPRI  ++V++P+PY+N DWPQPGGYAD+AMHHL  + + +  W  D G G+G +  +   P++A+G+V+VLDA++ + A D   G  IW   L P  E                      +   GGG+A++ GRIFVT+G+G   ALD+ +G+ +WR     P R+APT N                          +  + ESAGIL + S                             +D+L ++ ++T ++ELNDIAGRPVIDRGRV+AISHSG  VSID+RTGER+WTRNIAGVQTPW+AG FI+++TLE E+ ALSRRDGR+RW+ QL RF+D+ED++G +EWSGP+LAGDRLI VSS G+  S+SPYTG++L  I +PDG F+ P++ANETLY+LT +A+L+A R
Sbjct:    9 VGLVSLAALSGCDTVSDLFTADLGDRLPGERISVMALERSLEADPRIANLQVVLPRPYLNEDWPQPGGYADNAMHHLQASGSLEPFWRVDAGTGSGGSAILATTPVMAEGRVYVLDAETTVRAFDATTGQEIWEVDLTPEEED--------------------GEEGRGGGVAYEGGRIFVTTGFGETVALDSVSGEVLWRTRAGTPYRAAPTANXXXXXXXXXXXXXXXXXXXXXXXXXXHHGITESAGILSATSPAVSGSIVIAPYSSGELFALRVENGNQLWSDSLTRTGNVTSLTELNDIAGRPVIDRGRVYAISHSGRAVSIDIRTGERVWTRNIAGVQTPWVAGGFIFMVTLEAEVVALSRRDGRIRWIHQLPRFEDEEDRDGAIEWSGPILAGDRLILVSSGGEAASLSPYTGELLGMIELPDGVFIAPIIANETLYVLTDNARLVALR 444          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A0A7Y8MC30_9PROT (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MC30_9PROT)

HSP 1 Score: 397 bits (1019), Expect = 1.300e-131
Identity = 207/458 (45.20%), Postives = 282/458 (61.57%), Query Frame = 1
Query:    7 LPVLALVSAISLSGCGLFKASGGPK---LKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            LP+L  + A S    G+F      K   + G+RIS+L L+Q+LE DPRI +VEV +P P   A W QPGG  DHAM H+AL +T  +VW  + G G+   TRI+A PIIA G+V+VLDA+S + A   + G R+W   L P  E                     A A FGGGIAF +GR++  +G+G   A+DA TG   W + +  P R+APT  GGRVFAT+ DN+L  L A DG ++W+Y+ + E AG+L S+S                             TD+L ++  LT +S LNDIAG PVI  GRV+A+SHSG ++S+DLR GER+WTRNIA V+TPW+AGDF+Y++TL+ ++  LS RDGRVRW+TQL R++D++D+E  + WSGPVLAG RL   SS  +L++ SP  G +LS I +   S++ P VAN+TL++L  D  L AYR
Sbjct:   22 LPLLLALGACSTVS-GIFGGRDDEKKDTIGGQRISILELEQRLEVDPRIADVEVRLPPPATLAAWSQPGGTPDHAMRHIALGDTLSRVWRANAGAGSTRRTRIMAPPIIAGGRVYVLDAESTVRAFSSETGDRLWEVELTPEDER--------------------AAAGFGGGIAFMDGRLYAVTGFGTALAIDAETGAIAWTKTLGTPFRTAPTAVGGRVFATSYDNRLVGLDAADGTLIWSYRGIEEPAGVLASSSPAVSGEIVIAPFSSGELTALRADNGRMAWTDSLTRTGRLTAMSALNDIAGSPVISAGRVYAVSHSGRLISVDLRIGERVWTRNIASVETPWVAGDFLYIVTLDAQLVCLSARDGRVRWITQLPRWEDEDDEEDAIAWSGPVLAGGRLWLTSSDERLVAASPNDGGILSEIELSAPSYIRPAVANDTLFLLLDDGTLEAYR 458          
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Match: A7HYV9_PARL1 (Pyrrolo-quinoline quinone n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HYV9_PARL1)

HSP 1 Score: 394 bits (1012), Expect = 1.640e-130
Identity = 209/458 (45.63%), Postives = 277/458 (60.48%), Query Frame = 1
Query:   13 VLALVSAISLSGC----GLFKASGGPK-LKGERISVLALDQKLESDPRIGEVEVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTRILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIWPPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIWRRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAGILGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTLIKSSHLTPISELNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAGDFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAGDRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDAQLLAYR 1371
            +L LV  I L+GC     +F +      L G+R+SV+ L   LE DP I +  V++P+PYVN  WPQPGG AD+ MHHLA   + +++WS D G G+G   +++A P+IADGK+FVLDA++ + A D+  G R+W   L P GE                          GGG+AFD GR+FV +G+G   ALDA  G  IW + +  P R+APT N                          ++ + ESAGIL S S                             +D+L ++ ++T + ELNDIAGRPVIDRGRVFAISHSG +VSIDLRTGER+WTR I GVQTPW+AGDFI+L+T   E+ A+SRRDGR+RW+T L RF+D ED+EG +EWSGPVL  DRL+ VSS G  +S+SPYTG++L  I +P G+ + PVVANETLYILT +A+L+A +
Sbjct:   25 LLGLV-VIGLAGCDTVGNMFSSDDNKTVLPGKRLSVMELGAALEVDPEIADEAVVLPQPYVNEAWPQPGGTADNVMHHLAAPGSLQRIWSVDAGAGSGRVAQLVASPVIADGKIFVLDAETNVRAFDQATGKRLWAAELVPDGED--------------------GREGRGGGVAFDGGRVFVVTGFGTAFALDAAAGTVIWTQKLGEPFRAAPTANXXXXXXXXXXXXXXXXXXXXXXXXXRHRGIAESAGILSSTSPAVAGAIVIAPYSSGELVALRVENGSPVWSDSLTRTGNVTSLGELNDIAGRPVIDRGRVFAISHSGRMVSIDLRTGERVWTREIGGVQTPWLAGDFIFLVTNNQEVLAISRRDGRIRWITPLPRFEDPEDREGPIEWSGPVLVSDRLVLVSSEGDAVSISPYTGEMLGRIDLPRGTLIAPVVANETLYILTRNAELVALK 461          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5341.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LQ47_9PROT4.640e-21371.21Pyrrolo-quinoline quinone n=3 Tax=Alphaproteobacte... [more]
A0A2N3E9K9_9PROT2.150e-14548.03Pyrrolo-quinoline quinone n=1 Tax=Alphaproteobacte... [more]
A0A2E5BS34_9HYPH1.650e-14452.30Pyrrolo-quinoline quinone n=1 Tax=Rhodobiaceae bac... [more]
A0A2Z4UGY0_9HYPH3.300e-14445.99Outer membrane protein assembly factor BamB n=3 Ta... [more]
A0A523FXH5_9PROT4.190e-14454.99Pyrrolo-quinoline quinone n=1 Tax=Alphaproteobacte... [more]
A0A7Y4T5W1_9PROT1.680e-14247.23PQQ-binding-like beta-propeller repeat protein n=1... [more]
A0A2D8RUE1_9HYPH3.220e-14249.22Pyrrolo-quinoline quinone n=2 Tax=Hyphomicrobiales... [more]
A0A2A5ET68_9HYPH3.240e-13946.27Pyrrolo-quinoline quinone n=1 Tax=Rhodobiaceae bac... [more]
A0A7Y8MC30_9PROT1.300e-13145.20PQQ-binding-like beta-propeller repeat protein n=1... [more]
A7HYV9_PARL11.640e-13045.63Pyrrolo-quinoline quinone n=1 Tax=Parvibaculum lav... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5341contigP-wetherbeei_contig5341:2171..3544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1282876.BAOK01000001_gene2424
Preferred namebamB
PFAMsPQQ_2,PQQ_3
Model size1374
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K17713
KEGG TC1.B.33.1
Hectar predicted targeting categorysignal peptide
Exons1
Evalue6.86e-143
EggNOG OGsCOG1520@1|root,COG1520@2|Bacteria,1MXIJ@1224|Proteobacteria,2TUAD@28211|Alphaproteobacteria,4BQ2V@82117|unclassified Alphaproteobacteria
DescriptionPQQ-like domain
Cds size1371
COG categoryS
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186799.0296-UTR-P-wetherbeei_contig5341:2170..21731683186799.0296-UTR-P-wetherbeei_contig5341:2170..2173Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5341 2171..2173 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186799.0408382-CDS-P-wetherbeei_contig5341:2173..35441683186799.0408382-CDS-P-wetherbeei_contig5341:2173..3544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5341 2174..3544 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5341.3.1prot_P-wetherbeei_contig5341.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5341 2174..3544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5341.3.1

>prot_P-wetherbeei_contig5341.3.1 ID=prot_P-wetherbeei_contig5341.3.1|Name=mRNA_P-wetherbeei_contig5341.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=457bp
MLPVLALVSAISLSGCGLFKASGGPKLKGERISVLALDQKLESDPRIGEV
EVMVPKPYVNADWPQPGGYADHAMHHLALAETPKKVWSGDGGKGAGSNTR
ILAEPIIADGKVFVLDAQSGISALDEKKGGRIWRTVLEPTGETDFGFSIW
PPSLPFVSGAAEAADASFGGGIAFDEGRIFVTSGYGFVAALDAGTGKEIW
RRPVNVPIRSAPTVNGGRVFATTQDNQLYALSAEDGHVLWNYQALVESAG
ILGSASPAVAGDTVVAPFTSGELVALRAENGRTAWTDTLIKSSHLTPISE
LNDIAGRPVIDRGRVFAISHSGNIVSIDLRTGERIWTRNIAGVQTPWIAG
DFIYLLTLEGEITALSRRDGRVRWVTQLRRFKDQEDQEGRVEWSGPVLAG
DRLIAVSSMGQLISVSPYTGKVLSYITVPDGSFVPPVVANETLYILTHDA
QLLAYR*
back to top

mRNA from alignment at P-wetherbeei_contig5341:2171..3544+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5341.3.1 ID=mRNA_P-wetherbeei_contig5341.3.1|Name=mRNA_P-wetherbeei_contig5341.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1374bp|location=Sequence derived from alignment at P-wetherbeei_contig5341:2171..3544+ (Phaeothamnion wetherbeei SAG_119_79)
TATATGTTGCCAGTGTTGGCTTTGGTAAGCGCTATATCGTTGAGCGGGTG TGGTCTGTTCAAGGCGTCGGGCGGGCCGAAACTGAAAGGCGAACGCATAT CGGTGCTGGCGCTGGACCAGAAACTGGAATCCGATCCGCGCATTGGTGAA GTTGAGGTCATGGTTCCCAAGCCCTATGTGAATGCGGACTGGCCGCAACC GGGCGGGTATGCCGACCATGCGATGCATCATTTGGCGCTGGCGGAAACGC CTAAAAAAGTCTGGAGCGGTGATGGCGGCAAGGGCGCGGGAAGCAACACG CGCATACTTGCGGAACCGATTATTGCGGATGGCAAGGTCTTTGTGCTGGA CGCCCAGTCGGGGATCAGCGCGCTGGATGAGAAAAAGGGCGGGCGCATCT GGCGTACGGTTCTTGAGCCAACCGGCGAAACGGATTTCGGATTTTCCATT TGGCCGCCATCGCTTCCATTTGTATCGGGTGCAGCAGAGGCGGCGGATGC TTCCTTCGGGGGCGGCATCGCCTTTGATGAGGGACGTATTTTTGTCACCA GCGGCTATGGATTCGTGGCCGCGCTGGACGCGGGGACAGGCAAGGAAATC TGGCGTCGTCCCGTGAATGTGCCCATTCGCAGCGCGCCCACGGTCAATGG CGGGCGGGTGTTCGCCACTACGCAGGATAATCAGCTTTACGCCCTGTCAG CAGAGGATGGCCATGTTCTGTGGAACTATCAGGCGCTGGTCGAAAGTGCC GGCATTCTTGGCAGCGCATCGCCTGCTGTTGCCGGGGATACGGTCGTTGC CCCCTTTACATCAGGGGAACTGGTGGCCTTGCGGGCGGAAAATGGCCGCA CCGCCTGGACCGATACGCTGATCAAAAGCAGTCATCTGACGCCCATATCC GAGCTGAATGATATTGCGGGCCGTCCGGTGATTGACCGGGGCCGCGTGTT CGCCATCAGCCATTCCGGCAATATTGTTTCCATTGATCTGCGCACCGGTG AACGTATCTGGACGCGCAATATTGCAGGCGTGCAGACGCCGTGGATTGCG GGTGATTTTATTTATCTGCTGACGCTGGAAGGCGAGATTACGGCGCTGTC ACGGCGCGATGGCCGGGTGCGCTGGGTCACGCAATTGCGGCGCTTCAAGG ATCAGGAAGATCAGGAAGGCCGTGTGGAATGGAGCGGACCGGTATTGGCG GGCGACCGGCTGATTGCCGTGTCCAGTATGGGCCAGTTGATTTCTGTGTC GCCGTATACTGGCAAGGTACTAAGTTATATCACCGTTCCGGATGGATCCT TCGTGCCTCCTGTGGTGGCCAATGAGACGCTATATATCCTGACACATGAT GCGCAATTATTGGCGTACCGTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5341:2171..3544+

>mRNA_P-wetherbeei_contig5341.3.1 ID=mRNA_P-wetherbeei_contig5341.3.1|Name=mRNA_P-wetherbeei_contig5341.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1371bp|location=Sequence derived from alignment at P-wetherbeei_contig5341:2171..3544+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTGCCAGTGTTGGCTTTGGTAAGCGCTATATCGTTGAGCGGGTGTGG
TCTGTTCAAGGCGTCGGGCGGGCCGAAACTGAAAGGCGAACGCATATCGG
TGCTGGCGCTGGACCAGAAACTGGAATCCGATCCGCGCATTGGTGAAGTT
GAGGTCATGGTTCCCAAGCCCTATGTGAATGCGGACTGGCCGCAACCGGG
CGGGTATGCCGACCATGCGATGCATCATTTGGCGCTGGCGGAAACGCCTA
AAAAAGTCTGGAGCGGTGATGGCGGCAAGGGCGCGGGAAGCAACACGCGC
ATACTTGCGGAACCGATTATTGCGGATGGCAAGGTCTTTGTGCTGGACGC
CCAGTCGGGGATCAGCGCGCTGGATGAGAAAAAGGGCGGGCGCATCTGGC
GTACGGTTCTTGAGCCAACCGGCGAAACGGATTTCGGATTTTCCATTTGG
CCGCCATCGCTTCCATTTGTATCGGGTGCAGCAGAGGCGGCGGATGCTTC
CTTCGGGGGCGGCATCGCCTTTGATGAGGGACGTATTTTTGTCACCAGCG
GCTATGGATTCGTGGCCGCGCTGGACGCGGGGACAGGCAAGGAAATCTGG
CGTCGTCCCGTGAATGTGCCCATTCGCAGCGCGCCCACGGTCAATGGCGG
GCGGGTGTTCGCCACTACGCAGGATAATCAGCTTTACGCCCTGTCAGCAG
AGGATGGCCATGTTCTGTGGAACTATCAGGCGCTGGTCGAAAGTGCCGGC
ATTCTTGGCAGCGCATCGCCTGCTGTTGCCGGGGATACGGTCGTTGCCCC
CTTTACATCAGGGGAACTGGTGGCCTTGCGGGCGGAAAATGGCCGCACCG
CCTGGACCGATACGCTGATCAAAAGCAGTCATCTGACGCCCATATCCGAG
CTGAATGATATTGCGGGCCGTCCGGTGATTGACCGGGGCCGCGTGTTCGC
CATCAGCCATTCCGGCAATATTGTTTCCATTGATCTGCGCACCGGTGAAC
GTATCTGGACGCGCAATATTGCAGGCGTGCAGACGCCGTGGATTGCGGGT
GATTTTATTTATCTGCTGACGCTGGAAGGCGAGATTACGGCGCTGTCACG
GCGCGATGGCCGGGTGCGCTGGGTCACGCAATTGCGGCGCTTCAAGGATC
AGGAAGATCAGGAAGGCCGTGTGGAATGGAGCGGACCGGTATTGGCGGGC
GACCGGCTGATTGCCGTGTCCAGTATGGGCCAGTTGATTTCTGTGTCGCC
GTATACTGGCAAGGTACTAAGTTATATCACCGTTCCGGATGGATCCTTCG
TGCCTCCTGTGGTGGCCAATGAGACGCTATATATCCTGACACATGATGCG
CAATTATTGGCGTACCGTTAG
back to top