mRNA_P-wetherbeei_contig53392.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: A0A7C9GG52_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9GG52_9PROT) HSP 1 Score: 90.5 bits (223), Expect = 1.070e-19 Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQS-AYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PVRY TMFHMTNDSHLF T+ LE AY ++G RWR+G EEF+PL GK V+ +DHRAASV VD
Sbjct: 317 PVRYFTMFHMTNDSHLFQTRAALEAGGAYRVAGNRWRRGEEEFLPLYEGKMVQAYDHRAASVEVD 381
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: A0A7C6W297_9GAMM (Restriction endonuclease n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6W297_9GAMM) HSP 1 Score: 88.6 bits (218), Expect = 5.090e-19 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQSA-YPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PVRY TMFHMTNDSHLF + +LE + YP+ G RWRKG +E+VPL VG+ + Q+DHRAA V V+
Sbjct: 389 PVRYTTMFHMTNDSHLFKRRDELEAAGFYPVGGHRWRKGKDEYVPLYVGRMIHQYDHRAAGVEVN 453
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: A0A6S6G178_9SPHN (Restriction endonuclease n=1 Tax=Sphingomonas sp. HMP6 TaxID=1517551 RepID=A0A6S6G178_9SPHN) HSP 1 Score: 85.5 bits (210), Expect = 6.210e-18 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQS--AYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PV Y TMFHMTNDSHLF TK +LE+ A+PI G RW+ E+VPL VG+ + QFDHRAASV V+
Sbjct: 1045 PVMYATMFHMTNDSHLFRTKLELEEQEGAWPIGGNRWQSKDGEWVPLYVGRMIHQFDHRAASVTVN 1110
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: UPI00145D86A7 (restriction endonuclease n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145D86A7) HSP 1 Score: 84.0 bits (206), Expect = 2.160e-17 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQSA-YPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PVRY TMFHMTNDSHLF + +L+ + YP+ G RW G E++VPL VG+ + Q+DHRAA V V+
Sbjct: 1048 PVRYATMFHMTNDSHLFKRRDELDAAGFYPVKGNRWSNGQEDYVPLYVGRMIHQYDHRAAGVEVN 1112
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: A0A7C1W2U6_9GAMM (Restriction endonuclease n=1 Tax=Thioploca sp. TaxID=2268140 RepID=A0A7C1W2U6_9GAMM) HSP 1 Score: 84.0 bits (206), Expect = 2.160e-17 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQSA-YPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PVRY TMFHMTNDSHLF + +LE YP+ WR+GSEEFVPL GK V+ +DHRAAS+ V+
Sbjct: 1048 PVRYTTMFHMTNDSHLFKRQQELEADGFYPVGKHIWRRGSEEFVPLYEGKMVQAYDHRAASITVN 1112
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: A0A6N3X4F3_9SYNE (Restriction endonuclease (Fragment) n=1 Tax=Candidatus Synechococcus spongiarum 142 TaxID=1608213 RepID=A0A6N3X4F3_9SYNE) HSP 1 Score: 83.6 bits (205), Expect = 2.920e-17 Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQS--AYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PV+Y TMFHMTNDSHLF TK +LE+ A+P+ G RW E+VPL GK V+ FDHRAASV+V+
Sbjct: 320 PVKYSTMFHMTNDSHLFRTKEELEEQEGAFPLGGNRWDSPKGEWVPLYEGKMVQAFDHRAASVVVN 385
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: UPI001AEFAA62 (hypothetical protein n=1 Tax=Caulobacter sp. FWC26 TaxID=69665 RepID=UPI001AEFAA62) HSP 1 Score: 83.2 bits (204), Expect = 3.890e-17 Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQ--SAYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PVRY TMFHMTNDSHLF T+ +LE+ A+PI G R+R S +++PL G+ + QFDHRAASV V+
Sbjct: 198 PVRYATMFHMTNDSHLFRTRAELEEREGAWPIGGNRFRSASGDWLPLYAGRMIHQFDHRAASVTVN 263
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: UPI0019D6A4C1 (hypothetical protein n=1 Tax=Sphingomonas oligophenolica TaxID=301154 RepID=UPI0019D6A4C1) HSP 1 Score: 83.2 bits (204), Expect = 3.950e-17 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQS--AYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PV+Y TMFHMTNDSHLF TK +LE++ A+PI G RW+ + E+V L GK V+ FDHRAASV+V+
Sbjct: 234 PVKYATMFHMTNDSHLFRTKVELEEAEGAWPIGGNRWQSKAGEWVQLYEGKMVQAFDHRAASVVVN 299
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: UPI001C4DF3DF (hypothetical protein n=1 Tax=Sphingopyxis sp. KK2 TaxID=1855727 RepID=UPI001C4DF3DF) HSP 1 Score: 81.6 bits (200), Expect = 1.400e-16 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQS--AYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
P++Y TMFHMTNDSHLF T+ +LE S A+P G W+ +EE+VPL GK V+ FDHRAASV+++
Sbjct: 1063 PIKYATMFHMTNDSHLFRTRAELEGSEGAWPTGGNCWQSATEEWVPLYEGKMVQAFDHRAASVVLN 1128
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Match: A0A6B1FBH4_9SYNE (N-6 DNA methylase (Fragment) n=1 Tax=Synechococcus sp. SB0676_bin_10 TaxID=2604869 RepID=A0A6B1FBH4_9SYNE) HSP 1 Score: 81.3 bits (199), Expect = 1.910e-16 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 1 PVRYMTMFHMTNDSHLFFTKTQLEQ--SAYPISGGRWRKGSEEFVPLLVGKSVKQFDHRAASVLVD 192
PV+Y TMFHMTNDSHLF TK +LE+ A+P+ G RW +VPL GK V+ FDHRAASV+V+
Sbjct: 664 PVKYSTMFHMTNDSHLFRTKEELEEREGAFPVGGNRWDSPKGVWVPLYEGKMVQAFDHRAASVVVN 729 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53392.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53392.1.1 >prot_P-wetherbeei_contig53392.1.1 ID=prot_P-wetherbeei_contig53392.1.1|Name=mRNA_P-wetherbeei_contig53392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp MTMFHMTNDSHLFFTKTQLEQSAYPISGGRWRKGSEEFVPLLVGKSVKQFback to top mRNA from alignment at P-wetherbeei_contig53392:307..498+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53392.1.1 ID=mRNA_P-wetherbeei_contig53392.1.1|Name=mRNA_P-wetherbeei_contig53392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig53392:307..498+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53392:307..498+ >mRNA_P-wetherbeei_contig53392.1.1 ID=mRNA_P-wetherbeei_contig53392.1.1|Name=mRNA_P-wetherbeei_contig53392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig53392:307..498+ (Phaeothamnion wetherbeei SAG_119_79)back to top |