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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2714 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 2364 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186798.4273577-UTR-P-wetherbeei_contig5335:1191..1258 | 1683186798.4273577-UTR-P-wetherbeei_contig5335:1191..1258 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5335 1192..1258 - |
| 1683186798.4434037-UTR-P-wetherbeei_contig5335:3622..3905 | 1683186798.4434037-UTR-P-wetherbeei_contig5335:3622..3905 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5335 3623..3905 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186798.4357483-CDS-P-wetherbeei_contig5335:1258..3622 | 1683186798.4357483-CDS-P-wetherbeei_contig5335:1258..3622 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig5335 1259..3622 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5335.1.1 >prot_P-wetherbeei_contig5335.1.1 ID=prot_P-wetherbeei_contig5335.1.1|Name=mRNA_P-wetherbeei_contig5335.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=788bp
MVQPSRHAVTESAAIAKPAAKDAVAAQSDQPASAQQLPHGASCAARQQLS
ATSAARRISTPHKPAGLPQQRRTVNSKPKASNGTRRTFQSSPSSRSSGAA
ALISPHSAAAAVEAPRAAPTVISQAAATARASAGSNGSSRGGEGNNSGGN
AGRSGGRSGGDGRETCGQDACGDNGGCGCDVTINGFSIIDLGLPQCNIGP
EGAAAGSDSFMTCAEERPAEKGPIASTAEAEALSDAAKALPSVEGSATVS
HWHGPSADVAAAAPSVSVTAVARTEQPGRCSPTDGASVGTGRRGSASLGE
HAARDRSADENVLPVSDSSAAADDANAGRVPVARAAGEEREDLLPAVSAT
AAPAVEESFTSDTWGRRGSGKRPRGSLGFPSRAEMAATERGGGGGGARRY
SSGAGHPARGSGGFEAIRAAAGAAEAGAAAVPTGLASLAEAAGASGGQPP
LGAQATGQTAGMPRASSGAAASSGIDQVSNPSGVAAVTATGAADGDENGI
GDGGSGGAFRRGSGGIVVGLAATSGDDTPRSAAAVFAAADAAIAAAAAVA
DEDDDGGYDDDFLNEIGDQEGPRLPASAEKEECDKLLMSIAPQDTQKHGT
AALSVPAATAVAADATAVAAVAAATAAAAAVPAAATTTGTALPGQPPRRL
TSSASAVSESDASASLLAGEAFGRSLSLHEEPSFAACFAAEDPAPTAAAA
TVAAVTVEENYDDAIYSEDDDEAGNGYDDGDGGVGGGDGDGAAGADGGSG
DGGDDASGSFAEAALPAAMGETEEGAQDQESYTDDDF* back to topmRNA from alignment at P-wetherbeei_contig5335:1192..3905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig5335.1.1 ID=mRNA_P-wetherbeei_contig5335.1.1|Name=mRNA_P-wetherbeei_contig5335.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2714bp|location=Sequence derived from alignment at P-wetherbeei_contig5335:1192..3905- (Phaeothamnion wetherbeei SAG_119_79)
GGACGAAGAGAGGGAGCAGCTGGATGCTCGGGCAGAAAGCAAGGGCACCG
CCGCCGCCGCCGCCGCTGCCGTCAATGCCGCTGCTCCGCCACGTCCGTCA
GCCGCATGCACGAATGGAACTAGCCCACTTGGGCAGCGTCGCACTGGTGG
CAGCGACGGCAGCGGCGGCGGCAGAAGCGACTGTGGCGACGGCGGCGGCG
GCGACGGCGGCGACGACGGTGGCGGCCATTGCGGCAACAGCGGTAATAGC
CGCGGTAGCGACGGCGCCAGGGCAGGAATTGCGATGGTGCAGCCTTCGCG
ACATGCGGTGACAGAGTCTGCAGCAATCGCCAAACCTGCAGCAAAGGATG
CCGTTGCAGCGCAAAGCGACCAGCCCGCCAGTGCTCAGCAGCTGCCGCAC
GGCGCGAGCTGTGCGGCACGGCAGCAGCTATCCGCCACCTCAGCCGCAAG
AAGGATTTCCACTCCACACAAGCCGGCTGGCCTTCCACAACAGAGAAGAA
CGGTAAACAGCAAGCCGAAAGCAAGCAATGGCACTAGACGCACATTCCAG
AGCTCACCGTCGTCCCGGTCGTCTGGAGCAGCGGCTTTGATCAGCCCCCA
CAGCGCCGCTGCCGCTGTTGAGGCGCCCCGGGCCGCTCCTACCGTCATCT
CCCAAGCGGCGGCGACAGCGCGAGCGTCCGCAGGCAGCAATGGCAGCAGT
AGAGGCGGTGAAGGCAACAACAGTGGCGGGAATGCTGGCAGGAGCGGCGG
CAGGAGCGGCGGCGACGGGCGTGAGACCTGTGGCCAAGATGCCTGCGGCG
ATAACGGCGGCTGCGGCTGCGACGTGACCATCAACGGTTTTTCCATCATT
GACCTCGGGTTACCGCAATGCAACATTGGGCCGGAGGGCGCGGCAGCGGG
ATCCGACAGCTTTATGACCTGTGCAGAAGAAAGGCCGGCAGAAAAAGGTC
CGATCGCGTCCACTGCAGAAGCGGAAGCGCTCTCAGACGCAGCAAAAGCA
CTGCCGTCGGTCGAAGGTAGCGCCACGGTCTCTCACTGGCATGGTCCGTC
CGCTGACGTCGCCGCGGCAGCACCTTCAGTCAGCGTTACGGCGGTTGCCA
GGACTGAGCAGCCTGGGCGATGCAGCCCCACTGACGGCGCTTCTGTTGGC
ACTGGCCGCCGTGGGAGTGCTTCTCTCGGAGAGCACGCGGCAAGGGATCG
TTCGGCCGACGAAAATGTCCTGCCAGTGAGCGATTCGTCTGCTGCTGCCG
ACGACGCCAATGCAGGAAGGGTTCCAGTCGCACGTGCAGCAGGAGAAGAA
AGAGAAGACCTCCTGCCTGCGGTGTCAGCAACAGCGGCGCCGGCGGTCGA
GGAGAGTTTTACAAGTGATACTTGGGGGCGGAGGGGCAGTGGCAAGCGCC
CCCGCGGCTCGCTGGGTTTTCCCAGTCGGGCGGAGATGGCGGCGACCGAG
CGCGGTGGCGGCGGTGGCGGCGCCAGGCGGTACTCTTCGGGTGCTGGCCA
TCCAGCACGAGGGAGTGGCGGTTTCGAGGCAATCCGTGCGGCTGCTGGGG
CTGCTGAGGCAGGGGCAGCAGCGGTTCCCACAGGGCTTGCCTCGCTTGCT
GAAGCTGCTGGAGCATCAGGAGGCCAGCCGCCACTCGGCGCGCAGGCGAC
AGGGCAGACTGCGGGAATGCCGCGGGCTTCATCAGGCGCTGCTGCATCTT
CGGGTATCGACCAAGTATCCAATCCGTCCGGGGTTGCGGCAGTTACCGCG
ACTGGCGCTGCAGATGGCGACGAGAACGGCATCGGTGACGGCGGAAGCGG
AGGTGCATTCCGGCGTGGTAGTGGCGGGATCGTCGTCGGCTTAGCGGCCA
CTAGCGGCGACGACACGCCGCGCTCTGCCGCAGCCGTTTTCGCCGCAGCA
GACGCCGCTATCGCCGCTGCGGCTGCAGTAGCAGACGAAGACGACGACGG
CGGCTATGACGACGACTTTTTAAACGAGATAGGCGATCAGGAAGGCCCGC
GCTTGCCCGCATCTGCCGAAAAGGAGGAATGCGACAAATTGCTGATGTCT
ATTGCGCCGCAGGACACTCAGAAGCACGGAACTGCTGCTTTGTCAGTGCC
GGCAGCAACGGCGGTGGCGGCGGATGCGACAGCAGTGGCAGCGGTAGCGG
CAGCGACGGCGGCGGCGGCAGCGGTTCCGGCGGCGGCAACGACGACGGGG
ACTGCGCTCCCGGGGCAGCCGCCCAGAAGACTGACGTCGAGCGCCAGCGC
AGTAAGCGAGAGCGACGCCTCCGCGTCGCTGCTGGCTGGCGAGGCGTTTG
GCCGGTCGCTGTCGTTGCACGAGGAGCCATCTTTCGCTGCATGCTTTGCG
GCGGAAGACCCCGCCCCGACGGCGGCGGCGGCAACGGTGGCGGCGGTGAC
AGTGGAAGAAAACTATGACGATGCCATTTACAGCGAAGACGACGACGAGG
CCGGCAATGGTTATGACGACGGCGACGGCGGCGTTGGGGGCGGCGACGGT
GATGGCGCCGCTGGGGCCGATGGCGGGAGCGGCGACGGTGGCGACGATGC
CAGCGGCAGCTTTGCCGAGGCGGCATTGCCGGCCGCGATGGGCGAGACCG
AAGAAGGTGCACAAGACCAAGAATCTTACACCGACGACGACTTTTAAGAT
GAGCGAACAGCTGCGCACTTAGAGAAATTGCGAACACACAAGAAAAAGAA
AAGGTACATGGATG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig5335:1192..3905- >mRNA_P-wetherbeei_contig5335.1.1 ID=mRNA_P-wetherbeei_contig5335.1.1|Name=mRNA_P-wetherbeei_contig5335.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2364bp|location=Sequence derived from alignment at P-wetherbeei_contig5335:1192..3905- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGCAGCCTTCGCGACATGCGGTGACAGAGTCTGCAGCAATCGCCAA
ACCTGCAGCAAAGGATGCCGTTGCAGCGCAAAGCGACCAGCCCGCCAGTG
CTCAGCAGCTGCCGCACGGCGCGAGCTGTGCGGCACGGCAGCAGCTATCC
GCCACCTCAGCCGCAAGAAGGATTTCCACTCCACACAAGCCGGCTGGCCT
TCCACAACAGAGAAGAACGGTAAACAGCAAGCCGAAAGCAAGCAATGGCA
CTAGACGCACATTCCAGAGCTCACCGTCGTCCCGGTCGTCTGGAGCAGCG
GCTTTGATCAGCCCCCACAGCGCCGCTGCCGCTGTTGAGGCGCCCCGGGC
CGCTCCTACCGTCATCTCCCAAGCGGCGGCGACAGCGCGAGCGTCCGCAG
GCAGCAATGGCAGCAGTAGAGGCGGTGAAGGCAACAACAGTGGCGGGAAT
GCTGGCAGGAGCGGCGGCAGGAGCGGCGGCGACGGGCGTGAGACCTGTGG
CCAAGATGCCTGCGGCGATAACGGCGGCTGCGGCTGCGACGTGACCATCA
ACGGTTTTTCCATCATTGACCTCGGGTTACCGCAATGCAACATTGGGCCG
GAGGGCGCGGCAGCGGGATCCGACAGCTTTATGACCTGTGCAGAAGAAAG
GCCGGCAGAAAAAGGTCCGATCGCGTCCACTGCAGAAGCGGAAGCGCTCT
CAGACGCAGCAAAAGCACTGCCGTCGGTCGAAGGTAGCGCCACGGTCTCT
CACTGGCATGGTCCGTCCGCTGACGTCGCCGCGGCAGCACCTTCAGTCAG
CGTTACGGCGGTTGCCAGGACTGAGCAGCCTGGGCGATGCAGCCCCACTG
ACGGCGCTTCTGTTGGCACTGGCCGCCGTGGGAGTGCTTCTCTCGGAGAG
CACGCGGCAAGGGATCGTTCGGCCGACGAAAATGTCCTGCCAGTGAGCGA
TTCGTCTGCTGCTGCCGACGACGCCAATGCAGGAAGGGTTCCAGTCGCAC
GTGCAGCAGGAGAAGAAAGAGAAGACCTCCTGCCTGCGGTGTCAGCAACA
GCGGCGCCGGCGGTCGAGGAGAGTTTTACAAGTGATACTTGGGGGCGGAG
GGGCAGTGGCAAGCGCCCCCGCGGCTCGCTGGGTTTTCCCAGTCGGGCGG
AGATGGCGGCGACCGAGCGCGGTGGCGGCGGTGGCGGCGCCAGGCGGTAC
TCTTCGGGTGCTGGCCATCCAGCACGAGGGAGTGGCGGTTTCGAGGCAAT
CCGTGCGGCTGCTGGGGCTGCTGAGGCAGGGGCAGCAGCGGTTCCCACAG
GGCTTGCCTCGCTTGCTGAAGCTGCTGGAGCATCAGGAGGCCAGCCGCCA
CTCGGCGCGCAGGCGACAGGGCAGACTGCGGGAATGCCGCGGGCTTCATC
AGGCGCTGCTGCATCTTCGGGTATCGACCAAGTATCCAATCCGTCCGGGG
TTGCGGCAGTTACCGCGACTGGCGCTGCAGATGGCGACGAGAACGGCATC
GGTGACGGCGGAAGCGGAGGTGCATTCCGGCGTGGTAGTGGCGGGATCGT
CGTCGGCTTAGCGGCCACTAGCGGCGACGACACGCCGCGCTCTGCCGCAG
CCGTTTTCGCCGCAGCAGACGCCGCTATCGCCGCTGCGGCTGCAGTAGCA
GACGAAGACGACGACGGCGGCTATGACGACGACTTTTTAAACGAGATAGG
CGATCAGGAAGGCCCGCGCTTGCCCGCATCTGCCGAAAAGGAGGAATGCG
ACAAATTGCTGATGTCTATTGCGCCGCAGGACACTCAGAAGCACGGAACT
GCTGCTTTGTCAGTGCCGGCAGCAACGGCGGTGGCGGCGGATGCGACAGC
AGTGGCAGCGGTAGCGGCAGCGACGGCGGCGGCGGCAGCGGTTCCGGCGG
CGGCAACGACGACGGGGACTGCGCTCCCGGGGCAGCCGCCCAGAAGACTG
ACGTCGAGCGCCAGCGCAGTAAGCGAGAGCGACGCCTCCGCGTCGCTGCT
GGCTGGCGAGGCGTTTGGCCGGTCGCTGTCGTTGCACGAGGAGCCATCTT
TCGCTGCATGCTTTGCGGCGGAAGACCCCGCCCCGACGGCGGCGGCGGCA
ACGGTGGCGGCGGTGACAGTGGAAGAAAACTATGACGATGCCATTTACAG
CGAAGACGACGACGAGGCCGGCAATGGTTATGACGACGGCGACGGCGGCG
TTGGGGGCGGCGACGGTGATGGCGCCGCTGGGGCCGATGGCGGGAGCGGC
GACGGTGGCGACGATGCCAGCGGCAGCTTTGCCGAGGCGGCATTGCCGGC
CGCGATGGGCGAGACCGAAGAAGGTGCACAAGACCAAGAATCTTACACCG
ACGACGACTTTTAA back to top
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