mRNA_P-wetherbeei_contig53290.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A7C9KCG1_9PROT (ABC transporter permease subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KCG1_9PROT) HSP 1 Score: 191 bits (485), Expect = 2.180e-58 Identity = 96/161 (59.63%), Postives = 129/161 (80.12%), Query Frame = 1
Query: 1 LLLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRL 483
+L G+RRFL V++ YI LA PK++FLPI+MV+FG+G GSKIAMAA+SAFFPV +S G LL+NP ++V RSF A W +V +YLPS++ P++TGLRLGLGVAI+GTL+AEIKLSN GLG++ IQ+Y FR +MYAV+I+IFA+A+G NA+M ++
Sbjct: 62 ILFGVRRFLGRVMDGYILALAPAPKVVFLPILMVVFGIGVGSKIAMAAMSAFFPVVLSTVAGMLLINPTFIKVGRSFNAGPWQMVSKVYLPSLVLPVITGLRLGLGVAIIGTLIAEIKLSNAGLGFLAIQYYEMFRIPEMYAVIIVIFALAMGANALMTKV 222
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A1F4AY07_9PROT (ABC transmembrane type-1 domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AY07_9PROT) HSP 1 Score: 186 bits (472), Expect = 1.410e-56 Identity = 98/167 (58.68%), Postives = 126/167 (75.45%), Query Frame = 1
Query: 4 LLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAGHFQHK 504
L+G+ FL + PYI+ LA TPKIIFLP++M++FGV GSKIAM AISAFFPV V+ Y LV PVL+RVARSF+AS+W V +Y PS++P ++TG+RLGLGVAI+GTLLAEIKLSN+GLG++ IQ Y F D+YAVL+IIF +AV N + R+A Q +
Sbjct: 53 LMGVAVFLGRMAHPYIHVLAPTPKIIFLPVLMILFGVDIGSKIAMGAISAFFPVVVATYDSVRLVPPVLLRVARSFRASRWQTVVKVYFPSMLPAVVTGMRLGLGVAIIGTLLAEIKLSNRGLGFLAIQRYEGFHIPDLYAVLLIIFVLAVAANIAIGRVADRLQRR 219
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: UPI001C1EC64C (ABC transporter permease n=1 Tax=Rhizobium sp. WYJ-E13 TaxID=2849093 RepID=UPI001C1EC64C) HSP 1 Score: 181 bits (458), Expect = 6.030e-54 Identity = 95/160 (59.38%), Postives = 123/160 (76.88%), Query Frame = 1
Query: 25 LAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAGHFQHK 504
LA +L P++NYLA TPKI+FLPI+++ FGVG GSKIAMA+ISAFFPVA++ YRG +N V +RVA SF A++ ++ ++LPS++ P++T LRL LGVA VGTLLAEIKLSN+GLGY++IQHYN R DMYA+LII FAI + NA MD L +
Sbjct: 105 LARLLSPWVNYLAPTPKIVFLPILLLGFGVGMGSKIAMASISAFFPVAMATYRGVQQINGVHIRVAFSFNATRMQLLTKVFLPSLVAPVVTALRLALGVAFVGTLLAEIKLSNQGLGYLIIQHYNAMRIPDMYAILIITFAIVMAANAAMDGLVAAIMRR 264
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: UPI001FEE054D (ABC transporter permease n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI001FEE054D) HSP 1 Score: 178 bits (452), Expect = 3.330e-53 Identity = 91/162 (56.17%), Postives = 120/162 (74.07%), Query Frame = 1
Query: 4 LLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAG 489
LLG RF LEPYI YL TPKIIF PIM++ FGVG GSKIAM A+S FFP+A+S G ++PVL+RV RSF+A W + + +YLP++ P +M G+RLGLG+AI+GTLLAE KLSN+G+GY+++Q Y+ F MYA+LI +FA A+G NA++ R G
Sbjct: 90 LLGGSRFFGRALEPYIYYLGPTPKIIFFPIMIMWFGVGPGSKIAMGAVSCFFPIALSAAAGMRQIDPVLIRVGRSFRAKGWQMAQKVYLPAMRPSVMNGIRLGLGIAIIGTLLAETKLSNRGIGYLIMQAYSIFDMPRMYALLITLFAFAIGANAIVSRFGG 251
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A833GDH2_9HYPH (ABC transporter permease subunit n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GDH2_9HYPH) HSP 1 Score: 177 bits (448), Expect = 4.210e-53 Identity = 91/163 (55.83%), Postives = 123/163 (75.46%), Query Frame = 1
Query: 1 LLLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAG 489
L LG RFLA EPY+ YL TPKIIF PIM++ FGVG GSK+A+ A+S FFPVA+SV G ++PVL+RV RSF+A W + IYLP++ P++ G+RLGLGVA++GTLLAE KLSN+G+G+++IQ Y+ F MYA+L+++F +AVG NA++ RL G
Sbjct: 48 LALGRSRFLARAFEPYLYYLGPTPKIIFFPIMIMWFGVGPGSKVALGALSCFFPVALSVAAGMRQIDPVLIRVGRSFRARSWQMAWKIYLPAMRHPIINGVRLGLGVALIGTLLAETKLSNRGIGFLIIQAYSLFDMPRMYAMLVVLFVLAVGANALVGRLGG 210
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A0Q7TMJ6_9HYPH (Taurine ABC transporter n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TMJ6_9HYPH) HSP 1 Score: 178 bits (451), Expect = 5.620e-53 Identity = 93/162 (57.41%), Postives = 119/162 (73.46%), Query Frame = 1
Query: 4 LLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAG 489
LLG RF LEPYI YL TPKIIF PIM++ FGVG GSKIAM A+S FFP+A+S G + VL+RV RSF+ASQW + IYLP++ P +M G+RLGLG+AI+GTLLAE KLSN+G+GY+++Q Y+ F MYA+LI +FA A+G NA++ R G
Sbjct: 96 LLGGSRFFGRALEPYIYYLGPTPKIIFFPIMIMWFGVGPGSKIAMGAVSCFFPIALSAAAGMRQIEAVLIRVGRSFRASQWQMAMKIYLPAMRPAVMNGIRLGLGIAIIGTLLAETKLSNRGIGYLIMQAYSVFDMPRMYALLITLFAFAIGANAIVGRFGG 257
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: UPI0018D20F9A (ABC transporter permease n=2 Tax=Hyphomicrobiales TaxID=356 RepID=UPI0018D20F9A) HSP 1 Score: 177 bits (449), Expect = 6.100e-53 Identity = 92/163 (56.44%), Postives = 126/163 (77.30%), Query Frame = 1
Query: 7 LGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAGHF 495
LG+ R LAAVL+P++ LA PKI+FLPI+MV+FG+ AG KIAMAAISAFFPVAV+ + G V+P+L+RV RSF AS +V+ +YLPSI+ P++ LRL GVA++G LLAE+K+SN+GLGY++IQ YN FRTA+MYA+LI +F +A+ +NA + +
Sbjct: 76 LGVSRLLAAVLDPWVRALAPAPKIVFLPILMVVFGIDAGPKIAMAAISAFFPVAVATFGGMRGVSPILIRVVRSFDASLLQLVRLVYLPSIVVPVLGSLRLATGVALIGALLAEVKMSNRGLGYLIIQDYNAFRTAEMYALLISVFTLALAVNAALRAFGRRY 238
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A0Q3PNH1_9HYPH (ABC transmembrane type-1 domain-containing protein n=3 Tax=Bosea TaxID=85413 RepID=A0A0Q3PNH1_9HYPH) HSP 1 Score: 176 bits (445), Expect = 4.390e-52 Identity = 93/159 (58.49%), Postives = 126/159 (79.25%), Query Frame = 1
Query: 19 RFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAGHF 495
RFLAA+L+P+I LA PKIIFLP++++ FG+ AG KIAMAAIS+FFPVAV+ + G V +LV+V RSF AS +V+ IYLPSI+ PL+ LRL +GVA++G LLAE+K+SNKGLGY++IQ YN FRTA+MYA+L+++FA+A+ INAV+ + F
Sbjct: 100 RFLAAMLDPWIRALAPAPKIIFLPVLILAFGIDAGPKIAMAAISSFFPVAVATFGGMREVRRILVQVVRSFDASTLQLVRIIYLPSIVVPLLGSLRLAVGVALIGALLAEVKMSNKGLGYLIIQDYNAFRTAEMYALLLLVFALALSINAVLRAIGRRF 258
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A1Q4DDT9_9HYPH (Taurine ABC transporter n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DDT9_9HYPH) HSP 1 Score: 173 bits (438), Expect = 1.370e-51 Identity = 90/163 (55.21%), Postives = 122/163 (74.85%), Query Frame = 1
Query: 1 LLLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAG 489
LLLG RFLAA E Y+ YL TPKIIF PI+++ FGVG GSKIAM +SAFFP+A+SV G ++ VL+RV +SF+A+ W + IY+P++ P++ G+RLGLGV ++GTLLAE KLSNKG+GY++IQ Y F MYA+LI++F +A+G NA++ RL G
Sbjct: 48 LLLGGNRFLAAAFESYLYYLGPTPKIIFFPILIMWFGVGPGSKIAMGVLSAFFPIALSVAAGMREIDRVLIRVGKSFRATTWQMATKIYVPAMRHPIINGVRLGLGVGLIGTLLAETKLSNKGIGYLIIQAYTLFDMPRMYAMLIVLFVLAIGANALVGRLGG 210
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Match: A0A537KZB9_9PROT (ABC transporter permease subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KZB9_9PROT) HSP 1 Score: 173 bits (439), Expect = 3.640e-51 Identity = 90/163 (55.21%), Postives = 120/163 (73.62%), Query Frame = 1
Query: 1 LLLGMRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPVAVSVYRGTLLVNPVLVRVARSFKASQWTIVKSIYLPSIIPPLMTGLRLGLGVAIVGTLLAEIKLSNKGLGYVVIQHYNFFRTADMYAVLIIIFAIAVGINAVMDRLAG 489
+LLG R L E Y+ YL TPKIIF P+M++ FGVG GSK+AM IS FFPVA+S G +NPVL+RV RSF+AS W +V IYLP++ P + G+RLGLGVAI+GTLLAE KLSN+G+G+++I Y+ F MYA+LI++F +++G+NAV+ RL G
Sbjct: 93 ILLGSNRLLGRAFEAYLYYLGPTPKIIFFPVMIMWFGVGPGSKVAMGTISCFFPVALSAAAGMREINPVLIRVGRSFRASTWQMVTKIYLPAMRLPAINGVRLGLGVAIIGTLLAETKLSNRGIGFLIINAYSTFDMPRMYALLIVLFVLSIGVNAVVGRLGG 255 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53290.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53290.1.1 >prot_P-wetherbeei_contig53290.1.1 ID=prot_P-wetherbeei_contig53290.1.1|Name=mRNA_P-wetherbeei_contig53290.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MRRFLAAVLEPYINYLAATPKIIFLPIMMVMFGVGAGSKIAMAAISAFFPback to top mRNA from alignment at P-wetherbeei_contig53290:1..510+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53290.1.1 ID=mRNA_P-wetherbeei_contig53290.1.1|Name=mRNA_P-wetherbeei_contig53290.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig53290:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53290:1..510+ >mRNA_P-wetherbeei_contig53290.1.1 ID=mRNA_P-wetherbeei_contig53290.1.1|Name=mRNA_P-wetherbeei_contig53290.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig53290:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top |