mRNA_P-wetherbeei_contig5320.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A835Z3I4_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I4_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.340e-49 Identity = 91/147 (61.90%), Postives = 106/147 (72.11%), Query Frame = 1
Query: 10 LQELEHFVTPRQLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDLASDPCSVLPDPSDLAHGIELQ--------SAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHL 426
L ELEHFV RQLPLMV GD NS+PSSAVYEL+S + VS HPDL+ DPC VLPD S+L H + LQ SAYA V EP YTNYT +F+GTLDYIW S LRPLAV VP+ +DI +CG SMPNV ASSDHV+L A++ +
Sbjct: 500 LVELEHFVMSRQLPLMVCGDLNSEPSSAVYELISTQRVSADHPDLSQDPCHVLPDASELTHNLHLQIXXXXXXXSAYAAVTLDEPPYTNYTDSFRGTLDYIWCSAPDLRPLAVMQVPSEDDIRRCGPSMPNVAASSDHVLLCADVQV 646
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A7S2RJ55_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ55_9STRA) HSP 1 Score: 164 bits (414), Expect = 7.560e-45 Identity = 83/141 (58.87%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 10 LQELEHFVTPRQLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDLASDPCSVLPDPSD-LAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHLG 429
L ELE V PR +PL+ GDFNS PSSAVYELLS VS GHPDL D +LP + L H + L SAYA V G EP YTNYT+ F+G LDYIWYS HLRPL V VPT E IH G ++PNVQ SSDHV++ ++ LG
Sbjct: 426 LMELEQLVLPRDMPLVFCGDFNSIPSSAVYELLSTSAVSDGHPDLGEDVARILPPTLEALQHNLCLMSAYAAVTGLEPVYTNYTQVFQGVLDYIWYSGQHLRPLGVLEVPTEEAIHSVGQALPNVQYSSDHVLMSVDLQLG 566
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A6S9ETF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ETF7_HETAK) HSP 1 Score: 163 bits (413), Expect = 1.370e-44 Identity = 81/143 (56.64%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 10 LQELEHFVTPRQLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDLAS-DPCSVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHLGSI 435
+QELEHFV R LPLMV+GDFNS PSSAVYE ++ + V GHPDL S D +LP P DL H I+L SAYA V G EP YTN++ F G LDYIW++ HLRPLAVSPVP ++ G+ MPN SSDH +L ++ LG +
Sbjct: 485 MQELEHFVLSRNLPLMVVGDFNSLPSSAVYEFMAKQCVQPGHPDLVSADQHRILPSPQDLTHAIQLASAYATVQGREPPYTNHSGRFTGVLDYIWFARPHLRPLAVSPVPDLAEVEAAGEGMPNCLYSSDHALLCCDVQLGGL 627
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A7S1FRM5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRM5_9STRA) HSP 1 Score: 152 bits (385), Expect = 7.680e-41 Identity = 77/141 (54.61%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 10 LQELEHFVTPRQLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDL-ASDPCSVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHLG 429
LQELE FV R LPLM+ GDFNS P +AVY+LLS V GHPD+ ++ SVLPD L H +L S A VL EPE+TNYT FKG LDY+W+S HLRPL +P+P + K G+++P+ Q SSDH+MLI++M LG
Sbjct: 434 LQELETFVLSRNLPLMICGDFNSTPDTAVYDLLSRSSVHPGHPDVNMNEEVSVLPDVRSLIHSFQLGSVNATVLREEPEHTNYTVGFKGVLDYMWFSAQHLRPLTSAPIPDESVLKKHGEALPSTQFSSDHIMLISDMQLG 574
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A6U1PWN2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1PWN2_CYCTE) HSP 1 Score: 147 bits (371), Expect = 5.370e-40 Identity = 76/148 (51.35%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 10 LQELEHFVTPR--QLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDL-----ASDPCSVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHLGS 432
LQELE FV R QLPLM+ GDFNS P +AVY+LLS + V GHPD+ S P ++LPDP ++ H +L SAY VLG EP+ TNYT FKG LDY+WYS +LRPL+ +PVP + + G+++P+ + SSDH+ML+++M + S
Sbjct: 245 LQELETFVLSRGTQLPLMICGDFNSTPDTAVYDLLSRQTVHPGHPDVNINTDESVP-NILPDPMNITHSFQLGSAYQTVLGEEPKVTNYTTNFKGVLDYVWYSAQNLRPLSAAPVPDEATLIRHGEALPSTEFSSDHLMLLSDMQIMS 391
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A7S2PG38_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG38_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.020e-39 Identity = 79/147 (53.74%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 10 LQELEHFVTPR--QLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDL---ASDPC--SVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHLG 429
LQELE FV R LPLM+ GD NS P +AVY+LLS R V GHPD+ +D SVLPD L+H S Y+ V+G EP +TNYT FKG LDYIW+S HLRPL+ P+P E++ K G+ +P+ SSDHVMLIA+M LG
Sbjct: 461 LQELETFVMSRGSNLPLMICGDLNSTPDTAVYDLLSRRAVHPGHPDVNLKVNDDSLPSVLPDTLSLSHSFNFGSVYSTVMGEEPPHTNYTVNFKGVLDYIWFSVQHLRPLSTVPIPDEEELLKYGEGLPSTMQSSDHVMLIADMQLG 607
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A6V2A2F9_9STRA (Hypothetical protein n=5 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2A2F9_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.560e-39 Identity = 74/146 (50.68%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 10 LQELEHFVTPR--QLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDL----ASDPC-SVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHL 426
LQELE FV R LPLM+ GDFNS P +AVY+LLS + V GHPD+ A D C ++LPDP ++ H +L S Y +VLG EP+ TN+T FKG LDY+WYS +L+PL+ +P+P + + G+++P+ Q SSDHVMLI++M +
Sbjct: 487 LQELETFVLSRGTSLPLMICGDFNSTPDTAVYDLLSRQAVHPGHPDVNMPNADDSCPNILPDPMNITHSFQLMSVYNMVLGEEPKMTNFTNCFKGVLDYMWYSSHNLKPLSAAPIPDESVLTRHGEALPSTQYSSDHVMLISDMQI 632
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A7S2Y6H0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6H0_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.490e-38 Identity = 70/147 (47.62%), Postives = 99/147 (67.35%), Query Frame = 1
Query: 10 LQELEHFVTPR--QLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDLA----SDPCSVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHLGS 432
LQELE FV R LPL++ GDFNS P +AVY+LL+ + V GHPD+ + ++LPD ++H +L SAY VLG EP TN+T FKG LDYIWYS +LRPL+ +P+P + K G+++P+ + SSDH+MLI+++ + S
Sbjct: 85 LQELESFVMSRGTNLPLVICGDFNSTPDTAVYDLLARQSVHPGHPDVNVTTDDNVPAILPDAMSISHSFQLGSAYQAVLGDEPWVTNFTLNFKGVLDYIWYSAQNLRPLSAAPIPDEAQLTKHGEALPSTEYSSDHIMLISDLQVVS 231
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A7S3L629_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L629_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.770e-38 Identity = 73/145 (50.34%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 10 LQELEHFVTPR--QLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDL----ASDPCSVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHL 426
LQELE F+ R LPL++ GDFNS P +AVY+LLS + V GHPD+ D ++LPDP ++ H +L SAY VLG EP TNYT FKGTLDYIWYS +LRPL+ +P+P + + G+++P+ + SSDH+MLI++ L
Sbjct: 507 LQELESFIMSRGANLPLIICGDFNSTPDTAVYDLLSRQAVHPGHPDVNVATGDDVPNILPDPMNITHSFQLGSAYQTVLGEEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPIPDEAQLTERGEALPSTEFSSDHMMLISDFQL 651
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Match: A0A1Z5J870_FISSO (CCR4-NOT transcription complex subunit 6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J870_FISSO) HSP 1 Score: 146 bits (368), Expect = 3.160e-38 Identity = 75/145 (51.72%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 10 LQELEHFVTPR--QLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDL----ASDPCSVLPDPSDLAHGIELQSAYAVVLGAEPEYTNYTRTFKGTLDYIWYSPGHLRPLAVSPVPTPEDIHKCGDSMPNVQASSDHVMLIAEMHL 426
LQELE F+ R LPL++ GDFNS P +AVY+LLS + V GHPDL + D +VLPD ++ H +L SAY +LG EP TNYT FKGTLDYIWYS +LRPL+ +PVP E + G+++P+ + SSDH+MLI++M +
Sbjct: 480 LQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNMANSEDIPNVLPDAMNINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQI 624 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5320.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5320.4.1 >prot_P-wetherbeei_contig5320.4.1 ID=prot_P-wetherbeei_contig5320.4.1|Name=mRNA_P-wetherbeei_contig5320.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp LFRLQELEHFVTPRQLPLMVMGDFNSDPSSAVYELLSLRGVSHGHPDLASback to top mRNA from alignment at P-wetherbeei_contig5320:3017..3711- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5320.4.1 ID=mRNA_P-wetherbeei_contig5320.4.1|Name=mRNA_P-wetherbeei_contig5320.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=695bp|location=Sequence derived from alignment at P-wetherbeei_contig5320:3017..3711- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5320:3017..3711- >mRNA_P-wetherbeei_contig5320.4.1 ID=mRNA_P-wetherbeei_contig5320.4.1|Name=mRNA_P-wetherbeei_contig5320.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig5320:3017..3711- (Phaeothamnion wetherbeei SAG_119_79)back to top |