mRNA_P-wetherbeei_contig53187.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A7X1P616_9PROT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P616_9PROT) HSP 1 Score: 271 bits (694), Expect = 6.940e-89 Identity = 134/179 (74.86%), Postives = 156/179 (87.15%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVEV + +G REIVMIGHAGHPEVEGTMGQV G++LVE++ADV +L+V+D N+A+VTQTTLSVDDARAI +ALR RFPAI+ PKKDDICYATQNRQDAVK LA+ CDVLIVVGSPNSSNSNRLREVA + G+PAYM+D AADL W+EGK +GVTAGASAPEVLV+ ++AR
Sbjct: 107 TKVHVEVARTAEGGREIVMIGHAGHPEVEGTMGQVQGGIHLVETVADVAKLEVRDPGNVAYVTQTTLSVDDARAIVDALRARFPAIVAPKKDDICYATQNRQDAVKRLARECDVLIVVGSPNSSNSNRLREVAIHQGIPAYMVDQAADLDPRWIEGKKRIGVTAGASAPEVLVDQLLAR 285
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A1F4A3R0_9PROT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A3R0_9PROT) HSP 1 Score: 265 bits (676), Expect = 2.710e-86 Identity = 135/179 (75.42%), Postives = 152/179 (84.92%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVEV KM REIVMIGH GHPEVEGTMGQ A GMYLVE+ DV RL+V+D NLAFVTQTTLSVDDA+ EALRRRFP I+GPKKDDICYATQNRQDAVKALA+ CDV+IVVGSPNSSNSNRLREVA + G AYM+D+A +L+ EW+ G+S VGVTAGASAPEVLV+ V+A+
Sbjct: 100 TKVHVEVAKMRAHGREIVMIGHHGHPEVEGTMGQSAGGMYLVENPDDVARLEVRDPGNLAFVTQTTLSVDDAKLTIEALRRRFPGIMGPKKDDICYATQNRQDAVKALAQQCDVVIVVGSPNSSNSNRLREVAQHQGTAAYMVDNAGELQAEWLAGRSCVGVTAGASAPEVLVQQVVAK 278
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: UPI001988F873 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001988F873) HSP 1 Score: 265 bits (677), Expect = 2.800e-86 Identity = 134/179 (74.86%), Postives = 150/179 (83.80%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVEV KM REIVMIGH GHPEVEGTMGQ GMYLVES+ DV RL V DA+NLA+VTQTTLSVDDARAIT+AL +RFP I+GPKKDDICYATQNRQDAVK L+ CDV+IVVGSPNSSNSNRLREVAAN G+PAY++D A +++ EW+ G VGVTAGASAPEVLV V+ R
Sbjct: 102 TKVHVEVAKMRAQGREIVMIGHRGHPEVEGTMGQADGGMYLVESVDDVARLAVVDAENLAYVTQTTLSVDDARAITDALAQRFPKIVGPKKDDICYATQNRQDAVKKLSAECDVMIVVGSPNSSNSNRLREVAANAGIPAYLVDRATEVRAEWLTGCERVGVTAGASAPEVLVREVVER 280
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: UPI000557EFEF (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Ferriphaselus sp. R-1 TaxID=1485544 RepID=UPI000557EFEF) HSP 1 Score: 263 bits (673), Expect = 7.490e-86 Identity = 132/178 (74.16%), Postives = 153/178 (85.96%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIA 534
TKVH+EV + H +EI+MIGHAGHPEVEGTMGQ+ G+YLVES DV LQVKD DNLAFVTQTTLSVDDA I +AL+ RFP I+GPKKDDICYATQNRQDAVK LA+ CDV+IVVGSPNSSNSNRLREVA NLG PAY++D+AA+L+ +W+EGK VGV+AGASAPEVLV+ V+A
Sbjct: 100 TKVHLEVVRKHALSKEIIMIGHAGHPEVEGTMGQIEGGVYLVESPEDVSALQVKDEDNLAFVTQTTLSVDDASRIIDALKARFPNIVGPKKDDICYATQNRQDAVKLLAQQCDVVIVVGSPNSSNSNRLREVAKNLGTPAYLVDNAAELQPQWLEGKRHVGVSAGASAPEVLVQEVVA 277
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A401JA71_9PROT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Sulfuriferula TaxID=1778653 RepID=A0A401JA71_9PROT) HSP 1 Score: 263 bits (673), Expect = 9.960e-86 Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVH+EV KM + EI+MIGH GHPEVEGTMGQ A GMYLVE+ DV +L+VKDAD LAFVTQTTLS+DDA + AL+ RFPAI+GPKKDDICYATQNRQDAVKALA CD++IVVGSPNSSNSNRLREVA NLGV AYM+D+A +LK EW+ K+ +GVTAGASAP+VLV+ VIAR
Sbjct: 104 TKVHIEVAKMREKDLEIIMIGHKGHPEVEGTMGQSAGGMYLVETPEDVAKLEVKDADKLAFVTQTTLSIDDAARVIAALKARFPAIVGPKKDDICYATQNRQDAVKALAAQCDLVIVVGSPNSSNSNRLREVAQNLGVDAYMVDNAGELKEEWLADKTRIGVTAGASAPDVLVQEVIAR 282
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A849IHD6_9BURK (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A849IHD6_9BURK) HSP 1 Score: 263 bits (671), Expect = 1.550e-85 Identity = 131/179 (73.18%), Postives = 152/179 (84.92%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVEV +MHD +EIVMIGHAGHPEVEGTMGQ A GMYLVE+ DVE LQVK+ NLAFVTQTTLSVDDA + +AL+ RFP I+GPKKDDICYATQNRQDAVKAL+ CD++IVVGSPNSSNSNRLREVA + GV ++M+D+A +LK EW+EGK VG+TAGASAPE LV+ VI +
Sbjct: 100 TKVHVEVARMHDQGKEIVMIGHAGHPEVEGTMGQAAGGMYLVETPGDVENLQVKNPGNLAFVTQTTLSVDDAALVIDALKARFPDIVGPKKDDICYATQNRQDAVKALSDRCDLVIVVGSPNSSNSNRLREVARSRGVDSHMIDNAGELKPEWLEGKKSVGITAGASAPEELVQEVIEK 278
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A1F4D8Q1_9PROT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4D8Q1_9PROT) HSP 1 Score: 263 bits (671), Expect = 1.600e-85 Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVI 531
TKVHVEV KM + REIVMIGH GHPEVEGTMGQ A GMYLVE ADV L+V + ++LAFVTQTTLSVDDAR + EAL++RFP IIGPKKDDICYATQNRQDAVK LAK CD +IVVGSPNSSNSNRLREVA N GV AYM+D+AA+L+ EWV GK VGVTAGASAPEVLV+ VI
Sbjct: 100 TKVHVEVAKMREQGREIVMIGHQGHPEVEGTMGQSAGGMYLVEKPADVAHLKVANPNHLAFVTQTTLSVDDARVMIEALKQRFPNIIGPKKDDICYATQNRQDAVKLLAKQCDAVIVVGSPNSSNSNRLREVAQNQGVAAYMVDNAAELRPEWVAGKQRVGVTAGASAPEVLVQQVI 276
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: UPI001AD52918 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001AD52918) HSP 1 Score: 263 bits (672), Expect = 1.650e-85 Identity = 137/179 (76.54%), Postives = 150/179 (83.80%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVE+ KM + EIVMIGHAGHPEVEGTMGQ G++LVES+ADV RL V DA LA+VTQTTLSVDDA I ALRRRFPAI+GP+KDDICYATQNRQDAVKALA+ DV++VVGSPNSSNSNRLREVAAN GVPAYM+D A DL WVEG+ VGVTAGASAPEVLV VIAR
Sbjct: 100 TKVHVEIAKMREHGHEIVMIGHAGHPEVEGTMGQCEGGVHLVESVADVLRLAVADARKLAYVTQTTLSVDDAAEIVAALRRRFPAIVGPRKDDICYATQNRQDAVKALARAVDVVVVVGSPNSSNSNRLREVAANRGVPAYMVDTADDLDPAWVEGRRRVGVTAGASAPEVLVRDVIAR 278
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A258Z2G0_9PROT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=4 Tax=unclassified Hydrogenophilales TaxID=1798413 RepID=A0A258Z2G0_9PROT) HSP 1 Score: 261 bits (668), Expect = 4.870e-85 Identity = 132/179 (73.74%), Postives = 150/179 (83.80%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVEV KMHD EIVMIGH GHPEVEGT+GQ GMYLVE+ DV+ LQV + D LA+VTQTTLSVDDA + +ALR RFP+I GPKKDDICYATQNRQDAVKALA+ CDV+IVVGSP SSNSNRLREVA NLGVPAYM+D+A +++ EWV GK+ VG+TAGASAPEVLV +I R
Sbjct: 102 TKVHVEVSKMHDRGYEIVMIGHKGHPEVEGTLGQSEGGMYLVETPGDVDTLQVNNPDQLAYVTQTTLSVDDAARVVDALRARFPSITGPKKDDICYATQNRQDAVKALAQQCDVVIVVGSPTSSNSNRLREVAENLGVPAYMVDNATEIQPEWVAGKNRVGLTAGASAPEVLVRDLITR 280
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Match: A0A536SNM2_9PROT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SNM2_9PROT) HSP 1 Score: 261 bits (668), Expect = 5.530e-85 Identity = 135/179 (75.42%), Postives = 148/179 (82.68%), Query Frame = 1
Query: 1 TKVHVEVGKMHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLAFVTQTTLSVDDARAITEALRRRFPAIIGPKKDDICYATQNRQDAVKALAKHCDVLIVVGSPNSSNSNRLREVAANLGVPAYMLDDAADLKGEWVEGKSVVGVTAGASAPEVLVEAVIAR 537
TKVHVEV KM D REIVMIGH GHPEVEGTMGQ GM+LVE+ ADV RLQV+D L++VTQTTLSVDDA AI EAL+ RFPAI GPK+DDICYATQNRQDAVK +A CDV+IVVGSPNSSNSNRLREVA + G+ AYM+D AA LK EWV GK VGVTAGASAPEVLV +IAR
Sbjct: 100 TKVHVEVAKMRDAGREIVMIGHRGHPEVEGTMGQSTEGMHLVEATADVARLQVRDPLKLSYVTQTTLSVDDAAAIVEALKARFPAITGPKRDDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNSNRLREVARSRGIEAYMVDSAAQLKAEWVAGKRRVGVTAGASAPEVLVNELIAR 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53187.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53187.1.1 >prot_P-wetherbeei_contig53187.1.1 ID=prot_P-wetherbeei_contig53187.1.1|Name=mRNA_P-wetherbeei_contig53187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp MHDGRREIVMIGHAGHPEVEGTMGQVASGMYLVESIADVERLQVKDADNLback to top mRNA from alignment at P-wetherbeei_contig53187:2..538- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53187.1.1 ID=mRNA_P-wetherbeei_contig53187.1.1|Name=mRNA_P-wetherbeei_contig53187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig53187:2..538- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53187:2..538- >mRNA_P-wetherbeei_contig53187.1.1 ID=mRNA_P-wetherbeei_contig53187.1.1|Name=mRNA_P-wetherbeei_contig53187.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig53187:2..538- (Phaeothamnion wetherbeei SAG_119_79)back to top |