mRNA_P-wetherbeei_contig5316.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: D7FW77_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW77_ECTSI) HSP 1 Score: 147 bits (372), Expect = 3.070e-36 Identity = 103/244 (42.21%), Postives = 138/244 (56.56%), Query Frame = 2
Query: 323 LDAFGMLCTTRALLETV---SSSAATLGRYDGSIRVCARVIEAAIA------EKKNAIAAALERSSAPSPLASSRGRP---------------SPPPSVGHIPTEDGLQPVSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDD 982
L ++ L R LL+ + S LGRY S+ +C ++ +I EKK + + S +SS G+ SP S+ +PT PD L+ FD ++G AKRAL+EH VLPL L E R ++F G+RS +N+LL GPPGTGKTT+A+AA+ A A+F+SV PSS+LSKYQGESER L LF +A++ PSV+FLDE DA+APSRDA DD
Sbjct: 28 LISYDSLVKARGLLDLIFELPSFEMELGRYSASLELCGSILNRSIRRRRHALEKKPPVRTRGHNIPSQSTSSSSGGQAAEHKNGSFAGAAPVGSPTRSMSTMPTA-----WEPDEALT------FDSLVGNEAAKRALFEHVVLPLKLSEEARGSLFVGLRSSGNNVLLHGPPGTGKTTIAQAASQEAGAAFYSVVPSSILSKYQGESERVLHQLFDDAKKTKPSVIFLDELDALAPSRDAQDD 260
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A836CAZ1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAZ1_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.880e-34 Identity = 82/149 (55.03%), Postives = 104/149 (69.80%), Query Frame = 2
Query: 563 EDGLQPVSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
+D LQ +P A FD ++G K+AL E+ VLPL LP SIR A+F G R+ + N+LL+GPPGTGKT+LA AAA A A F+++SPSS+LSKYQGESER LRA+FA+AR P+VVFLDE DA+ SRD +D+Q RR E
Sbjct: 146 DDELQGDAPQVQAPTISATRFDSIVGCEGGKQALRENVVLPLALPPSIRDAIFVGPRAASANVLLYGPPGTGKTSLAEAAAGEAGARFYALSPSSILSKYQGESERMLRAVFAQARAAPPAVVFLDEIDALGCSRDGCEDLQGRRLLAE 294
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A7S1UDK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDK2_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.870e-24 Identity = 69/143 (48.25%), Postives = 90/143 (62.94%), Query Frame = 2
Query: 581 VSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
V + L+ G G +D ++G DAKR L E VLP ++R +FTG+R+ A +LL+GPPGTGKT LARA +A +FFSVS +S+ SKY G+ ER +RALF ARR AP+VVF DE DA+ R + SRR E
Sbjct: 64 VLAEMLVQGGGIT-WDQIVGLEDAKRVLQESVVLP-----ALRPDLFTGLRAPARGVLLFGPPGTGKTLLARAVSAETSYTFFSVSAASLTSKYVGDGERLMRALFEVARRHAPAVVFFDEVDALLAKRGDGEHEASRRMKTE 200
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A7S1XWM3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWM3_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.320e-23 Identity = 69/143 (48.25%), Postives = 90/143 (62.94%), Query Frame = 2
Query: 581 VSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
V + L+ G G +D ++G DAKR L E VLP ++R +FTG+R+ A +LL+GPPGTGKT LARA +A +FFSVS +S+ SKY G+ ER +RALF ARR AP+VVF DE DA+ R + SRR E
Sbjct: 64 VLAEMLVQGGGIT-WDQIVGLEDAKRVLQESVVLP-----ALRPDLFTGLRAPARGVLLFGPPGTGKTLLARAVSAETSYTFFSVSAASLTSKYVGDGERLMRALFEVARRHAPAVVFFDEVDALLAKRGDGEHEASRRMKTE 200
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A139ATE5_GONPJ (AAA-domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139ATE5_GONPJ) HSP 1 Score: 111 bits (278), Expect = 1.950e-23 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 2
Query: 623 FDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
+D ++G AKRAL E VLP S+R +FTG+RS A +LL+GPPGTGKT LARA A+ A ++FF++S SS+ SK+ GESE+ +RALFA AR+ PSV+F+DE D+I R + SRR E
Sbjct: 18 WDDIVGLDSAKRALKEIIVLP-----SLRPELFTGLRSPAKGVLLFGPPGTGKTMLARAVASEAHSTFFAISASSLTSKWVGESEKMVRALFALARQMQPSVIFIDEVDSILTERRENEHDASRRLKTE 141
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A2K1JUM3_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JUM3_PHYPA) HSP 1 Score: 115 bits (287), Expect = 4.050e-23 Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 2
Query: 560 TEDGLQP----VSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
T G++P V + ++ + A +D + G A AK+AL E +LP S+R +F G+R A LLL+GPPG GKT LA+A A+ + A+FFS+S SS+ SK+ GE E+ ++ALFA AR R PSV+F+DE D+I SR A ++ SRR E
Sbjct: 258 TVPGVEPKLVEVIENEIIDRSPAVKWDDIAGLAKAKQALLEMVILP-----SVRSDIFQGLRKPAKGLLLYGPPGNGKTMLAKAVASESAATFFSISASSLTSKWVGEGEKLVKALFAVARARQPSVIFIDEIDSIMSSRSANENEASRRLKTE 406
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A1R2CBX1_9CILI (AAA domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CBX1_9CILI) HSP 1 Score: 113 bits (282), Expect = 4.940e-23 Identity = 66/149 (44.30%), Postives = 94/149 (63.09%), Query Frame = 2
Query: 563 EDGLQPVSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
ED L+ + +L + + +D + G A+AK L+E +LP P +FTGIR+ +LL+GPPGTGKT LA+A A+ + A FFS+S SS+ SK+ GE+E+ +RALF A+R+ PSVVF+DE D+I SR + SRR E
Sbjct: 127 EDSLEAMIETEILDTSQSMKWDDISGLANAKAMLHEAVILPSQYPN-----IFTGIRAPPKGILLFGPPGTGKTLLAKALASQSSACFFSISASSLTSKFYGEAEKLVRALFTVAKRKQPSVVFIDEVDSILSSRGQGEHEASRRVKTE 270
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A7S3WPH7_EMIHU (Vesicle-fusing ATPase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WPH7_EMIHU) HSP 1 Score: 113 bits (282), Expect = 8.360e-23 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 2
Query: 623 FDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRR 997
+D V G ADAK AL+E AVLP+ P+ +FTG R +LL+GPPGTGK+ LA+A A A+FFSVS S ++SK+ GESE+ +RALF A RR P+++F+DE DA+A +R + SRR
Sbjct: 163 WDDVAGLADAKAALHEAAVLPIRFPD-----LFTGARQPWRGVLLYGPPGTGKSHLAKAVATEVAATFFSVSSSDLVSKWVGESEKQVRALFESAERRKPAIIFIDEVDALASARSENEAEASRR 282
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A653BRF5_CALMS (AAA domain-containing protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653BRF5_CALMS) HSP 1 Score: 108 bits (270), Expect = 8.910e-23 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 2
Query: 590 DSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
D ++ G A ++ ++G AK+AL E +LP S+R +FTG+R+ A LLL+GPPG GKT LARA A A+FFS+S +S+ SKY G+ E+ +RALFA AR PS++F+DE D++ R + SRR E
Sbjct: 76 DEIVEGGPAVQWEDIVGQDTAKQALQEMVILP-----SLRPELFTGLRTPARGLLLFGPPGNGKTLLARAVATECQATFFSISAASLTSKYVGDGEKMVRALFAIARELQPSIIFIDEVDSLLSERSNSEHEASRRLKTE 210
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Match: A0A1R2B9L6_9CILI (AAA domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B9L6_9CILI) HSP 1 Score: 112 bits (279), Expect = 1.200e-22 Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 2
Query: 557 PTEDGLQPVSPDSLLSGTGARGFDGVIGAADAKRALYEHAVLPLHLPESIRKAVFTGIRSGAHNLLLWGPPGTGKTTLARAAAASACASFFSVSPSSVLSKYQGESERTLRALFAEARRRAPSVVFLDECDAIAPSRDAIDDVQSRRWAIE 1009
P++D L+ + +L + + ++ + G A+AK L+E +LP P +FTGIR+ +LL+GPPGTGKT LA+A A+ + A FFS+S SS+ SK+ GE+E+ +RALF A+R+ PSVVF+DE D+I SR + SRR E
Sbjct: 125 PSDDPLEAMIETEILDTSQSMKWEDISGLANAKAMLHEAVILPSQYPN-----IFTGIRAPPKGILLFGPPGTGKTLLAKALASQSSACFFSISASSLTSKFYGEAEKLVRALFTVAKRKQPSVVFIDEVDSILSSRGQGEHEASRRVKTE 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5316.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5316.1.1 >prot_P-wetherbeei_contig5316.1.1 ID=prot_P-wetherbeei_contig5316.1.1|Name=mRNA_P-wetherbeei_contig5316.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp MANSHSVYLFAGGAAACHYLPPPSAAAATAVATTEWTGRDGRLLAELLLQback to top mRNA from alignment at P-wetherbeei_contig5316:76..3875+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5316.1.1 ID=mRNA_P-wetherbeei_contig5316.1.1|Name=mRNA_P-wetherbeei_contig5316.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3800bp|location=Sequence derived from alignment at P-wetherbeei_contig5316:76..3875+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5316:76..3875+ >mRNA_P-wetherbeei_contig5316.1.1 ID=mRNA_P-wetherbeei_contig5316.1.1|Name=mRNA_P-wetherbeei_contig5316.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig5316:76..3875+ (Phaeothamnion wetherbeei SAG_119_79)back to top |