mRNA_P-wetherbeei_contig53159.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53159.1.1
Unique NamemRNA_P-wetherbeei_contig53159.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: UPI001C3CEF99 (glycosyltransferase family 2 protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3CEF99)

HSP 1 Score: 191 bits (486), Expect = 2.370e-58
Identity = 99/158 (62.66%), Postives = 114/158 (72.15%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            +SVVIPAHNEA  I  T+  L  TL  A I HEIVVVDDHSSD T A+V   A      R+V N + GGFGMAVR GLEA RGDA+ ++MADASD P+DLV F++ ME  G +CVFGSRFAPGG V DYPRLKL LNR+AN  IR++F   YDD TNA
Sbjct:    3 VSVVIPAHNEADGITPTVTALHDTLAAAGIDHEIVVVDDHSSDRTAAVVTGLAERIAEVRMVQNHASGGFGMAVRRGLEAFRGDAVAIYMADASDSPEDLVMFIRTMEVRGTDCVFGSRFAPGGEVHDYPRLKLLLNRVANTGIRVLFGLRYDDMTNA 160          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A1Z9QK09_9PLAN (Cell wall biosynthesis glycosyltransferase n=4 Tax=Bacteria TaxID=2 RepID=A0A1Z9QK09_9PLAN)

HSP 1 Score: 169 bits (428), Expect = 1.710e-49
Identity = 89/162 (54.94%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    7 PAPALSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            P   LSVVIPA +EAGCI  T++ L  TL+   I H+I+VVDDHSSD T  I++E A    A   + N+S+ GFG AV CG+ AA+GDA+ V MAD SDD +D+VR+ + +   G +CVFGSRF  GG VIDYP LKL LNRL N  IR++FR   +DTTNA
Sbjct:   10 PLSLLSVVIPAMDEAGCIASTIEHLHLTLKLKSIPHQIIVVDDHSSDSTWDILQEMASSNDALSPIKNDSESGFGRAVCCGINAAKGDAIVVMMADESDDSNDVVRYWELLNE-GWDCVFGSRFMKGGGVIDYPWLKLRLNRLVNHLIRVLFRIRLNDTTNA 170          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A7C4C118_9BACT (Glycosyltransferase family 2 protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C4C118_9BACT)

HSP 1 Score: 168 bits (425), Expect = 2.670e-49
Identity = 89/158 (56.33%), Postives = 106/158 (67.09%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            LSVVIPA NE GCI  TL+ L   L    I HEI+VVDD S D T  +VRE AR+ PA  L  NE + GFGMAVRCGL  A GDA+ + MAD SD P+DLV   + +   G +CVFGSRF  G RVIDYP  KL +NRLAN  I+++F   ++DTTNA
Sbjct:    3 LSVVIPAQNEEGCIAETLRSLAAALRAEAIPHEIIVVDDGSQDRTAEVVREVAREHPAILLETNEGRHGFGMAVRCGLRRATGDAVAIMMADLSDSPEDLVACYRKLAE-GYDCVFGSRFIRGSRVIDYPPHKLVINRLANLFIQIIFGLRFNDTTNA 159          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A1G0ZEP2_9BACT (Family 2 glycosyl transferase n=1 Tax=Lentisphaerae bacterium GWF2_52_8 TaxID=1798575 RepID=A0A1G0ZEP2_9BACT)

HSP 1 Score: 166 bits (420), Expect = 1.280e-48
Identity = 89/159 (55.97%), Postives = 106/159 (66.67%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAA-RLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            LS +IPAHNE GC+  T+  L  TLE A I+HEI++V+DHSSD TG I +      P   R V N    GFG AVR GL    GDA+ +FMAD SD PDDLV+F + +E  G +CVFGSRF  GG+ IDYP LKL LNRLAN  IR +F  GY+D TNA
Sbjct:    3 LSAIIPAHNEEGCLEETVSGLHRTLESAGISHEILIVNDHSSDSTGEIGKRLELKYPGILRCVDNGMPCGFGFAVRTGLSLFEGDAVSLFMADNSDSPDDLVKFFRKLEE-GFDCVFGSRFGKGGKTIDYPPLKLMLNRLANPFIRTLFMIGYNDITNA 160          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A838V046_9ACTN (Glycosyltransferase family 2 protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A838V046_9ACTN)

HSP 1 Score: 166 bits (421), Expect = 1.550e-48
Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            LSVVIPA NE G +  T++ L  TLE  ++ +EIVVVDD S D T A+V     + P  R+  +  + GFGMA+R GL+  +GDA+ +FMADASDDP DLVR+ + +E  G +C FGSRF PG R+ DYPRLK   NRLAN  IR++FR  Y+DTTNA
Sbjct:    9 LSVVIPAQNEEGSVGATVEGLVATLEREDVDYEIVVVDDDSEDSTAAVVGAIGAENPRVRVHRSHYERGFGMAIRAGLDVFQGDAVAIFMADASDDPKDLVRYHRLLEE-GWDCAFGSRFMPGARIYDYPRLKYIFNRLANQFIRVLFRHRYNDTTNA 165          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A2V8JMH8_9BACT (Glycosyltransferase family 2 protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8JMH8_9BACT)

HSP 1 Score: 166 bits (421), Expect = 1.640e-48
Identity = 83/158 (52.53%), Postives = 106/158 (67.09%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            L VVIPAHNE   I  T+Q LR  L    + HEI++++DHS+DGT A++       P+ R + N    GFG+AVRCGLE   GDA+ ++MADASD P+DLV F + M   G +CVFGSRF+ GGR++DYP  KL  NRL N  +RL+FR  YDD TNA
Sbjct:    3 LCVVIPAHNERENIEPTVQELRRCLASESVTHEILIINDHSTDGTEAVLVRLCNKFPSIRYLNNPYSPGFGLAVRCGLENFTGDAVALYMADASDRPEDLVTFFRTMMIEGVDCVFGSRFSKGGRLVDYPFPKLIFNRLGNHFVRLLFRLRYDDVTNA 160          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A7V9I1I6_9BACT (Glycosyltransferase family 2 protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9I1I6_9BACT)

HSP 1 Score: 166 bits (419), Expect = 2.210e-48
Identity = 87/161 (54.04%), Postives = 108/161 (67.08%), Query Frame = 1
Query:   10 APALSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            AP LS+VIPAHNEA  I  T++ L +TL  A I  EIVVV+DHS+DGTG  V       P  R V N   GGFG AV  G EA  GDA+C+ MADA+DDP D+V + + + + G +CVFGSRF PG +V+DYP  K  +NRLAN  IR++F  G +DTTNA
Sbjct:    2 APTLSIVIPAHNEAEGITPTVRALASTLRAARIPFEIVVVNDHSTDGTGPAVDGLRAQNPEVRRVDNPRGGGFGHAVVAGFEACSGDAVCIVMADAADDPRDVVTYYRTLVQ-GYDCVFGSRFVPGAKVVDYPSHKWLMNRLANTFIRVLFGLGLNDTTNA 161          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A1G0Z9K5_9BACT (Glyco_trans_2-like domain-containing protein n=3 Tax=Lentisphaerae TaxID=256845 RepID=A0A1G0Z9K5_9BACT)

HSP 1 Score: 165 bits (418), Expect = 2.420e-48
Identity = 86/157 (54.78%), Postives = 108/157 (68.79%), Query Frame = 1
Query:   22 SVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            SVVIPAHNE G I  TL++L   L+      E+VVV DH SD T  I+ EF+R+    R V N+ + GFGMAVR GL+  +GDA+ ++MADASD PDDL ++ + +E  GAECVFGSRF  G R++DYPR K  LNR  N  IR+MFR G +DTTNA
Sbjct:    4 SVVIPAHNEEGVIKDTLEKLVGKLKEESFDFELVVVADHCSDRTEGILEEFSRNDSRIRWVRNKEKAGFGMAVRAGLDEFKGDAVAIYMADASDSPDDLCKYFRKIEG-GAECVFGSRFIKGSRIVDYPRHKYLLNRFVNWLIRIMFRHGLNDTTNA 159          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0A1F3Y325_9PROT (Family 2 glycosyl transferase n=1 Tax=Bdellovibrionales bacterium RIFOXYD1_FULL_53_11 TaxID=1797403 RepID=A0A1F3Y325_9PROT)

HSP 1 Score: 164 bits (414), Expect = 1.160e-47
Identity = 85/158 (53.80%), Postives = 103/158 (65.19%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            LSVVIPAHNE G I GT+  L   L    I HEI+V++D+SSDGT A +    +  P  R + N    GFG AVRCGL    GDA  +FMAD+SD P+DLV FV+ ME    +CVFGSRF  GGR IDYP  KL +NRLAN  I+L+F   ++D TNA
Sbjct:    3 LSVVIPAHNEEGAIDGTITSLHAILSKESIDHEILVINDNSSDGTEAKLLALEKSIPPLRHINNRPPNGFGFAVRCGLNNFTGDAAAIFMADSSDRPEDLVAFVRVMESEQVDCVFGSRFMKGGRTIDYPLPKLLINRLANTFIQLLFGLRFNDVTNA 160          
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Match: A0LBL8_MAGMM (Glycosyl transferase, family 2 n=1 Tax=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) TaxID=156889 RepID=A0LBL8_MAGMM)

HSP 1 Score: 164 bits (414), Expect = 2.260e-47
Identity = 82/158 (51.90%), Postives = 110/158 (69.62%), Query Frame = 1
Query:   19 LSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDGTGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADASDDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAIRLMFRSGYDDTTNA 492
            LSV+IP HNE GCI  T+++L   L+   IAHEI+V++D+SSD TG I+       P  R++ N    GFG A+R GL A  G+A+ ++MADASD P+DLVRF + ++  G +CVFG+RF  GGRV +YP  KL LNRL N  IRL+ R+GY+DT+NA
Sbjct:   20 LSVIIPTHNEEGCIQSTVEKLIAVLQAESIAHEILVINDNSSDRTGEILVAMTPYCPTMRVINNTPPNGFGFAIRQGLLAFNGEAVALYMADASDAPEDLVRFYRKLQE-GYDCVFGNRFTKGGRVYNYPWPKLVLNRLGNLFIRLLLRTGYNDTSNA 176          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53159.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3CEF992.370e-5862.66glycosyltransferase family 2 protein n=1 Tax=Milto... [more]
A0A1Z9QK09_9PLAN1.710e-4954.94Cell wall biosynthesis glycosyltransferase n=4 Tax... [more]
A0A7C4C118_9BACT2.670e-4956.33Glycosyltransferase family 2 protein n=1 Tax=Bryob... [more]
A0A1G0ZEP2_9BACT1.280e-4855.97Family 2 glycosyl transferase n=1 Tax=Lentisphaera... [more]
A0A838V046_9ACTN1.550e-4853.80Glycosyltransferase family 2 protein n=1 Tax=Solir... [more]
A0A2V8JMH8_9BACT1.640e-4852.53Glycosyltransferase family 2 protein n=1 Tax=Acido... [more]
A0A7V9I1I6_9BACT2.210e-4854.04Glycosyltransferase family 2 protein n=1 Tax=Acido... [more]
A0A1G0Z9K5_9BACT2.420e-4854.78Glyco_trans_2-like domain-containing protein n=3 T... [more]
A0A1F3Y325_9PROT1.160e-4753.80Family 2 glycosyl transferase n=1 Tax=Bdellovibrio... [more]
A0LBL8_MAGMM2.260e-4751.90Glycosyl transferase, family 2 n=1 Tax=Magnetococc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53159contigP-wetherbeei_contig53159:1..492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267535.KB906767_gene957
PFAMsGlycos_transf_2
Model size492
Max annot lvl57723|Acidobacteria
KEGG rclassRC00005
KEGG koko:K00721
KEGG ReactionR01009
KEGG Pathwayko00510,ko01100,map00510,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue3e-48
EggNOG OGsCOG1215@1|root,COG1215@2|Bacteria,3Y6P7@57723|Acidobacteria
EC2.4.1.83
DescriptionGlycosyl transferase family 2
Cds size492
COG categoryM
CAZyGT2
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186796.1942782-CDS-P-wetherbeei_contig53159:0..4921683186796.1942782-CDS-P-wetherbeei_contig53159:0..492Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53159 1..492 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53159.1.1prot_P-wetherbeei_contig53159.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53159 1..492 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53159.1.1

>prot_P-wetherbeei_contig53159.1.1 ID=prot_P-wetherbeei_contig53159.1.1|Name=mRNA_P-wetherbeei_contig53159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp
MTPAPALSVVIPAHNEAGCILGTLQRLRTTLEGAEIAHEIVVVDDHSSDG
TGAIVREFARDAPAARLVVNESQGGFGMAVRCGLEAARGDALCVFMADAS
DDPDDLVRFVQAMERTGAECVFGSRFAPGGRVIDYPRLKLALNRLANAAI
RLMFRSGYDDTTNA
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mRNA from alignment at P-wetherbeei_contig53159:1..492-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53159.1.1 ID=mRNA_P-wetherbeei_contig53159.1.1|Name=mRNA_P-wetherbeei_contig53159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig53159:1..492- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCCCGCGCCCGCCCTCTCGGTGGTGATCCCCGCCCACAACGAGGC GGGGTGCATCCTGGGCACCCTCCAACGCCTGCGCACCACGCTGGAGGGGG CGGAGATCGCGCACGAGATCGTGGTCGTGGACGACCACTCGAGCGACGGC ACCGGGGCCATCGTGCGCGAGTTCGCCCGTGACGCGCCGGCCGCCCGCCT CGTGGTCAACGAGAGCCAGGGTGGCTTCGGCATGGCGGTGCGGTGCGGCC TCGAGGCGGCCCGCGGCGACGCCCTGTGCGTGTTCATGGCCGATGCCTCC GACGATCCGGACGACCTCGTGCGCTTCGTCCAGGCCATGGAGCGCACGGG AGCCGAGTGCGTGTTCGGCTCGCGCTTTGCTCCCGGGGGGCGGGTGATCG ACTACCCGCGCCTCAAGCTGGCCCTGAACCGCCTCGCCAACGCCGCAATC CGGCTGATGTTCCGCAGCGGCTACGACGACACCACCAACGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53159:1..492-

>mRNA_P-wetherbeei_contig53159.1.1 ID=mRNA_P-wetherbeei_contig53159.1.1|Name=mRNA_P-wetherbeei_contig53159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig53159:1..492- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCCCGCGCCCGCCCTCTCGGTGGTGATCCCCGCCCACAACGAGGC
GGGGTGCATCCTGGGCACCCTCCAACGCCTGCGCACCACGCTGGAGGGGG
CGGAGATCGCGCACGAGATCGTGGTCGTGGACGACCACTCGAGCGACGGC
ACCGGGGCCATCGTGCGCGAGTTCGCCCGTGACGCGCCGGCCGCCCGCCT
CGTGGTCAACGAGAGCCAGGGTGGCTTCGGCATGGCGGTGCGGTGCGGCC
TCGAGGCGGCCCGCGGCGACGCCCTGTGCGTGTTCATGGCCGATGCCTCC
GACGATCCGGACGACCTCGTGCGCTTCGTCCAGGCCATGGAGCGCACGGG
AGCCGAGTGCGTGTTCGGCTCGCGCTTTGCTCCCGGGGGGCGGGTGATCG
ACTACCCGCGCCTCAAGCTGGCCCTGAACCGCCTCGCCAACGCCGCAATC
CGGCTGATGTTCCGCAGCGGCTACGACGACACCACCAACGCC
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